Protein–RNA interactions for Protein: Q9JKU8

Lmx1a, LIM homeobox transcription factor 1-alpha, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1aQ9JKU8 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 Gm26914-201ENSMUST00000182262 223 ntBASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 Mir7091-201ENSMUST00000184075 79 ntBASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 Mir7661-201ENSMUST00000197023 61 ntBASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 Gm25929-201ENSMUST00000082784 107 ntBASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 Mir496a-201ENSMUST00000093627 79 ntBASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Gm11572-201ENSMUST00000119164 120 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Gm13967-201ENSMUST00000120404 380 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Gm26038-201ENSMUST00000158151 106 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Gm26213-201ENSMUST00000158582 110 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Gm22074-201ENSMUST00000158595 113 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Gm24277-201ENSMUST00000158661 104 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Mir3109-201ENSMUST00000175301 88 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Gm7958-201ENSMUST00000178255 468 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Gm7950-201ENSMUST00000179633 468 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Mir6380-201ENSMUST00000184334 81 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Gm24163-201ENSMUST00000093660 132 ntBASIC0.84□□□□□ -2.27
Lmx1aQ9JKU8 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Gm22021-201ENSMUST00000104353 107 ntBASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Gm23321-201ENSMUST00000104465 126 ntBASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Gm15379-201ENSMUST00000121224 648 ntBASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Gm22340-201ENSMUST00000157717 114 ntBASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Mir3061-201ENSMUST00000175129 91 ntBASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Gm43199-201ENSMUST00000200019 307 ntBASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 CT010505.1-201ENSMUST00000227026 396 ntBASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Gm24038-201ENSMUST00000082872 159 ntBASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Snord1a-201ENSMUST00000083160 74 ntBASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Mir155-201ENSMUST00000083463 65 ntBASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Gm24494-201ENSMUST00000083804 81 ntBASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Gm23851-201ENSMUST00000083831 103 ntBASIC0.83□□□□□ -2.28
Lmx1aQ9JKU8 Gm26135-201ENSMUST00000101993 72 ntBASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 Gm22215-201ENSMUST00000157558 96 ntBASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 Gm23262-201ENSMUST00000158323 168 ntBASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 Gm24818-201ENSMUST00000175093 161 ntBASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 Snord50b-201ENSMUST00000178497 72 ntBASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 Gm29229-201ENSMUST00000188874 323 ntBASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 Gm37997-201ENSMUST00000193515 267 ntBASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 Gm42719-201ENSMUST00000197393 355 ntBASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 Gm44473-201ENSMUST00000204039 152 ntBASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 Gm23055-201ENSMUST00000082805 94 ntBASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 Gm25683-201ENSMUST00000083940 131 ntBASIC0.82□□□□□ -2.28
Lmx1aQ9JKU8 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.81□□□□□ -2.28
Lmx1aQ9JKU8 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
Lmx1aQ9JKU8 Mir767-201ENSMUST00000103256 107 ntBASIC0.81□□□□□ -2.28
Lmx1aQ9JKU8 Gm14491-201ENSMUST00000121919 199 ntBASIC0.81□□□□□ -2.28
Lmx1aQ9JKU8 Gm23779-201ENSMUST00000157938 64 ntBASIC0.81□□□□□ -2.28
Lmx1aQ9JKU8 Gm22085-201ENSMUST00000158344 110 ntBASIC0.81□□□□□ -2.28
Lmx1aQ9JKU8 Gm44325-201ENSMUST00000196757 77 ntBASIC0.81□□□□□ -2.28
Lmx1aQ9JKU8 Mir219b-201ENSMUST00000198317 65 ntBASIC0.81□□□□□ -2.28
Lmx1aQ9JKU8 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.81□□□□□ -2.28
Lmx1aQ9JKU8 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.81□□□□□ -2.28
Lmx1aQ9JKU8 Gm25078-201ENSMUST00000082530 107 ntBASIC0.81□□□□□ -2.28
Lmx1aQ9JKU8 Gm23412-201ENSMUST00000083017 107 ntBASIC0.81□□□□□ -2.28
Lmx1aQ9JKU8 Gm22785-201ENSMUST00000104087 132 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm24555-201ENSMUST00000104548 124 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm12449-201ENSMUST00000117572 234 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm12785-201ENSMUST00000122052 172 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm22403-201ENSMUST00000174919 84 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Mir5104-201ENSMUST00000175319 94 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm7654-201ENSMUST00000186738 683 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm42855-201ENSMUST00000197388 253 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm45543-201ENSMUST00000209327 88 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm23404-201ENSMUST00000082543 97 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Snord42a-201ENSMUST00000082606 65 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Gm25128-201ENSMUST00000083339 76 ntBASIC0.8□□□□□ -2.28
Lmx1aQ9JKU8 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 Gm26074-201ENSMUST00000104063 129 ntBASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 Gm24283-201ENSMUST00000104233 107 ntBASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 Gm12647-201ENSMUST00000118977 265 ntBASIC0.79□□□□□ -2.28
Lmx1aQ9JKU8 Gm24192-201ENSMUST00000157978 145 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms