Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.7□□□□□ -1.98
Rnf180Q3U827 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.7□□□□□ -1.98
Rnf180Q3U827 Gm24342-201ENSMUST00000103907 104 ntBASIC2.7□□□□□ -1.98
Rnf180Q3U827 Mir6352-201ENSMUST00000184495 116 ntBASIC2.7□□□□□ -1.98
Rnf180Q3U827 Gm28169-201ENSMUST00000190342 345 ntBASIC2.7□□□□□ -1.98
Rnf180Q3U827 Gm44385-201ENSMUST00000198781 81 ntBASIC2.7□□□□□ -1.98
Rnf180Q3U827 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.7□□□□□ -1.98
Rnf180Q3U827 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Rnf180Q3U827 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.69□□□□□ -1.98
Rnf180Q3U827 Gm24276-201ENSMUST00000102181 110 ntBASIC2.69□□□□□ -1.98
Rnf180Q3U827 Gm24049-201ENSMUST00000102409 100 ntBASIC2.69□□□□□ -1.98
Rnf180Q3U827 Gm27894-201ENSMUST00000184177 92 ntBASIC2.69□□□□□ -1.98
Rnf180Q3U827 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.69□□□□□ -1.98
Rnf180Q3U827 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.68□□□□□ -1.98
Rnf180Q3U827 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.68□□□□□ -1.98
Rnf180Q3U827 Gm26080-201ENSMUST00000104069 131 ntBASIC2.68□□□□□ -1.98
Rnf180Q3U827 Gm22586-201ENSMUST00000157507 122 ntBASIC2.68□□□□□ -1.98
Rnf180Q3U827 Gm24837-201ENSMUST00000158683 81 ntBASIC2.68□□□□□ -1.98
Rnf180Q3U827 Gm22476-201ENSMUST00000158902 100 ntBASIC2.68□□□□□ -1.98
Rnf180Q3U827 Mir3968-201ENSMUST00000175355 100 ntBASIC2.68□□□□□ -1.98
Rnf180Q3U827 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Rnf180Q3U827 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.68□□□□□ -1.98
Rnf180Q3U827 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.68□□□□□ -1.98
Rnf180Q3U827 Gm44555-201ENSMUST00000209008 148 ntBASIC2.68□□□□□ -1.98
Rnf180Q3U827 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.68□□□□□ -1.98
Rnf180Q3U827 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.68□□□□□ -1.98
Rnf180Q3U827 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.68□□□□□ -1.98
Rnf180Q3U827 Gm24280-201ENSMUST00000104237 134 ntBASIC2.67□□□□□ -1.98
Rnf180Q3U827 Snord89-201ENSMUST00000104516 110 ntBASIC2.67□□□□□ -1.98
Rnf180Q3U827 Gm13560-201ENSMUST00000121865 329 ntBASIC2.67□□□□□ -1.98
Rnf180Q3U827 Gm24288-201ENSMUST00000157630 144 ntBASIC2.67□□□□□ -1.98
Rnf180Q3U827 Gm20438-201ENSMUST00000174441 329 ntBASIC2.67□□□□□ -1.98
Rnf180Q3U827 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.67□□□□□ -1.98
Rnf180Q3U827 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.67□□□□□ -1.98
Rnf180Q3U827 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.67□□□□□ -1.98
Rnf180Q3U827 Gm23249-201ENSMUST00000083369 161 ntBASIC2.67□□□□□ -1.98
Rnf180Q3U827 Mir448-201ENSMUST00000083516 112 ntBASIC2.67□□□□□ -1.98
Rnf180Q3U827 Gm6025-201ENSMUST00000121517 201 ntBASIC2.66□□□□□ -1.98
Rnf180Q3U827 Gm24595-201ENSMUST00000122501 110 ntBASIC2.66□□□□□ -1.98
Rnf180Q3U827 Gm25976-201ENSMUST00000158695 130 ntBASIC2.66□□□□□ -1.98
Rnf180Q3U827 Gm28794-201ENSMUST00000185276 136 ntBASIC2.66□□□□□ -1.98
Rnf180Q3U827 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Rnf180Q3U827 Gm24929-201ENSMUST00000083403 139 ntBASIC2.66□□□□□ -1.98
Rnf180Q3U827 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.66□□□□□ -1.98
Rnf180Q3U827 Gm21940-201ENSMUST00000204940 2278 ntBASIC2.66□□□□□ -1.98
Rnf180Q3U827 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Rnf180Q3U827 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Rnf180Q3U827 Gm22606-201ENSMUST00000158290 103 ntBASIC2.65□□□□□ -1.99
Rnf180Q3U827 Gm25716-201ENSMUST00000158628 104 ntBASIC2.65□□□□□ -1.99
Rnf180Q3U827 Gm25491-201ENSMUST00000158733 308 ntBASIC2.65□□□□□ -1.99
Rnf180Q3U827 Gm27878-201ENSMUST00000184000 106 ntBASIC2.65□□□□□ -1.99
Rnf180Q3U827 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Rnf180Q3U827 Gm18546-201ENSMUST00000197245 676 ntBASIC2.65□□□□□ -1.99
Rnf180Q3U827 Gm44922-201ENSMUST00000206690 90 ntBASIC2.65□□□□□ -1.99
Rnf180Q3U827 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.65□□□□□ -1.99
Rnf180Q3U827 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Rnf180Q3U827 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Rnf180Q3U827 Gm23600-201ENSMUST00000157260 71 ntBASIC2.64□□□□□ -1.99
Rnf180Q3U827 Gm16162-201ENSMUST00000162296 297 ntBASIC2.64□□□□□ -1.99
Rnf180Q3U827 Gm26097-201ENSMUST00000179642 93 ntBASIC2.64□□□□□ -1.99
Rnf180Q3U827 Gm26864-201ENSMUST00000181346 156 ntBASIC2.64□□□□□ -1.99
Rnf180Q3U827 Mir6240-201ENSMUST00000184281 117 ntBASIC2.64□□□□□ -1.99
Rnf180Q3U827 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2.64□□□□□ -1.99
Rnf180Q3U827 AC154282.1-201ENSMUST00000223154 265 ntBASIC2.64□□□□□ -1.99
Rnf180Q3U827 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.64□□□□□ -1.99
Rnf180Q3U827 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
Rnf180Q3U827 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Rnf180Q3U827 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Rnf180Q3U827 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.63□□□□□ -1.99
Rnf180Q3U827 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Rnf180Q3U827 Gm23983-201ENSMUST00000157142 114 ntBASIC2.63□□□□□ -1.99
Rnf180Q3U827 Gm25425-201ENSMUST00000157611 96 ntBASIC2.63□□□□□ -1.99
Rnf180Q3U827 Gm25460-201ENSMUST00000157954 127 ntBASIC2.63□□□□□ -1.99
Rnf180Q3U827 Gm23665-201ENSMUST00000158054 62 ntBASIC2.63□□□□□ -1.99
Rnf180Q3U827 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.63□□□□□ -1.99
Rnf180Q3U827 Gm5900-201ENSMUST00000179862 375 ntBASIC2.63□□□□□ -1.99
Rnf180Q3U827 Gm18213-201ENSMUST00000207850 178 ntBASIC2.63□□□□□ -1.99
Rnf180Q3U827 Gm5010-201ENSMUST00000213131 260 ntBASIC2.63□□□□□ -1.99
Rnf180Q3U827 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Rnf180Q3U827 Gm24237-201ENSMUST00000157790 132 ntBASIC2.62□□□□□ -1.99
Rnf180Q3U827 Gm16561-201ENSMUST00000163001 192 ntBASIC2.62□□□□□ -1.99
Rnf180Q3U827 Gm25996-201ENSMUST00000175393 117 ntBASIC2.62□□□□□ -1.99
Rnf180Q3U827 Mir3961-201ENSMUST00000198795 59 ntBASIC2.62□□□□□ -1.99
Rnf180Q3U827 AC150901.1-201ENSMUST00000208407 145 ntBASIC2.62□□□□□ -1.99
Rnf180Q3U827 Gm23655-201ENSMUST00000122627 105 ntBASIC2.61□□□□□ -1.99
Rnf180Q3U827 Gm26150-201ENSMUST00000157426 151 ntBASIC2.61□□□□□ -1.99
Rnf180Q3U827 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.61□□□□□ -1.99
Rnf180Q3U827 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Rnf180Q3U827 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC2.6□□□□□ -1.99
Rnf180Q3U827 Gm22228-201ENSMUST00000157364 101 ntBASIC2.6□□□□□ -1.99
Rnf180Q3U827 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Rnf180Q3U827 Mir6353-201ENSMUST00000183596 113 ntBASIC2.6□□□□□ -1.99
Rnf180Q3U827 Mir6394-201ENSMUST00000184738 99 ntBASIC2.6□□□□□ -1.99
Rnf180Q3U827 Gm44491-201ENSMUST00000196794 96 ntBASIC2.6□□□□□ -1.99
Rnf180Q3U827 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.6□□□□□ -1.99
Rnf180Q3U827 Gm25513-201ENSMUST00000083861 162 ntBASIC2.6□□□□□ -1.99
Rnf180Q3U827 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Rnf180Q3U827 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Rnf180Q3U827 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Rnf180Q3U827 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 187.9 ms