Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm22972-201ENSMUST00000083297 131 ntBASIC2.47□□□□□ -2.01
Col8a1Q00780 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Col8a1Q00780 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm26421-201ENSMUST00000104279 132 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm25728-201ENSMUST00000104525 159 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm22678-201ENSMUST00000116974 101 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm22679-201ENSMUST00000116975 100 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm23886-201ENSMUST00000122684 313 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm16265-201ENSMUST00000134558 108 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm22983-201ENSMUST00000158308 104 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm20613-201ENSMUST00000175828 345 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm23567-201ENSMUST00000178005 107 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm28900-201ENSMUST00000185232 156 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.46□□□□□ -2.02
Col8a1Q00780 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm26494-201ENSMUST00000083154 143 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm24493-201ENSMUST00000083805 143 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm24698-201ENSMUST00000083883 130 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm25681-201ENSMUST00000083938 106 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.46□□□□□ -2.02
Col8a1Q00780 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Col8a1Q00780 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Col8a1Q00780 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.45□□□□□ -2.02
Col8a1Q00780 Gm14448-201ENSMUST00000116383 210 ntBASIC2.45□□□□□ -2.02
Col8a1Q00780 Mir466k-201ENSMUST00000116774 122 ntBASIC2.45□□□□□ -2.02
Col8a1Q00780 Gm22031-201ENSMUST00000116945 126 ntBASIC2.45□□□□□ -2.02
Col8a1Q00780 Gm16533-201ENSMUST00000140035 228 ntBASIC2.45□□□□□ -2.02
Col8a1Q00780 Gm23253-201ENSMUST00000157441 104 ntBASIC2.45□□□□□ -2.02
Col8a1Q00780 Gm24879-201ENSMUST00000158386 143 ntBASIC2.45□□□□□ -2.02
Col8a1Q00780 Gm24837-201ENSMUST00000158683 81 ntBASIC2.45□□□□□ -2.02
Col8a1Q00780 Gm44921-201ENSMUST00000205290 301 ntBASIC2.45□□□□□ -2.02
Col8a1Q00780 Gm19563-201ENSMUST00000222031 270 ntBASIC2.45□□□□□ -2.02
Col8a1Q00780 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.45□□□□□ -2.02
Col8a1Q00780 Mir340-201ENSMUST00000083483 98 ntBASIC2.45□□□□□ -2.02
Col8a1Q00780 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Col8a1Q00780 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Col8a1Q00780 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Col8a1Q00780 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Col8a1Q00780 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Col8a1Q00780 Gm25500-201ENSMUST00000104426 123 ntBASIC2.44□□□□□ -2.02
Col8a1Q00780 Mir669d-201ENSMUST00000104644 121 ntBASIC2.44□□□□□ -2.02
Col8a1Q00780 Gm12213-201ENSMUST00000119924 353 ntBASIC2.44□□□□□ -2.02
Col8a1Q00780 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Col8a1Q00780 Gm23043-201ENSMUST00000157890 109 ntBASIC2.44□□□□□ -2.02
Col8a1Q00780 Gm23859-201ENSMUST00000158383 64 ntBASIC2.44□□□□□ -2.02
Col8a1Q00780 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.44□□□□□ -2.02
Col8a1Q00780 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.44□□□□□ -2.02
Col8a1Q00780 Gm44057-201ENSMUST00000204547 96 ntBASIC2.44□□□□□ -2.02
Col8a1Q00780 Gm25588-201ENSMUST00000082501 140 ntBASIC2.44□□□□□ -2.02
Col8a1Q00780 Gm23247-201ENSMUST00000083373 107 ntBASIC2.44□□□□□ -2.02
Col8a1Q00780 Gm22827-201ENSMUST00000083766 107 ntBASIC2.44□□□□□ -2.02
Col8a1Q00780 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Col8a1Q00780 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Col8a1Q00780 Gm25466-201ENSMUST00000103995 132 ntBASIC2.43□□□□□ -2.02
Col8a1Q00780 Gm25091-201ENSMUST00000103997 71 ntBASIC2.43□□□□□ -2.02
Col8a1Q00780 Gm13588-201ENSMUST00000120026 135 ntBASIC2.43□□□□□ -2.02
Col8a1Q00780 Mir3083-201ENSMUST00000175377 64 ntBASIC2.43□□□□□ -2.02
Col8a1Q00780 Mir6350-201ENSMUST00000183639 105 ntBASIC2.43□□□□□ -2.02
Col8a1Q00780 Mir8116-201ENSMUST00000184134 97 ntBASIC2.43□□□□□ -2.02
Col8a1Q00780 Mir8096-201ENSMUST00000184526 127 ntBASIC2.43□□□□□ -2.02
Col8a1Q00780 Gm44459-201ENSMUST00000203926 160 ntBASIC2.43□□□□□ -2.02
Col8a1Q00780 Mir489-201ENSMUST00000093599 107 ntBASIC2.43□□□□□ -2.02
Col8a1Q00780 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col8a1Q00780 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC2.43□□□□□ -2.02
Col8a1Q00780 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.43□□□□□ -2.02
Col8a1Q00780 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col8a1Q00780 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col8a1Q00780 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Col8a1Q00780 Gm23654-201ENSMUST00000116758 126 ntBASIC2.42□□□□□ -2.02
Col8a1Q00780 Gm22196-201ENSMUST00000116865 109 ntBASIC2.42□□□□□ -2.02
Col8a1Q00780 Gm25825-201ENSMUST00000157091 124 ntBASIC2.42□□□□□ -2.02
Col8a1Q00780 Gm24443-201ENSMUST00000157242 132 ntBASIC2.42□□□□□ -2.02
Col8a1Q00780 Mir3075-201ENSMUST00000175340 85 ntBASIC2.42□□□□□ -2.02
Col8a1Q00780 Gm25933-201ENSMUST00000178943 108 ntBASIC2.42□□□□□ -2.02
Col8a1Q00780 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col8a1Q00780 Mir6405-201ENSMUST00000184584 124 ntBASIC2.42□□□□□ -2.02
Col8a1Q00780 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Col8a1Q00780 Gm23040-201ENSMUST00000083869 163 ntBASIC2.42□□□□□ -2.02
Col8a1Q00780 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col8a1Q00780 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Col8a1Q00780 Gm22270-201ENSMUST00000104034 132 ntBASIC2.41□□□□□ -2.02
Col8a1Q00780 Gm14946-201ENSMUST00000119859 296 ntBASIC2.41□□□□□ -2.02
Col8a1Q00780 Gm25289-201ENSMUST00000122799 119 ntBASIC2.41□□□□□ -2.02
Col8a1Q00780 Gm24813-201ENSMUST00000175310 84 ntBASIC2.41□□□□□ -2.02
Col8a1Q00780 Gm26466-201ENSMUST00000179615 79 ntBASIC2.41□□□□□ -2.02
Col8a1Q00780 Gm29535-201ENSMUST00000185723 109 ntBASIC2.41□□□□□ -2.02
Col8a1Q00780 Gm28143-201ENSMUST00000191082 109 ntBASIC2.41□□□□□ -2.02
Col8a1Q00780 Gm45429-201ENSMUST00000209527 172 ntBASIC2.41□□□□□ -2.02
Col8a1Q00780 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.41□□□□□ -2.02
Col8a1Q00780 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.41□□□□□ -2.02
Col8a1Q00780 Mir184-201ENSMUST00000083662 69 ntBASIC2.41□□□□□ -2.02
Col8a1Q00780 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col8a1Q00780 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Col8a1Q00780 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.41□□□□□ -2.02
Col8a1Q00780 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col8a1Q00780 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
Col8a1Q00780 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
Col8a1Q00780 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.02
Col8a1Q00780 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.4□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 118.2 ms