Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.6□□□□□ -1.83
Col9a1Q05722 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col9a1Q05722 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col9a1Q05722 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col9a1Q05722 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col9a1Q05722 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.59□□□□□ -1.83
Col9a1Q05722 Gm23951-201ENSMUST00000104029 132 ntBASIC3.59□□□□□ -1.83
Col9a1Q05722 Gm15180-201ENSMUST00000117745 492 ntBASIC3.59□□□□□ -1.83
Col9a1Q05722 Gm11356-201ENSMUST00000118974 192 ntBASIC3.59□□□□□ -1.83
Col9a1Q05722 Gm22999-201ENSMUST00000157082 88 ntBASIC3.59□□□□□ -1.83
Col9a1Q05722 Gm24014-201ENSMUST00000157728 157 ntBASIC3.59□□□□□ -1.83
Col9a1Q05722 Gm27505-201ENSMUST00000185071 110 ntBASIC3.59□□□□□ -1.83
Col9a1Q05722 Snord118-201ENSMUST00000082965 135 ntBASIC3.59□□□□□ -1.83
Col9a1Q05722 Mir215-201ENSMUST00000083628 112 ntBASIC3.59□□□□□ -1.83
Col9a1Q05722 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.59□□□□□ -1.84
Col9a1Q05722 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Col9a1Q05722 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Col9a1Q05722 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.59□□□□□ -1.84
Col9a1Q05722 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Col9a1Q05722 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Col9a1Q05722 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col9a1Q05722 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Col9a1Q05722 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Col9a1Q05722 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col9a1Q05722 Gm26477-201ENSMUST00000122617 323 ntBASIC3.58□□□□□ -1.84
Col9a1Q05722 Gm14389-201ENSMUST00000140453 241 ntBASIC3.58□□□□□ -1.84
Col9a1Q05722 Gm45288-201ENSMUST00000210236 151 ntBASIC3.58□□□□□ -1.84
Col9a1Q05722 Gm20108-201ENSMUST00000219977 153 ntBASIC3.58□□□□□ -1.84
Col9a1Q05722 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC3.58□□□□□ -1.84
Col9a1Q05722 Gm25581-201ENSMUST00000083410 164 ntBASIC3.58□□□□□ -1.84
Col9a1Q05722 Snora33-201ENSMUST00000093556 129 ntBASIC3.58□□□□□ -1.84
Col9a1Q05722 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.58□□□□□ -1.84
Col9a1Q05722 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col9a1Q05722 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col9a1Q05722 Gm43753-201ENSMUST00000196539 3309 ntBASIC3.57□□□□□ -1.84
Col9a1Q05722 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.57□□□□□ -1.84
Col9a1Q05722 Gm25061-201ENSMUST00000104665 107 ntBASIC3.57□□□□□ -1.84
Col9a1Q05722 n-R5s39-201ENSMUST00000122613 108 ntBASIC3.57□□□□□ -1.84
Col9a1Q05722 Gm23351-201ENSMUST00000158427 125 ntBASIC3.57□□□□□ -1.84
Col9a1Q05722 Trav5d-3-201ENSMUST00000170041 270 ntBASIC3.57□□□□□ -1.84
Col9a1Q05722 Gm20399-201ENSMUST00000174652 132 ntBASIC3.57□□□□□ -1.84
Col9a1Q05722 Mir6376-201ENSMUST00000185149 131 ntBASIC3.57□□□□□ -1.84
Col9a1Q05722 AC158598.1-201ENSMUST00000214349 3847 ntBASIC3.57□□□□□ -1.84
Col9a1Q05722 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.57□□□□□ -1.84
Col9a1Q05722 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Col9a1Q05722 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC3.56□□□□□ -1.84
Col9a1Q05722 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.56□□□□□ -1.84
Col9a1Q05722 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col9a1Q05722 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col9a1Q05722 Gm22782-201ENSMUST00000104082 132 ntBASIC3.56□□□□□ -1.84
Col9a1Q05722 Gm23468-201ENSMUST00000157125 108 ntBASIC3.56□□□□□ -1.84
Col9a1Q05722 Gm26100-201ENSMUST00000157245 127 ntBASIC3.56□□□□□ -1.84
Col9a1Q05722 Gm24674-201ENSMUST00000179194 104 ntBASIC3.56□□□□□ -1.84
Col9a1Q05722 Gm28647-201ENSMUST00000188416 197 ntBASIC3.56□□□□□ -1.84
Col9a1Q05722 Snord80-201ENSMUST00000083801 81 ntBASIC3.56□□□□□ -1.84
Col9a1Q05722 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col9a1Q05722 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col9a1Q05722 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.55□□□□□ -1.84
Col9a1Q05722 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col9a1Q05722 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col9a1Q05722 Gm14816-201ENSMUST00000117174 294 ntBASIC3.55□□□□□ -1.84
Col9a1Q05722 Gm13433-201ENSMUST00000121701 240 ntBASIC3.55□□□□□ -1.84
Col9a1Q05722 Gm26476-201ENSMUST00000122618 313 ntBASIC3.55□□□□□ -1.84
Col9a1Q05722 Gm24244-201ENSMUST00000157317 130 ntBASIC3.55□□□□□ -1.84
Col9a1Q05722 Gm24436-201ENSMUST00000157889 302 ntBASIC3.55□□□□□ -1.84
Col9a1Q05722 Gm22853-201ENSMUST00000174974 131 ntBASIC3.55□□□□□ -1.84
Col9a1Q05722 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC3.55□□□□□ -1.84
Col9a1Q05722 Gm24626-201ENSMUST00000082621 161 ntBASIC3.55□□□□□ -1.84
Col9a1Q05722 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col9a1Q05722 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col9a1Q05722 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.54□□□□□ -1.84
Col9a1Q05722 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Col9a1Q05722 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.54□□□□□ -1.84
Col9a1Q05722 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col9a1Q05722 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC3.54□□□□□ -1.84
Col9a1Q05722 Gm24787-201ENSMUST00000157380 123 ntBASIC3.54□□□□□ -1.84
Col9a1Q05722 Gm22859-201ENSMUST00000174978 122 ntBASIC3.54□□□□□ -1.84
Col9a1Q05722 Gm5224-201ENSMUST00000183060 350 ntBASIC3.54□□□□□ -1.84
Col9a1Q05722 Trbv25-201ENSMUST00000194700 273 ntBASIC3.54□□□□□ -1.84
Col9a1Q05722 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.54□□□□□ -1.84
Col9a1Q05722 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Col9a1Q05722 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.54□□□□□ -1.84
Col9a1Q05722 Gm24038-201ENSMUST00000082872 159 ntBASIC3.54□□□□□ -1.84
Col9a1Q05722 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col9a1Q05722 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col9a1Q05722 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.53□□□□□ -1.84
Col9a1Q05722 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Col9a1Q05722 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col9a1Q05722 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
Col9a1Q05722 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col9a1Q05722 Gm22939-201ENSMUST00000103958 131 ntBASIC3.53□□□□□ -1.84
Col9a1Q05722 Gm11253-201ENSMUST00000118486 201 ntBASIC3.53□□□□□ -1.84
Col9a1Q05722 Gm12858-201ENSMUST00000121913 208 ntBASIC3.53□□□□□ -1.84
Col9a1Q05722 Gm25371-201ENSMUST00000158162 101 ntBASIC3.53□□□□□ -1.84
Col9a1Q05722 Gm24637-201ENSMUST00000158674 85 ntBASIC3.53□□□□□ -1.84
Col9a1Q05722 Gm25642-201ENSMUST00000175137 66 ntBASIC3.53□□□□□ -1.84
Col9a1Q05722 Gm23917-201ENSMUST00000175256 98 ntBASIC3.53□□□□□ -1.84
Col9a1Q05722 Gm25354-201ENSMUST00000179110 105 ntBASIC3.53□□□□□ -1.84
Col9a1Q05722 Gm27987-201ENSMUST00000184023 93 ntBASIC3.53□□□□□ -1.84
Col9a1Q05722 Mir21c-201ENSMUST00000184910 78 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms