Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm27715-201ENSMUST00000184714 260 ntBASIC-1.08□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm44469-201ENSMUST00000198558 79 ntBASIC-1.08□□□□□ -2.58
Trav4-3A0A0B4J1K1 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC-1.08□□□□□ -2.58
Trav4-3A0A0B4J1K1 AC116589.9-201ENSMUST00000221462 908 ntBASIC-1.08□□□□□ -2.58
Trav4-3A0A0B4J1K1 Mir451a-201ENSMUST00000093557 72 ntBASIC-1.08□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm23422-201ENSMUST00000102000 107 ntBASIC-1.09□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm24000-201ENSMUST00000158063 89 ntBASIC-1.09□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm24728-201ENSMUST00000158226 125 ntBASIC-1.09□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm28196-201ENSMUST00000187719 640 ntBASIC-1.09□□□□□ -2.58
Trav4-3A0A0B4J1K1 AC141438.3-201ENSMUST00000215632 202 ntBASIC-1.09□□□□□ -2.58
Trav4-3A0A0B4J1K1 AC168880.1-201ENSMUST00000225113 707 ntBASIC-1.09□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm24455-201ENSMUST00000083348 131 ntBASIC-1.09□□□□□ -2.58
Trav4-3A0A0B4J1K1 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-1.09□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm25825-201ENSMUST00000157091 124 ntBASIC-1.1□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm25981-201ENSMUST00000157921 295 ntBASIC-1.1□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
Trav4-3A0A0B4J1K1 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC-1.1□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm25249-201ENSMUST00000175471 78 ntBASIC-1.1□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm22118-201ENSMUST00000175593 171 ntBASIC-1.1□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm23002-201ENSMUST00000179221 107 ntBASIC-1.1□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm37337-201ENSMUST00000192601 993 ntBASIC-1.1□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm44338-201ENSMUST00000198614 110 ntBASIC-1.1□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC-1.1□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm26457-201ENSMUST00000082678 78 ntBASIC-1.1□□□□□ -2.59
Trav4-3A0A0B4J1K1 Mir669i-201ENSMUST00000117007 127 ntBASIC-1.11□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm12779-201ENSMUST00000121496 143 ntBASIC-1.11□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm14298-201ENSMUST00000139032 237 ntBASIC-1.11□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm23000-201ENSMUST00000157083 139 ntBASIC-1.11□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm25444-201ENSMUST00000158999 113 ntBASIC-1.11□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm27817-201ENSMUST00000184302 233 ntBASIC-1.11□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm38109-201ENSMUST00000195386 181 ntBASIC-1.11□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm42845-201ENSMUST00000197766 105 ntBASIC-1.11□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm5023-201ENSMUST00000217442 587 ntBASIC-1.11□□□□□ -2.59
Trav4-3A0A0B4J1K1 AC116589.7-201ENSMUST00000221061 239 ntBASIC-1.11□□□□□ -2.59
Trav4-3A0A0B4J1K1 AC164117.1-201ENSMUST00000221726 239 ntBASIC-1.11□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm24233-201ENSMUST00000104317 122 ntBASIC-1.12□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm16359-201ENSMUST00000124511 289 ntBASIC-1.12□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm16358-201ENSMUST00000146046 210 ntBASIC-1.12□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm23020-201ENSMUST00000158766 253 ntBASIC-1.12□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm27993-201ENSMUST00000184362 85 ntBASIC-1.12□□□□□ -2.59
Trav4-3A0A0B4J1K1 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-1.12□□□□□ -2.59
Trav4-3A0A0B4J1K1 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-1.12□□□□□ -2.59
Trav4-3A0A0B4J1K1 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-1.12□□□□□ -2.59
Trav4-3A0A0B4J1K1 AC117656.1-201ENSMUST00000225826 339 ntBASIC-1.12□□□□□ -2.59
Trav4-3A0A0B4J1K1 AC158981.3-202ENSMUST00000228906 523 ntBASIC-1.12□□□□□ -2.59
Trav4-3A0A0B4J1K1 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
Trav4-3A0A0B4J1K1 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-1.13□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm23587-201ENSMUST00000157658 84 ntBASIC-1.13□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm26290-201ENSMUST00000158891 145 ntBASIC-1.13□□□□□ -2.59
Trav4-3A0A0B4J1K1 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-1.13□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm26073-201ENSMUST00000179906 127 ntBASIC-1.13□□□□□ -2.59
Trav4-3A0A0B4J1K1 Mir6377-201ENSMUST00000183760 114 ntBASIC-1.13□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm29535-201ENSMUST00000185723 109 ntBASIC-1.13□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm28143-201ENSMUST00000191082 109 ntBASIC-1.13□□□□□ -2.59
Trav4-3A0A0B4J1K1 Mir1949-202ENSMUST00000199259 70 ntBASIC-1.13□□□□□ -2.59
Trav4-3A0A0B4J1K1 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-1.13□□□□□ -2.59
Trav4-3A0A0B4J1K1 n-R5s8-201ENSMUST00000104121 118 ntBASIC-1.14□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm15030-201ENSMUST00000119804 484 ntBASIC-1.14□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm25596-201ENSMUST00000178368 107 ntBASIC-1.14□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm22450-201ENSMUST00000179641 107 ntBASIC-1.14□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm24508-201ENSMUST00000180104 107 ntBASIC-1.14□□□□□ -2.59
Trav4-3A0A0B4J1K1 Mir7651-201ENSMUST00000184154 64 ntBASIC-1.14□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm44327-201ENSMUST00000200068 117 ntBASIC-1.14□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-1.14□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm23614-201ENSMUST00000082598 107 ntBASIC-1.14□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-1.14□□□□□ -2.59
Trav4-3A0A0B4J1K1 Mir547-201ENSMUST00000102051 78 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm14536-201ENSMUST00000118324 138 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm15027-201ENSMUST00000120922 138 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm26278-201ENSMUST00000157098 132 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm25060-201ENSMUST00000157374 130 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm22340-201ENSMUST00000157717 114 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm24005-201ENSMUST00000158459 296 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Mir5124a-201ENSMUST00000175528 72 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm24308-201ENSMUST00000177773 114 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm25874-201ENSMUST00000178030 79 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm45508-201ENSMUST00000209298 299 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 AC164629.1-201ENSMUST00000220250 1113 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm25789-201ENSMUST00000083294 76 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Mir96-201ENSMUST00000083652 106 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm23104-201ENSMUST00000083722 104 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm10172-201ENSMUST00000085929 558 ntBASIC-1.15□□□□□ -2.59
Trav4-3A0A0B4J1K1 Gm13711-201ENSMUST00000119708 453 ntBASIC-1.16□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm25102-201ENSMUST00000122479 112 ntBASIC-1.16□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm22100-201ENSMUST00000157926 63 ntBASIC-1.16□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm22966-201ENSMUST00000157957 129 ntBASIC-1.16□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm22308-201ENSMUST00000177609 107 ntBASIC-1.16□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm37750-201ENSMUST00000193563 129 ntBASIC-1.16□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC-1.16□□□□□ -2.6
Trav4-3A0A0B4J1K1 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC-1.16□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm22005-201ENSMUST00000082795 141 ntBASIC-1.16□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm26123-201ENSMUST00000083363 135 ntBASIC-1.16□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm25787-201ENSMUST00000104709 92 ntBASIC-1.17□□□□□ -2.6
Trav4-3A0A0B4J1K1 Mup-ps22-201ENSMUST00000121611 243 ntBASIC-1.17□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm24909-201ENSMUST00000157290 280 ntBASIC-1.17□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm22328-201ENSMUST00000158074 112 ntBASIC-1.17□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
Trav4-3A0A0B4J1K1 Gm23375-201ENSMUST00000175407 83 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 76,532 protein–RNA pairs in 238.2 ms