Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm15289-201ENSMUST00000117793 244 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Gm23169-201ENSMUST00000157157 112 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Gm23024-201ENSMUST00000158770 292 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
Col1a1P11087 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Gm28956-201ENSMUST00000189047 427 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Gm36953-201ENSMUST00000195295 268 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
Col1a1P11087 Gm24966-201ENSMUST00000082443 79 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Gm24356-201ENSMUST00000082859 106 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Gm22743-201ENSMUST00000083445 133 ntBASIC-0.18□□□□□ -2.44
Col1a1P11087 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.19□□□□□ -2.44
Col1a1P11087 Gm24141-201ENSMUST00000122776 115 ntBASIC-0.19□□□□□ -2.44
Col1a1P11087 Gm22143-201ENSMUST00000157401 203 ntBASIC-0.19□□□□□ -2.44
Col1a1P11087 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-0.19□□□□□ -2.44
Col1a1P11087 Gm28256-201ENSMUST00000188953 139 ntBASIC-0.19□□□□□ -2.44
Col1a1P11087 Gm28559-201ENSMUST00000190532 139 ntBASIC-0.19□□□□□ -2.44
Col1a1P11087 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
Col1a1P11087 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.19□□□□□ -2.44
Col1a1P11087 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.19□□□□□ -2.44
Col1a1P11087 AC173345.2-201ENSMUST00000222795 153 ntBASIC-0.19□□□□□ -2.44
Col1a1P11087 AC183092.1-201ENSMUST00000224301 153 ntBASIC-0.19□□□□□ -2.44
Col1a1P11087 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.19□□□□□ -2.44
Col1a1P11087 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.19□□□□□ -2.44
Col1a1P11087 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.2□□□□□ -2.44
Col1a1P11087 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.2□□□□□ -2.44
Col1a1P11087 Gm14782-201ENSMUST00000120151 195 ntBASIC-0.2□□□□□ -2.44
Col1a1P11087 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.2□□□□□ -2.44
Col1a1P11087 Gm23763-201ENSMUST00000158345 60 ntBASIC-0.2□□□□□ -2.44
Col1a1P11087 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.2□□□□□ -2.44
Col1a1P11087 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.2□□□□□ -2.44
Col1a1P11087 Gm29352-201ENSMUST00000188054 544 ntBASIC-0.2□□□□□ -2.44
Col1a1P11087 Gm28848-201ENSMUST00000189984 168 ntBASIC-0.2□□□□□ -2.44
Col1a1P11087 Mir327-201ENSMUST00000199328 69 ntBASIC-0.2□□□□□ -2.44
Col1a1P11087 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.2□□□□□ -2.44
Col1a1P11087 AC138667.2-201ENSMUST00000224880 598 ntBASIC-0.2□□□□□ -2.44
Col1a1P11087 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.2□□□□□ -2.44
Col1a1P11087 Gm23898-201ENSMUST00000158111 103 ntBASIC-0.21□□□□□ -2.44
Col1a1P11087 Gm22200-201ENSMUST00000158614 67 ntBASIC-0.21□□□□□ -2.44
Col1a1P11087 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC-0.21□□□□□ -2.44
Col1a1P11087 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.21□□□□□ -2.44
Col1a1P11087 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC-0.21□□□□□ -2.44
Col1a1P11087 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.21□□□□□ -2.44
Col1a1P11087 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.21□□□□□ -2.44
Col1a1P11087 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.21□□□□□ -2.44
Col1a1P11087 Gm29640-201ENSMUST00000187972 278 ntBASIC-0.21□□□□□ -2.44
Col1a1P11087 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
Col1a1P11087 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.21□□□□□ -2.44
Col1a1P11087 AC116589.9-201ENSMUST00000221462 908 ntBASIC-0.21□□□□□ -2.44
Col1a1P11087 Mir465-201ENSMUST00000093563 74 ntBASIC-0.21□□□□□ -2.44
Col1a1P11087 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm11512-201ENSMUST00000119669 663 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm23034-201ENSMUST00000158001 147 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm10177-202ENSMUST00000161698 207 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm23725-201ENSMUST00000177876 107 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm27490-201ENSMUST00000184754 128 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm27624-201ENSMUST00000185047 177 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Mir691-201ENSMUST00000199719 78 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm22229-201ENSMUST00000082987 108 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm23731-201ENSMUST00000083749 107 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm26314-201ENSMUST00000083891 107 ntBASIC-0.22□□□□□ -2.44
Col1a1P11087 Gm12143-201ENSMUST00000119666 332 ntBASIC-0.22□□□□□ -2.45
Col1a1P11087 Gm14989-201ENSMUST00000120497 207 ntBASIC-0.22□□□□□ -2.45
Col1a1P11087 Gm24910-201ENSMUST00000157289 272 ntBASIC-0.22□□□□□ -2.45
Col1a1P11087 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.22□□□□□ -2.45
Col1a1P11087 Gm27817-201ENSMUST00000184302 233 ntBASIC-0.22□□□□□ -2.45
Col1a1P11087 Mir195b-201ENSMUST00000184814 97 ntBASIC-0.22□□□□□ -2.45
Col1a1P11087 Gm45119-201ENSMUST00000207612 199 ntBASIC-0.22□□□□□ -2.45
Col1a1P11087 AC102291.2-201ENSMUST00000228083 367 ntBASIC-0.22□□□□□ -2.45
Col1a1P11087 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.22□□□□□ -2.45
Col1a1P11087 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.22□□□□□ -2.45
Col1a1P11087 Mir183-201ENSMUST00000083685 70 ntBASIC-0.22□□□□□ -2.45
Col1a1P11087 Mir743b-201ENSMUST00000104751 77 ntBASIC-0.23□□□□□ -2.45
Col1a1P11087 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC-0.23□□□□□ -2.45
Col1a1P11087 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.23□□□□□ -2.45
Col1a1P11087 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.23□□□□□ -2.45
Col1a1P11087 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.23□□□□□ -2.45
Col1a1P11087 Gm26271-201ENSMUST00000158349 104 ntBASIC-0.23□□□□□ -2.45
Col1a1P11087 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.23□□□□□ -2.45
Col1a1P11087 Gm28992-201ENSMUST00000190534 139 ntBASIC-0.23□□□□□ -2.45
Col1a1P11087 Gm37641-201ENSMUST00000193837 239 ntBASIC-0.23□□□□□ -2.45
Col1a1P11087 Gm45315-201ENSMUST00000209283 333 ntBASIC-0.23□□□□□ -2.45
Col1a1P11087 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.23□□□□□ -2.45
Col1a1P11087 AC116589.7-201ENSMUST00000221061 239 ntBASIC-0.23□□□□□ -2.45
Col1a1P11087 AC164117.1-201ENSMUST00000221726 239 ntBASIC-0.23□□□□□ -2.45
Col1a1P11087 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.24□□□□□ -2.45
Col1a1P11087 Gm14126-201ENSMUST00000122345 395 ntBASIC-0.24□□□□□ -2.45
Col1a1P11087 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.24□□□□□ -2.45
Col1a1P11087 Mir1933-201ENSMUST00000158930 88 ntBASIC-0.24□□□□□ -2.45
Col1a1P11087 Gm24418-201ENSMUST00000177597 79 ntBASIC-0.24□□□□□ -2.45
Col1a1P11087 Gm23619-201ENSMUST00000178411 94 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms