Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm25089-201ENSMUST00000102015 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm24126-201ENSMUST00000104111 106 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm14536-201ENSMUST00000118324 138 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm13588-201ENSMUST00000120026 135 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm15027-201ENSMUST00000120922 138 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm22850-201ENSMUST00000157714 82 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm22517-201ENSMUST00000158265 136 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm23005-201ENSMUST00000158950 136 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Mir28b-201ENSMUST00000175399 80 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm25840-201ENSMUST00000177821 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm24952-201ENSMUST00000177909 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm23682-201ENSMUST00000178146 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm24652-201ENSMUST00000178223 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm22629-201ENSMUST00000178272 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm24021-201ENSMUST00000178435 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm22274-201ENSMUST00000178441 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm22050-201ENSMUST00000178442 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm23688-201ENSMUST00000178502 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm23944-201ENSMUST00000178607 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm26283-201ENSMUST00000178625 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm25452-201ENSMUST00000178776 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm23286-201ENSMUST00000178963 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm22640-201ENSMUST00000179035 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm25984-201ENSMUST00000179129 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm25585-201ENSMUST00000179469 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm26374-201ENSMUST00000179737 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm24040-201ENSMUST00000179786 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm25017-201ENSMUST00000179805 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm23618-201ENSMUST00000179912 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm26284-201ENSMUST00000180107 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm24570-201ENSMUST00000180314 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm24654-201ENSMUST00000180315 79 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Mir6406-201ENSMUST00000183592 120 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm43587-201ENSMUST00000199590 204 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm23377-201ENSMUST00000082943 126 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col28a1Q2UY11 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.1□□□□□ -2.07
Col28a1Q2UY11 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Col28a1Q2UY11 Gm22093-201ENSMUST00000158980 111 ntBASIC2.09□□□□□ -2.07
Col28a1Q2UY11 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col28a1Q2UY11 Gm29613-201ENSMUST00000185846 313 ntBASIC2.09□□□□□ -2.07
Col28a1Q2UY11 Gm29544-201ENSMUST00000188860 313 ntBASIC2.09□□□□□ -2.07
Col28a1Q2UY11 Gm28169-201ENSMUST00000190342 345 ntBASIC2.09□□□□□ -2.07
Col28a1Q2UY11 Gm28808-201ENSMUST00000190978 313 ntBASIC2.09□□□□□ -2.07
Col28a1Q2UY11 Gm44459-201ENSMUST00000203926 160 ntBASIC2.09□□□□□ -2.07
Col28a1Q2UY11 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.09□□□□□ -2.07
Col28a1Q2UY11 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Col28a1Q2UY11 Gm23950-201ENSMUST00000104026 129 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm22270-201ENSMUST00000104034 132 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm25377-201ENSMUST00000104334 129 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm14588-201ENSMUST00000119895 172 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm24277-201ENSMUST00000158661 104 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm26360-201ENSMUST00000158872 103 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm24926-201ENSMUST00000178053 79 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm22632-201ENSMUST00000178266 79 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm38298-201ENSMUST00000193578 118 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm18546-201ENSMUST00000197245 676 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm43901-201ENSMUST00000203247 453 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.08□□□□□ -2.08
Col28a1Q2UY11 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm24461-201ENSMUST00000082735 103 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm23040-201ENSMUST00000083869 163 ntBASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col28a1Q2UY11 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Gm24234-201ENSMUST00000104316 107 ntBASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Gm22105-201ENSMUST00000116734 116 ntBASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Gm22678-201ENSMUST00000116974 101 ntBASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Gm24595-201ENSMUST00000122501 110 ntBASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Gm24896-201ENSMUST00000122741 135 ntBASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Gm23718-201ENSMUST00000157350 307 ntBASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Gm23080-201ENSMUST00000157846 103 ntBASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Gm22803-201ENSMUST00000158049 283 ntBASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Gm20613-201ENSMUST00000175828 345 ntBASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Gm37116-201ENSMUST00000195161 147 ntBASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Mir7217-201ENSMUST00000200304 62 ntBASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
Col28a1Q2UY11 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.06□□□□□ -2.08
Col28a1Q2UY11 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.06□□□□□ -2.08
Col28a1Q2UY11 Gm24232-201ENSMUST00000104314 132 ntBASIC2.06□□□□□ -2.08
Col28a1Q2UY11 Gm23772-201ENSMUST00000104433 102 ntBASIC2.06□□□□□ -2.08
Col28a1Q2UY11 Gm12941-201ENSMUST00000117934 220 ntBASIC2.06□□□□□ -2.08
Col28a1Q2UY11 Gm16355-201ENSMUST00000128606 231 ntBASIC2.06□□□□□ -2.08
Col28a1Q2UY11 Gm24916-201ENSMUST00000157287 79 ntBASIC2.06□□□□□ -2.08
Col28a1Q2UY11 Mir7026-201ENSMUST00000184384 67 ntBASIC2.06□□□□□ -2.08
Col28a1Q2UY11 Gm43602-201ENSMUST00000196772 300 ntBASIC2.06□□□□□ -2.08
Col28a1Q2UY11 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.06□□□□□ -2.08
Col28a1Q2UY11 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms