Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm6025-201ENSMUST00000121517 201 ntBASIC2.19□□□□□ -2.06
Ddx56Q9D0R4 Gm22145-201ENSMUST00000157396 148 ntBASIC2.19□□□□□ -2.06
Ddx56Q9D0R4 Mir7021-201ENSMUST00000197026 63 ntBASIC2.19□□□□□ -2.06
Ddx56Q9D0R4 Gm25142-201ENSMUST00000082698 107 ntBASIC2.19□□□□□ -2.06
Ddx56Q9D0R4 Gm24121-201ENSMUST00000102029 106 ntBASIC2.18□□□□□ -2.06
Ddx56Q9D0R4 Gm22051-201ENSMUST00000117002 127 ntBASIC2.18□□□□□ -2.06
Ddx56Q9D0R4 Gm14674-201ENSMUST00000117816 342 ntBASIC2.18□□□□□ -2.06
Ddx56Q9D0R4 Gm15067-201ENSMUST00000119534 156 ntBASIC2.18□□□□□ -2.06
Ddx56Q9D0R4 U6.1-201ENSMUST00000157443 101 ntBASIC2.18□□□□□ -2.06
Ddx56Q9D0R4 Mir7016-201ENSMUST00000184308 72 ntBASIC2.18□□□□□ -2.06
Ddx56Q9D0R4 Gm45116-201ENSMUST00000207392 275 ntBASIC2.18□□□□□ -2.06
Ddx56Q9D0R4 Gm25634-201ENSMUST00000082667 105 ntBASIC2.18□□□□□ -2.06
Ddx56Q9D0R4 Mir221-201ENSMUST00000083488 95 ntBASIC2.18□□□□□ -2.06
Ddx56Q9D0R4 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Ddx56Q9D0R4 Gm26339-201ENSMUST00000102368 99 ntBASIC2.17□□□□□ -2.06
Ddx56Q9D0R4 Gm25094-201ENSMUST00000103992 131 ntBASIC2.17□□□□□ -2.06
Ddx56Q9D0R4 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.17□□□□□ -2.06
Ddx56Q9D0R4 Gm23469-201ENSMUST00000157131 104 ntBASIC2.17□□□□□ -2.06
Ddx56Q9D0R4 Gm25460-201ENSMUST00000157954 127 ntBASIC2.17□□□□□ -2.06
Ddx56Q9D0R4 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.17□□□□□ -2.06
Ddx56Q9D0R4 Gm25538-201ENSMUST00000101943 107 ntBASIC2.16□□□□□ -2.06
Ddx56Q9D0R4 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Ddx56Q9D0R4 Gm23208-201ENSMUST00000158666 127 ntBASIC2.16□□□□□ -2.06
Ddx56Q9D0R4 Gm23342-201ENSMUST00000158958 115 ntBASIC2.16□□□□□ -2.06
Ddx56Q9D0R4 Gm29604-201ENSMUST00000187176 163 ntBASIC2.16□□□□□ -2.06
Ddx56Q9D0R4 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.16□□□□□ -2.06
Ddx56Q9D0R4 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.15□□□□□ -2.07
Ddx56Q9D0R4 Gm23230-201ENSMUST00000157298 133 ntBASIC2.15□□□□□ -2.07
Ddx56Q9D0R4 Gm38183-201ENSMUST00000193189 205 ntBASIC2.15□□□□□ -2.07
Ddx56Q9D0R4 Gm45013-201ENSMUST00000206883 178 ntBASIC2.15□□□□□ -2.07
Ddx56Q9D0R4 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.15□□□□□ -2.07
Ddx56Q9D0R4 Gm24098-201ENSMUST00000102075 109 ntBASIC2.14□□□□□ -2.07
Ddx56Q9D0R4 Gm25381-201ENSMUST00000102078 109 ntBASIC2.14□□□□□ -2.07
Ddx56Q9D0R4 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.14□□□□□ -2.07
Ddx56Q9D0R4 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.14□□□□□ -2.07
Ddx56Q9D0R4 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ddx56Q9D0R4 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ddx56Q9D0R4 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.13□□□□□ -2.07
Ddx56Q9D0R4 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.13□□□□□ -2.07
Ddx56Q9D0R4 Gm24867-201ENSMUST00000104161 107 ntBASIC2.13□□□□□ -2.07
Ddx56Q9D0R4 Mir344e-201ENSMUST00000104677 66 ntBASIC2.13□□□□□ -2.07
Ddx56Q9D0R4 Trav20-201ENSMUST00000142754 347 ntBASIC2.13□□□□□ -2.07
Ddx56Q9D0R4 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.13□□□□□ -2.07
Ddx56Q9D0R4 Gm23258-201ENSMUST00000158319 106 ntBASIC2.13□□□□□ -2.07
Ddx56Q9D0R4 Gm23141-201ENSMUST00000178682 94 ntBASIC2.13□□□□□ -2.07
Ddx56Q9D0R4 Gm44384-201ENSMUST00000200208 114 ntBASIC2.13□□□□□ -2.07
Ddx56Q9D0R4 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC2.13□□□□□ -2.07
Ddx56Q9D0R4 Gm44052-201ENSMUST00000203382 396 ntBASIC2.13□□□□□ -2.07
Ddx56Q9D0R4 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.13□□□□□ -2.07
Ddx56Q9D0R4 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.12□□□□□ -2.07
Ddx56Q9D0R4 Gm22494-201ENSMUST00000104495 128 ntBASIC2.12□□□□□ -2.07
Ddx56Q9D0R4 Gm23170-201ENSMUST00000157158 106 ntBASIC2.12□□□□□ -2.07
Ddx56Q9D0R4 Gm22727-201ENSMUST00000158090 116 ntBASIC2.12□□□□□ -2.07
Ddx56Q9D0R4 Mir3092-201ENSMUST00000174954 96 ntBASIC2.12□□□□□ -2.07
Ddx56Q9D0R4 Gm24366-201ENSMUST00000175383 86 ntBASIC2.12□□□□□ -2.07
Ddx56Q9D0R4 Snord14a-201ENSMUST00000082807 87 ntBASIC2.12□□□□□ -2.07
Ddx56Q9D0R4 Gm22744-201ENSMUST00000083444 65 ntBASIC2.12□□□□□ -2.07
Ddx56Q9D0R4 Mir30d-201ENSMUST00000083503 82 ntBASIC2.12□□□□□ -2.07
Ddx56Q9D0R4 Gm25627-201ENSMUST00000084003 153 ntBASIC2.12□□□□□ -2.07
Ddx56Q9D0R4 Gm12941-201ENSMUST00000117934 220 ntBASIC2.11□□□□□ -2.07
Ddx56Q9D0R4 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.11□□□□□ -2.07
Ddx56Q9D0R4 Gm26345-201ENSMUST00000157534 120 ntBASIC2.11□□□□□ -2.07
Ddx56Q9D0R4 Gm25423-201ENSMUST00000157609 107 ntBASIC2.11□□□□□ -2.07
Ddx56Q9D0R4 Gm23545-201ENSMUST00000158205 104 ntBASIC2.11□□□□□ -2.07
Ddx56Q9D0R4 Gm23963-201ENSMUST00000179603 77 ntBASIC2.11□□□□□ -2.07
Ddx56Q9D0R4 Gm45150-201ENSMUST00000206051 467 ntBASIC2.11□□□□□ -2.07
Ddx56Q9D0R4 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.11□□□□□ -2.07
Ddx56Q9D0R4 Mir34a-201ENSMUST00000083559 102 ntBASIC2.11□□□□□ -2.07
Ddx56Q9D0R4 Snord7-201ENSMUST00000083781 97 ntBASIC2.11□□□□□ -2.07
Ddx56Q9D0R4 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Ddx56Q9D0R4 Gm14536-201ENSMUST00000118324 138 ntBASIC2.1□□□□□ -2.07
Ddx56Q9D0R4 Gm15027-201ENSMUST00000120922 138 ntBASIC2.1□□□□□ -2.07
Ddx56Q9D0R4 Gm23852-201ENSMUST00000158376 77 ntBASIC2.1□□□□□ -2.07
Ddx56Q9D0R4 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
Ddx56Q9D0R4 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.1□□□□□ -2.07
Ddx56Q9D0R4 Mir384-201ENSMUST00000083565 88 ntBASIC2.1□□□□□ -2.07
Ddx56Q9D0R4 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Ddx56Q9D0R4 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Ddx56Q9D0R4 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ddx56Q9D0R4 Snord89-201ENSMUST00000104516 110 ntBASIC2.09□□□□□ -2.07
Ddx56Q9D0R4 Gm26342-201ENSMUST00000104557 129 ntBASIC2.09□□□□□ -2.07
Ddx56Q9D0R4 Gm23551-201ENSMUST00000116852 121 ntBASIC2.09□□□□□ -2.07
Ddx56Q9D0R4 Gm12449-201ENSMUST00000117572 234 ntBASIC2.09□□□□□ -2.07
Ddx56Q9D0R4 Gm26482-201ENSMUST00000158015 62 ntBASIC2.09□□□□□ -2.07
Ddx56Q9D0R4 Gm22767-201ENSMUST00000158365 165 ntBASIC2.09□□□□□ -2.07
Ddx56Q9D0R4 Gm27443-201ENSMUST00000184660 98 ntBASIC2.09□□□□□ -2.07
Ddx56Q9D0R4 Gm44325-201ENSMUST00000196757 77 ntBASIC2.09□□□□□ -2.07
Ddx56Q9D0R4 Gm44057-201ENSMUST00000204547 96 ntBASIC2.09□□□□□ -2.07
Ddx56Q9D0R4 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Ddx56Q9D0R4 Gm22082-201ENSMUST00000157587 161 ntBASIC2.08□□□□□ -2.08
Ddx56Q9D0R4 Gm25015-201ENSMUST00000158400 128 ntBASIC2.08□□□□□ -2.08
Ddx56Q9D0R4 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.08□□□□□ -2.08
Ddx56Q9D0R4 Gm23813-201ENSMUST00000175153 77 ntBASIC2.08□□□□□ -2.08
Ddx56Q9D0R4 Gm27476-201ENSMUST00000183366 104 ntBASIC2.08□□□□□ -2.08
Ddx56Q9D0R4 Mir6917-201ENSMUST00000184111 61 ntBASIC2.08□□□□□ -2.08
Ddx56Q9D0R4 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC2.08□□□□□ -2.08
Ddx56Q9D0R4 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.08□□□□□ -2.08
Ddx56Q9D0R4 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ddx56Q9D0R4 Snord19-201ENSMUST00000104609 76 ntBASIC2.07□□□□□ -2.08
Ddx56Q9D0R4 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 1316.7 ms