Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm12417-201ENSMUST00000119153 403 ntBASIC1.35□□□□□ -2.19
Scn5aQ9JJV9 Gm24262-201ENSMUST00000157431 144 ntBASIC1.35□□□□□ -2.19
Scn5aQ9JJV9 Gm23893-201ENSMUST00000158106 134 ntBASIC1.35□□□□□ -2.19
Scn5aQ9JJV9 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.35□□□□□ -2.19
Scn5aQ9JJV9 Gm20438-201ENSMUST00000174441 329 ntBASIC1.35□□□□□ -2.19
Scn5aQ9JJV9 Mir3057-201ENSMUST00000175040 91 ntBASIC1.35□□□□□ -2.19
Scn5aQ9JJV9 Mir376a-201ENSMUST00000197584 68 ntBASIC1.35□□□□□ -2.19
Scn5aQ9JJV9 Mir1291-201ENSMUST00000199842 117 ntBASIC1.35□□□□□ -2.19
Scn5aQ9JJV9 Gm42506-201ENSMUST00000202009 150 ntBASIC1.35□□□□□ -2.19
Scn5aQ9JJV9 Gm45456-201ENSMUST00000210841 243 ntBASIC1.35□□□□□ -2.19
Scn5aQ9JJV9 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.35□□□□□ -2.19
Scn5aQ9JJV9 Snord14a-201ENSMUST00000082807 87 ntBASIC1.35□□□□□ -2.19
Scn5aQ9JJV9 Snora34-201ENSMUST00000083402 138 ntBASIC1.35□□□□□ -2.19
Scn5aQ9JJV9 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.34□□□□□ -2.19
Scn5aQ9JJV9 Gm15861-201ENSMUST00000120979 339 ntBASIC1.34□□□□□ -2.19
Scn5aQ9JJV9 Gm14846-201ENSMUST00000121868 216 ntBASIC1.34□□□□□ -2.19
Scn5aQ9JJV9 Gm27723-201ENSMUST00000157398 63 ntBASIC1.34□□□□□ -2.19
Scn5aQ9JJV9 Gm27265-201ENSMUST00000183559 77 ntBASIC1.34□□□□□ -2.19
Scn5aQ9JJV9 Gm29308-201ENSMUST00000188863 315 ntBASIC1.34□□□□□ -2.19
Scn5aQ9JJV9 Gm33866-201ENSMUST00000196911 289 ntBASIC1.34□□□□□ -2.19
Scn5aQ9JJV9 Gm44490-201ENSMUST00000198566 127 ntBASIC1.34□□□□□ -2.19
Scn5aQ9JJV9 Gm45365-201ENSMUST00000209489 256 ntBASIC1.34□□□□□ -2.19
Scn5aQ9JJV9 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.34□□□□□ -2.19
Scn5aQ9JJV9 Gm24966-201ENSMUST00000082443 79 ntBASIC1.34□□□□□ -2.19
Scn5aQ9JJV9 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
Scn5aQ9JJV9 Gm26135-201ENSMUST00000101993 72 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Gm25992-201ENSMUST00000102437 109 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Gm14491-201ENSMUST00000121919 199 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Gm22279-201ENSMUST00000157200 93 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Gm24222-201ENSMUST00000158834 93 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Snord50b-201ENSMUST00000178497 72 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Gm7950-201ENSMUST00000179633 468 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Gm25012-201ENSMUST00000158396 164 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Gm7958-201ENSMUST00000178255 468 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Gm37338-201ENSMUST00000191986 127 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Gm42834-201ENSMUST00000196845 256 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Scn5aQ9JJV9 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Scn5aQ9JJV9 Gm25541-201ENSMUST00000116888 126 ntBASIC1.32□□□□□ -2.2
Scn5aQ9JJV9 Gm12686-201ENSMUST00000120546 397 ntBASIC1.32□□□□□ -2.2
Scn5aQ9JJV9 Gm22537-201ENSMUST00000158172 199 ntBASIC1.32□□□□□ -2.2
Scn5aQ9JJV9 Gm25658-201ENSMUST00000158472 128 ntBASIC1.32□□□□□ -2.2
Scn5aQ9JJV9 Gm25653-201ENSMUST00000158473 138 ntBASIC1.32□□□□□ -2.2
Scn5aQ9JJV9 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.32□□□□□ -2.2
Scn5aQ9JJV9 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.32□□□□□ -2.2
Scn5aQ9JJV9 Gm24252-201ENSMUST00000083700 132 ntBASIC1.32□□□□□ -2.2
Scn5aQ9JJV9 Gm12143-201ENSMUST00000119666 332 ntBASIC1.32□□□□□ -2.2
Scn5aQ9JJV9 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.32□□□□□ -2.2
Scn5aQ9JJV9 Gm25409-201ENSMUST00000083764 131 ntBASIC1.32□□□□□ -2.2
Scn5aQ9JJV9 Gm24630-201ENSMUST00000122768 106 ntBASIC1.31□□□□□ -2.2
Scn5aQ9JJV9 Gm26468-201ENSMUST00000158644 106 ntBASIC1.31□□□□□ -2.2
Scn5aQ9JJV9 Gm24277-201ENSMUST00000158661 104 ntBASIC1.31□□□□□ -2.2
Scn5aQ9JJV9 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.31□□□□□ -2.2
Scn5aQ9JJV9 Gm25930-201ENSMUST00000082785 107 ntBASIC1.31□□□□□ -2.2
Scn5aQ9JJV9 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Scn5aQ9JJV9 Gm14883-201ENSMUST00000120179 157 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Gm26479-201ENSMUST00000122620 106 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Gm23328-201ENSMUST00000157418 132 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Gm26150-201ENSMUST00000157426 151 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Gm2962-201ENSMUST00000159266 336 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Mir7683-201ENSMUST00000183842 61 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Gm9156-201ENSMUST00000189660 463 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Gm37801-201ENSMUST00000194754 274 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Gm26495-201ENSMUST00000083152 137 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Gm25789-201ENSMUST00000083294 76 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Gm22935-201ENSMUST00000103960 104 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Gm11794-201ENSMUST00000119446 237 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Mir6540-201ENSMUST00000184886 108 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Gm44384-201ENSMUST00000200208 114 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Gm29818-201ENSMUST00000218070 165 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.3□□□□□ -2.2
Scn5aQ9JJV9 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Scn5aQ9JJV9 Gm23836-201ENSMUST00000104434 129 ntBASIC1.29□□□□□ -2.2
Scn5aQ9JJV9 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.29□□□□□ -2.2
Scn5aQ9JJV9 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.29□□□□□ -2.2
Scn5aQ9JJV9 Gm24915-201ENSMUST00000157288 78 ntBASIC1.29□□□□□ -2.2
Scn5aQ9JJV9 Snora15-201ENSMUST00000177461 131 ntBASIC1.29□□□□□ -2.2
Scn5aQ9JJV9 Gm44989-201ENSMUST00000204749 217 ntBASIC1.29□□□□□ -2.2
Scn5aQ9JJV9 Gm22248-201ENSMUST00000082482 150 ntBASIC1.29□□□□□ -2.2
Scn5aQ9JJV9 Mir200b-201ENSMUST00000083615 70 ntBASIC1.29□□□□□ -2.2
Scn5aQ9JJV9 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.29□□□□□ -2.2
Scn5aQ9JJV9 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Scn5aQ9JJV9 Mir767-201ENSMUST00000103256 107 ntBASIC1.28□□□□□ -2.2
Scn5aQ9JJV9 Gm23172-201ENSMUST00000157160 124 ntBASIC1.28□□□□□ -2.2
Scn5aQ9JJV9 Gm25371-201ENSMUST00000158162 101 ntBASIC1.28□□□□□ -2.2
Scn5aQ9JJV9 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.28□□□□□ -2.2
Scn5aQ9JJV9 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.28□□□□□ -2.2
Scn5aQ9JJV9 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.28□□□□□ -2.2
Scn5aQ9JJV9 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.28□□□□□ -2.2
Scn5aQ9JJV9 Gm11351-202ENSMUST00000225724 478 ntBASIC1.28□□□□□ -2.2
Scn5aQ9JJV9 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms