Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm36946-201ENSMUST00000192706 435 ntBASIC0.63□□□□□ -2.31
Nkx3-1P97436 Gm44473-201ENSMUST00000204039 152 ntBASIC0.63□□□□□ -2.31
Nkx3-1P97436 Gm45543-201ENSMUST00000209327 88 ntBASIC0.63□□□□□ -2.31
Nkx3-1P97436 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.63□□□□□ -2.31
Nkx3-1P97436 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.63□□□□□ -2.31
Nkx3-1P97436 Snord35a-201ENSMUST00000083884 90 ntBASIC0.63□□□□□ -2.31
Nkx3-1P97436 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.62□□□□□ -2.31
Nkx3-1P97436 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Nkx3-1P97436 Gm23321-201ENSMUST00000104465 126 ntBASIC0.62□□□□□ -2.31
Nkx3-1P97436 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Nkx3-1P97436 Gm24440-201ENSMUST00000157236 63 ntBASIC0.62□□□□□ -2.31
Nkx3-1P97436 Gm22883-201ENSMUST00000157376 106 ntBASIC0.62□□□□□ -2.31
Nkx3-1P97436 Gm23262-201ENSMUST00000158323 168 ntBASIC0.62□□□□□ -2.31
Nkx3-1P97436 Gm20386-201ENSMUST00000174010 132 ntBASIC0.62□□□□□ -2.31
Nkx3-1P97436 Gm24512-201ENSMUST00000174963 65 ntBASIC0.62□□□□□ -2.31
Nkx3-1P97436 Gm25750-201ENSMUST00000175483 112 ntBASIC0.62□□□□□ -2.31
Nkx3-1P97436 Gm44358-201ENSMUST00000196301 98 ntBASIC0.62□□□□□ -2.31
Nkx3-1P97436 Gm44396-201ENSMUST00000199843 114 ntBASIC0.62□□□□□ -2.31
Nkx3-1P97436 Gm26224-201ENSMUST00000082506 80 ntBASIC0.62□□□□□ -2.31
Nkx3-1P97436 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.62□□□□□ -2.31
Nkx3-1P97436 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Nkx3-1P97436 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Nkx3-1P97436 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Nkx3-1P97436 Gm23779-201ENSMUST00000157938 64 ntBASIC0.61□□□□□ -2.31
Nkx3-1P97436 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.61□□□□□ -2.31
Nkx3-1P97436 Gm25450-201ENSMUST00000179144 107 ntBASIC0.61□□□□□ -2.31
Nkx3-1P97436 Gm28288-201ENSMUST00000191019 214 ntBASIC0.61□□□□□ -2.31
Nkx3-1P97436 Gm38113-201ENSMUST00000193704 201 ntBASIC0.61□□□□□ -2.31
Nkx3-1P97436 Gm34783-201ENSMUST00000209159 303 ntBASIC0.61□□□□□ -2.31
Nkx3-1P97436 Gm25851-201ENSMUST00000082794 107 ntBASIC0.61□□□□□ -2.31
Nkx3-1P97436 Gm25697-201ENSMUST00000082902 98 ntBASIC0.61□□□□□ -2.31
Nkx3-1P97436 Mir490-201ENSMUST00000093567 84 ntBASIC0.61□□□□□ -2.31
Nkx3-1P97436 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
Nkx3-1P97436 Gm14536-201ENSMUST00000118324 138 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 Gm15027-201ENSMUST00000120922 138 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 Gm25544-201ENSMUST00000122676 120 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 Gm22598-201ENSMUST00000157600 127 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 Gm20391-201ENSMUST00000174722 106 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 Gm24818-201ENSMUST00000175093 161 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 Gm29022-201ENSMUST00000190702 225 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 Gm34015-201ENSMUST00000194908 451 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 Mir219b-201ENSMUST00000198317 65 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.6□□□□□ -2.31
Nkx3-1P97436 Gm30155-201ENSMUST00000223458 339 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 Gm22294-201ENSMUST00000083308 104 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 Gm22365-201ENSMUST00000093750 117 ntBASIC0.6□□□□□ -2.31
Nkx3-1P97436 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm26135-201ENSMUST00000101993 72 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm23126-201ENSMUST00000104260 134 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm25787-201ENSMUST00000104709 92 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm14307-201ENSMUST00000118930 291 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm14297-201ENSMUST00000129110 291 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm16362-201ENSMUST00000135189 214 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm14298-201ENSMUST00000139032 237 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm16356-201ENSMUST00000143300 169 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm22233-201ENSMUST00000157464 114 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm25868-201ENSMUST00000158253 114 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm22085-201ENSMUST00000158344 110 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm23921-201ENSMUST00000175258 107 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm22802-201ENSMUST00000175621 89 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Snord50b-201ENSMUST00000178497 72 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm28661-201ENSMUST00000188231 681 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm44419-201ENSMUST00000203338 229 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm44052-201ENSMUST00000203382 396 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm43884-201ENSMUST00000204251 559 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Nkx3-1P97436 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Nkx3-1P97436 Gm24116-201ENSMUST00000103975 107 ntBASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm12647-201ENSMUST00000118977 265 ntBASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm14922-201ENSMUST00000121131 163 ntBASIC0.58□□□□□ -2.32
Nkx3-1P97436 Mir1951-201ENSMUST00000157981 89 ntBASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm23898-201ENSMUST00000158111 103 ntBASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm24737-201ENSMUST00000158861 100 ntBASIC0.58□□□□□ -2.32
Nkx3-1P97436 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.58□□□□□ -2.32
Nkx3-1P97436 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.58□□□□□ -2.32
Nkx3-1P97436 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm24043-201ENSMUST00000083108 116 ntBASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm22884-201ENSMUST00000083127 140 ntBASIC0.58□□□□□ -2.32
Nkx3-1P97436 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm23039-201ENSMUST00000083870 161 ntBASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm25937-201ENSMUST00000083912 107 ntBASIC0.58□□□□□ -2.32
Nkx3-1P97436 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
Nkx3-1P97436 Gm15379-201ENSMUST00000121224 648 ntBASIC0.57□□□□□ -2.32
Nkx3-1P97436 Gm24595-201ENSMUST00000122501 110 ntBASIC0.57□□□□□ -2.32
Nkx3-1P97436 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Nkx3-1P97436 Gm24221-201ENSMUST00000158833 313 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms