Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm25051-201ENSMUST00000158602 249 ntBASIC1.9□□□□□ -2.11
Sf3a3Q9D554 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.9□□□□□ -2.11
Sf3a3Q9D554 Snord87-201ENSMUST00000175437 87 ntBASIC1.9□□□□□ -2.11
Sf3a3Q9D554 Mir669k-201ENSMUST00000177742 127 ntBASIC1.9□□□□□ -2.11
Sf3a3Q9D554 Gm5900-201ENSMUST00000179862 375 ntBASIC1.9□□□□□ -2.11
Sf3a3Q9D554 Gm25673-201ENSMUST00000179957 127 ntBASIC1.9□□□□□ -2.11
Sf3a3Q9D554 Mir7683-201ENSMUST00000183842 61 ntBASIC1.9□□□□□ -2.11
Sf3a3Q9D554 Gm37746-201ENSMUST00000193249 198 ntBASIC1.9□□□□□ -2.11
Sf3a3Q9D554 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.9□□□□□ -2.11
Sf3a3Q9D554 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.9□□□□□ -2.11
Sf3a3Q9D554 Gm24038-201ENSMUST00000082872 159 ntBASIC1.9□□□□□ -2.11
Sf3a3Q9D554 Snora3-201ENSMUST00000083082 132 ntBASIC1.9□□□□□ -2.11
Sf3a3Q9D554 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Sf3a3Q9D554 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
Sf3a3Q9D554 Gm25316-201ENSMUST00000116826 118 ntBASIC1.89□□□□□ -2.11
Sf3a3Q9D554 Gm23584-201ENSMUST00000157655 129 ntBASIC1.89□□□□□ -2.11
Sf3a3Q9D554 Gm23043-201ENSMUST00000157890 109 ntBASIC1.89□□□□□ -2.11
Sf3a3Q9D554 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.89□□□□□ -2.11
Sf3a3Q9D554 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.89□□□□□ -2.11
Sf3a3Q9D554 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.89□□□□□ -2.11
Sf3a3Q9D554 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.89□□□□□ -2.11
Sf3a3Q9D554 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Sf3a3Q9D554 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Sf3a3Q9D554 Gm24982-201ENSMUST00000104456 132 ntBASIC1.88□□□□□ -2.11
Sf3a3Q9D554 Gm22051-201ENSMUST00000117002 127 ntBASIC1.88□□□□□ -2.11
Sf3a3Q9D554 Gm22767-201ENSMUST00000158365 165 ntBASIC1.88□□□□□ -2.11
Sf3a3Q9D554 Mir3075-201ENSMUST00000175340 85 ntBASIC1.88□□□□□ -2.11
Sf3a3Q9D554 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.88□□□□□ -2.11
Sf3a3Q9D554 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Sf3a3Q9D554 Gm26015-201ENSMUST00000104402 125 ntBASIC1.87□□□□□ -2.11
Sf3a3Q9D554 Gm25884-201ENSMUST00000157782 62 ntBASIC1.87□□□□□ -2.11
Sf3a3Q9D554 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.87□□□□□ -2.11
Sf3a3Q9D554 Gm24816-201ENSMUST00000175311 151 ntBASIC1.87□□□□□ -2.11
Sf3a3Q9D554 Gm24656-201ENSMUST00000177548 132 ntBASIC1.87□□□□□ -2.11
Sf3a3Q9D554 Gm26864-201ENSMUST00000181346 156 ntBASIC1.87□□□□□ -2.11
Sf3a3Q9D554 Gm38183-201ENSMUST00000193189 205 ntBASIC1.87□□□□□ -2.11
Sf3a3Q9D554 Gm6796-201ENSMUST00000211919 243 ntBASIC1.87□□□□□ -2.11
Sf3a3Q9D554 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.87□□□□□ -2.11
Sf3a3Q9D554 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Sf3a3Q9D554 Gm16032-201ENSMUST00000118534 168 ntBASIC1.86□□□□□ -2.11
Sf3a3Q9D554 Gm28344-201ENSMUST00000185704 279 ntBASIC1.86□□□□□ -2.11
Sf3a3Q9D554 Gm29262-201ENSMUST00000190084 196 ntBASIC1.86□□□□□ -2.11
Sf3a3Q9D554 Gm24151-201ENSMUST00000082758 141 ntBASIC1.86□□□□□ -2.11
Sf3a3Q9D554 Gm24762-201ENSMUST00000083689 104 ntBASIC1.86□□□□□ -2.11
Sf3a3Q9D554 Mir127-201ENSMUST00000093568 70 ntBASIC1.86□□□□□ -2.11
Sf3a3Q9D554 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Sf3a3Q9D554 Mir466p-201ENSMUST00000103925 89 ntBASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Gm25090-201ENSMUST00000104000 132 ntBASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Gm23172-201ENSMUST00000157160 124 ntBASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Gm22586-201ENSMUST00000157507 122 ntBASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Gm25494-201ENSMUST00000158143 100 ntBASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Mir6916-201ENSMUST00000184514 63 ntBASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Gm42719-201ENSMUST00000197393 355 ntBASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Snord82-201ENSMUST00000082889 70 ntBASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Gm25410-201ENSMUST00000083758 137 ntBASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.85□□□□□ -2.11
Sf3a3Q9D554 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Sf3a3Q9D554 Gm14536-201ENSMUST00000118324 138 ntBASIC1.84□□□□□ -2.11
Sf3a3Q9D554 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.84□□□□□ -2.11
Sf3a3Q9D554 Gm15027-201ENSMUST00000120922 138 ntBASIC1.84□□□□□ -2.11
Sf3a3Q9D554 Gm14709-201ENSMUST00000121225 304 ntBASIC1.84□□□□□ -2.11
Sf3a3Q9D554 Gm23181-201ENSMUST00000158685 110 ntBASIC1.84□□□□□ -2.11
Sf3a3Q9D554 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.84□□□□□ -2.11
Sf3a3Q9D554 Mir6419-201ENSMUST00000184784 113 ntBASIC1.84□□□□□ -2.11
Sf3a3Q9D554 Gm44052-201ENSMUST00000203382 396 ntBASIC1.84□□□□□ -2.11
Sf3a3Q9D554 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.84□□□□□ -2.11
Sf3a3Q9D554 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC1.84□□□□□ -2.11
Sf3a3Q9D554 Gm24261-201ENSMUST00000083744 104 ntBASIC1.84□□□□□ -2.11
Sf3a3Q9D554 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Sf3a3Q9D554 Gm24783-201ENSMUST00000157639 100 ntBASIC1.83□□□□□ -2.12
Sf3a3Q9D554 Gm25223-201ENSMUST00000158200 110 ntBASIC1.83□□□□□ -2.12
Sf3a3Q9D554 Gm27399-201ENSMUST00000184250 78 ntBASIC1.83□□□□□ -2.12
Sf3a3Q9D554 Gm28537-201ENSMUST00000189026 315 ntBASIC1.83□□□□□ -2.12
Sf3a3Q9D554 Gm29631-201ENSMUST00000191065 315 ntBASIC1.83□□□□□ -2.12
Sf3a3Q9D554 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Sf3a3Q9D554 Snord89-201ENSMUST00000104516 110 ntBASIC1.82□□□□□ -2.12
Sf3a3Q9D554 Gm6025-201ENSMUST00000121517 201 ntBASIC1.82□□□□□ -2.12
Sf3a3Q9D554 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.82□□□□□ -2.12
Sf3a3Q9D554 Gm26345-201ENSMUST00000157534 120 ntBASIC1.82□□□□□ -2.12
Sf3a3Q9D554 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.82□□□□□ -2.12
Sf3a3Q9D554 Gm37778-201ENSMUST00000191732 190 ntBASIC1.82□□□□□ -2.12
Sf3a3Q9D554 Gm43587-201ENSMUST00000199590 204 ntBASIC1.82□□□□□ -2.12
Sf3a3Q9D554 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.82□□□□□ -2.12
Sf3a3Q9D554 Mir222-201ENSMUST00000083537 79 ntBASIC1.82□□□□□ -2.12
Sf3a3Q9D554 Gm25895-201ENSMUST00000083714 100 ntBASIC1.82□□□□□ -2.12
Sf3a3Q9D554 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Sf3a3Q9D554 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.81□□□□□ -2.12
Sf3a3Q9D554 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.81□□□□□ -2.12
Sf3a3Q9D554 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Sf3a3Q9D554 Gm25538-201ENSMUST00000101943 107 ntBASIC1.81□□□□□ -2.12
Sf3a3Q9D554 Gm23175-201ENSMUST00000104371 132 ntBASIC1.81□□□□□ -2.12
Sf3a3Q9D554 Gm15067-201ENSMUST00000119534 156 ntBASIC1.81□□□□□ -2.12
Sf3a3Q9D554 Gm24478-201ENSMUST00000157439 158 ntBASIC1.81□□□□□ -2.12
Sf3a3Q9D554 U6.1-201ENSMUST00000157443 101 ntBASIC1.81□□□□□ -2.12
Sf3a3Q9D554 Gm26024-201ENSMUST00000158657 322 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms