Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cln3Q61124 Mir8096-201ENSMUST00000184526 127 ntBASIC3.34□□□□□ -1.87
Cln3Q61124 Gm44526-201ENSMUST00000204664 121 ntBASIC3.34□□□□□ -1.87
Cln3Q61124 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.34□□□□□ -1.87
Cln3Q61124 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.34□□□□□ -1.87
Cln3Q61124 Gm26326-201ENSMUST00000083070 129 ntBASIC3.34□□□□□ -1.87
Cln3Q61124 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Cln3Q61124 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cln3Q61124 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cln3Q61124 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
Cln3Q61124 AC153966.1-201ENSMUST00000220106 3764 ntBASIC3.33□□□□□ -1.88
Cln3Q61124 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC3.33□□□□□ -1.88
Cln3Q61124 Gm27446-201ENSMUST00000183963 89 ntBASIC3.33□□□□□ -1.88
Cln3Q61124 Gm44491-201ENSMUST00000196794 96 ntBASIC3.33□□□□□ -1.88
Cln3Q61124 Gm35736-201ENSMUST00000203681 313 ntBASIC3.33□□□□□ -1.88
Cln3Q61124 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.33□□□□□ -1.88
Cln3Q61124 Snora70-201ENSMUST00000083047 137 ntBASIC3.33□□□□□ -1.88
Cln3Q61124 Mir184-201ENSMUST00000083662 69 ntBASIC3.33□□□□□ -1.88
Cln3Q61124 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cln3Q61124 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.33□□□□□ -1.88
Cln3Q61124 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cln3Q61124 Gm22674-201ENSMUST00000104413 131 ntBASIC3.32□□□□□ -1.88
Cln3Q61124 Gm14671-201ENSMUST00000121790 262 ntBASIC3.32□□□□□ -1.88
Cln3Q61124 Gm22515-201ENSMUST00000158273 305 ntBASIC3.32□□□□□ -1.88
Cln3Q61124 Rnu7-201ENSMUST00000158458 62 ntBASIC3.32□□□□□ -1.88
Cln3Q61124 Gm27698-201ENSMUST00000184060 249 ntBASIC3.32□□□□□ -1.88
Cln3Q61124 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.32□□□□□ -1.88
Cln3Q61124 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cln3Q61124 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.32□□□□□ -1.88
Cln3Q61124 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cln3Q61124 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.31□□□□□ -1.88
Cln3Q61124 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cln3Q61124 Gm14674-201ENSMUST00000117816 342 ntBASIC3.31□□□□□ -1.88
Cln3Q61124 Gm25270-201ENSMUST00000122606 138 ntBASIC3.31□□□□□ -1.88
Cln3Q61124 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.31□□□□□ -1.88
Cln3Q61124 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC3.31□□□□□ -1.88
Cln3Q61124 Gm43239-201ENSMUST00000200131 201 ntBASIC3.31□□□□□ -1.88
Cln3Q61124 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.31□□□□□ -1.88
Cln3Q61124 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC3.31□□□□□ -1.88
Cln3Q61124 Snord7-201ENSMUST00000083781 97 ntBASIC3.31□□□□□ -1.88
Cln3Q61124 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.31□□□□□ -1.88
Cln3Q61124 AC127302.3-201ENSMUST00000215480 2791 ntBASIC3.31□□□□□ -1.88
Cln3Q61124 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Cln3Q61124 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cln3Q61124 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.3□□□□□ -1.88
Cln3Q61124 Mir293-201ENSMUST00000104841 80 ntBASIC3.3□□□□□ -1.88
Cln3Q61124 Gm6954-201ENSMUST00000117416 225 ntBASIC3.3□□□□□ -1.88
Cln3Q61124 Gm25280-201ENSMUST00000157269 101 ntBASIC3.3□□□□□ -1.88
Cln3Q61124 Mir3092-201ENSMUST00000174954 96 ntBASIC3.3□□□□□ -1.88
Cln3Q61124 Gm25633-201ENSMUST00000178565 107 ntBASIC3.3□□□□□ -1.88
Cln3Q61124 Mir7014-201ENSMUST00000183853 63 ntBASIC3.3□□□□□ -1.88
Cln3Q61124 Gm22805-201ENSMUST00000082739 107 ntBASIC3.3□□□□□ -1.88
Cln3Q61124 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Cln3Q61124 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cln3Q61124 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cln3Q61124 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Cln3Q61124 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.3□□□□□ -1.88
Cln3Q61124 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.3□□□□□ -1.88
Cln3Q61124 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.29□□□□□ -1.88
Cln3Q61124 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC3.29□□□□□ -1.88
Cln3Q61124 Gm22354-201ENSMUST00000083919 70 ntBASIC3.29□□□□□ -1.88
Cln3Q61124 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cln3Q61124 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cln3Q61124 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC3.28□□□□□ -1.88
Cln3Q61124 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Cln3Q61124 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Cln3Q61124 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Cln3Q61124 Gm22387-201ENSMUST00000158191 131 ntBASIC3.28□□□□□ -1.88
Cln3Q61124 Gm9156-201ENSMUST00000189660 463 ntBASIC3.28□□□□□ -1.88
Cln3Q61124 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.28□□□□□ -1.88
Cln3Q61124 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.28□□□□□ -1.88
Cln3Q61124 AF357341-201ENSMUST00000083088 75 ntBASIC3.28□□□□□ -1.88
Cln3Q61124 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Cln3Q61124 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Cln3Q61124 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.27□□□□□ -1.89
Cln3Q61124 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Cln3Q61124 Gm25371-201ENSMUST00000158162 101 ntBASIC3.27□□□□□ -1.89
Cln3Q61124 Mir3103-201ENSMUST00000175474 67 ntBASIC3.27□□□□□ -1.89
Cln3Q61124 Gm23090-201ENSMUST00000177331 78 ntBASIC3.27□□□□□ -1.89
Cln3Q61124 Mir6928-201ENSMUST00000185166 70 ntBASIC3.27□□□□□ -1.89
Cln3Q61124 Gm29658-201ENSMUST00000185404 230 ntBASIC3.27□□□□□ -1.89
Cln3Q61124 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.27□□□□□ -1.89
Cln3Q61124 Gm43521-201ENSMUST00000197838 255 ntBASIC3.27□□□□□ -1.89
Cln3Q61124 Gm43107-201ENSMUST00000198729 255 ntBASIC3.27□□□□□ -1.89
Cln3Q61124 AC158598.2-201ENSMUST00000213397 3832 ntBASIC3.27□□□□□ -1.89
Cln3Q61124 Mir34a-201ENSMUST00000083559 102 ntBASIC3.27□□□□□ -1.89
Cln3Q61124 Gm25627-201ENSMUST00000084003 153 ntBASIC3.27□□□□□ -1.89
Cln3Q61124 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Cln3Q61124 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
Cln3Q61124 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Cln3Q61124 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Cln3Q61124 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cln3Q61124 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cln3Q61124 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cln3Q61124 Gm22772-201ENSMUST00000104451 121 ntBASIC3.26□□□□□ -1.89
Cln3Q61124 Mir466l-201ENSMUST00000104866 121 ntBASIC3.26□□□□□ -1.89
Cln3Q61124 Gm14937-201ENSMUST00000119709 208 ntBASIC3.26□□□□□ -1.89
Cln3Q61124 n-R5s189-201ENSMUST00000122675 114 ntBASIC3.26□□□□□ -1.89
Cln3Q61124 Gm26150-201ENSMUST00000157426 151 ntBASIC3.26□□□□□ -1.89
Cln3Q61124 Gm26345-201ENSMUST00000157534 120 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms