Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm16510-201ENSMUST00000153501 249 ntBASIC2.78□□□□□ -1.96
Trim28Q62318 Gm24908-201ENSMUST00000157294 127 ntBASIC2.78□□□□□ -1.96
Trim28Q62318 Gm24769-201ENSMUST00000158506 129 ntBASIC2.78□□□□□ -1.96
Trim28Q62318 Gm22943-201ENSMUST00000158564 76 ntBASIC2.78□□□□□ -1.96
Trim28Q62318 Mir7667-201ENSMUST00000183866 63 ntBASIC2.78□□□□□ -1.96
Trim28Q62318 Mir6997-201ENSMUST00000184313 71 ntBASIC2.78□□□□□ -1.96
Trim28Q62318 Mir3969-201ENSMUST00000197106 92 ntBASIC2.78□□□□□ -1.96
Trim28Q62318 Gm22443-201ENSMUST00000082890 107 ntBASIC2.78□□□□□ -1.96
Trim28Q62318 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.78□□□□□ -1.96
Trim28Q62318 Gm24098-201ENSMUST00000102075 109 ntBASIC2.77□□□□□ -1.97
Trim28Q62318 Gm25381-201ENSMUST00000102078 109 ntBASIC2.77□□□□□ -1.97
Trim28Q62318 Gm24582-201ENSMUST00000103967 103 ntBASIC2.77□□□□□ -1.97
Trim28Q62318 Gm22105-201ENSMUST00000116734 116 ntBASIC2.77□□□□□ -1.97
Trim28Q62318 Gm26345-201ENSMUST00000157534 120 ntBASIC2.77□□□□□ -1.97
Trim28Q62318 Mir1951-201ENSMUST00000157981 89 ntBASIC2.77□□□□□ -1.97
Trim28Q62318 Gm22429-201ENSMUST00000158553 130 ntBASIC2.77□□□□□ -1.97
Trim28Q62318 Gm27793-201ENSMUST00000183405 76 ntBASIC2.77□□□□□ -1.97
Trim28Q62318 Mir186-201ENSMUST00000083497 71 ntBASIC2.77□□□□□ -1.97
Trim28Q62318 Mir222-201ENSMUST00000083537 79 ntBASIC2.77□□□□□ -1.97
Trim28Q62318 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trim28Q62318 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Snord64-201ENSMUST00000104003 67 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm26077-201ENSMUST00000104064 123 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm23202-201ENSMUST00000104376 129 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm22151-201ENSMUST00000116963 58 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm14536-201ENSMUST00000118324 138 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm15027-201ENSMUST00000120922 138 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm15861-201ENSMUST00000120979 339 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm25945-201ENSMUST00000122484 135 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm16328-201ENSMUST00000126985 196 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm23048-201ENSMUST00000157237 129 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm23589-201ENSMUST00000157660 105 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm16584-201ENSMUST00000159267 189 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm7592-201ENSMUST00000160674 627 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trim28Q62318 Gm29604-201ENSMUST00000187176 163 ntBASIC2.76□□□□□ -1.97
Trim28Q62318 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.76□□□□□ -1.97
Trim28Q62318 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trim28Q62318 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trim28Q62318 Gm22490-201ENSMUST00000157188 119 ntBASIC2.75□□□□□ -1.97
Trim28Q62318 Gm24478-201ENSMUST00000157439 158 ntBASIC2.75□□□□□ -1.97
Trim28Q62318 Gm22612-201ENSMUST00000158293 101 ntBASIC2.75□□□□□ -1.97
Trim28Q62318 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trim28Q62318 Trbv18-201ENSMUST00000194256 294 ntBASIC2.75□□□□□ -1.97
Trim28Q62318 Gm43898-201ENSMUST00000204456 424 ntBASIC2.75□□□□□ -1.97
Trim28Q62318 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.75□□□□□ -1.97
Trim28Q62318 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.75□□□□□ -1.97
Trim28Q62318 Gm26135-201ENSMUST00000101993 72 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Gm16355-201ENSMUST00000128606 231 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Gm22850-201ENSMUST00000157714 82 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Gm23080-201ENSMUST00000157846 103 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Gm24900-201ENSMUST00000158128 134 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Gm24056-201ENSMUST00000158617 146 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Mir1936-201ENSMUST00000158699 93 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Gm24878-201ENSMUST00000158782 104 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Gm26160-201ENSMUST00000158965 63 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Gm24388-201ENSMUST00000177872 107 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Snord50b-201ENSMUST00000178497 72 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Mir7026-201ENSMUST00000184384 67 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trim28Q62318 Mir3068-202ENSMUST00000197755 79 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.74□□□□□ -1.97
Trim28Q62318 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.74□□□□□ -1.97
Trim28Q62318 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trim28Q62318 Gm6954-201ENSMUST00000117416 225 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Gm11644-201ENSMUST00000119735 150 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Gm26091-201ENSMUST00000122704 82 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Gm27396-201ENSMUST00000157708 58 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Gm24877-201ENSMUST00000158779 116 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Gm23476-201ENSMUST00000158881 274 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Gm37918-201ENSMUST00000192071 120 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Gm25820-202ENSMUST00000197479 128 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Gm43512-201ENSMUST00000198495 176 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Gm42739-201ENSMUST00000200687 226 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Gm44459-201ENSMUST00000203926 160 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Gm19118-201ENSMUST00000222554 98 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Gm22299-201ENSMUST00000082663 136 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.73□□□□□ -1.97
Trim28Q62318 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trim28Q62318 Gm22713-201ENSMUST00000116895 130 ntBASIC2.72□□□□□ -1.97
Trim28Q62318 Gm6444-201ENSMUST00000119611 458 ntBASIC2.72□□□□□ -1.97
Trim28Q62318 Gm24747-201ENSMUST00000157835 87 ntBASIC2.72□□□□□ -1.97
Trim28Q62318 Gm22382-201ENSMUST00000158185 130 ntBASIC2.72□□□□□ -1.97
Trim28Q62318 Gm26406-201ENSMUST00000158503 124 ntBASIC2.72□□□□□ -1.97
Trim28Q62318 Gm24842-201ENSMUST00000158681 54 ntBASIC2.72□□□□□ -1.97
Trim28Q62318 Gm25646-201ENSMUST00000178527 79 ntBASIC2.72□□□□□ -1.97
Trim28Q62318 Gm25253-201ENSMUST00000179958 107 ntBASIC2.72□□□□□ -1.97
Trim28Q62318 Mir6406-201ENSMUST00000183592 120 ntBASIC2.72□□□□□ -1.97
Trim28Q62318 Gm44555-201ENSMUST00000209008 148 ntBASIC2.72□□□□□ -1.97
Trim28Q62318 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.72□□□□□ -1.97
Trim28Q62318 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Trim28Q62318 Gm22950-201ENSMUST00000082776 107 ntBASIC2.72□□□□□ -1.97
Trim28Q62318 Snord61-201ENSMUST00000083176 71 ntBASIC2.72□□□□□ -1.97
Trim28Q62318 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trim28Q62318 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
Trim28Q62318 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.71□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms