Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm27700-201ENSMUST00000185003 81 ntBASIC3.04□□□□□ -1.92
Clp1Q99LI9 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC3.04□□□□□ -1.92
Clp1Q99LI9 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Clp1Q99LI9 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Clp1Q99LI9 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Clp1Q99LI9 Gm24049-201ENSMUST00000102409 100 ntBASIC3.03□□□□□ -1.92
Clp1Q99LI9 Mir466k-201ENSMUST00000116774 122 ntBASIC3.03□□□□□ -1.92
Clp1Q99LI9 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.03□□□□□ -1.92
Clp1Q99LI9 Gm22664-201ENSMUST00000158719 105 ntBASIC3.03□□□□□ -1.92
Clp1Q99LI9 Gm25996-201ENSMUST00000175393 117 ntBASIC3.03□□□□□ -1.92
Clp1Q99LI9 Mir7242-201ENSMUST00000183710 79 ntBASIC3.03□□□□□ -1.92
Clp1Q99LI9 Gm28900-201ENSMUST00000185232 156 ntBASIC3.03□□□□□ -1.92
Clp1Q99LI9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC3.03□□□□□ -1.92
Clp1Q99LI9 Gm18665-201ENSMUST00000189783 270 ntBASIC3.03□□□□□ -1.92
Clp1Q99LI9 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.03□□□□□ -1.92
Clp1Q99LI9 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.03□□□□□ -1.92
Clp1Q99LI9 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.03□□□□□ -1.92
Clp1Q99LI9 Mir301-201ENSMUST00000083655 86 ntBASIC3.03□□□□□ -1.92
Clp1Q99LI9 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.03□□□□□ -1.92
Clp1Q99LI9 Gm13246-201ENSMUST00000120994 315 ntBASIC3.02□□□□□ -1.93
Clp1Q99LI9 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Clp1Q99LI9 Gm23854-201ENSMUST00000158378 108 ntBASIC3.02□□□□□ -1.93
Clp1Q99LI9 Gm43381-201ENSMUST00000198553 165 ntBASIC3.02□□□□□ -1.93
Clp1Q99LI9 Gm44976-201ENSMUST00000205543 261 ntBASIC3.02□□□□□ -1.93
Clp1Q99LI9 Gm24038-201ENSMUST00000082872 159 ntBASIC3.02□□□□□ -1.93
Clp1Q99LI9 Gm24616-201ENSMUST00000083274 139 ntBASIC3.02□□□□□ -1.93
Clp1Q99LI9 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Clp1Q99LI9 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Clp1Q99LI9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Clp1Q99LI9 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Clp1Q99LI9 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.02□□□□□ -1.93
Clp1Q99LI9 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Clp1Q99LI9 AC158598.2-201ENSMUST00000213397 3832 ntBASIC3.01□□□□□ -1.93
Clp1Q99LI9 Gm20718-201ENSMUST00000176058 259 ntBASIC3.01□□□□□ -1.93
Clp1Q99LI9 Gm45492-201ENSMUST00000211611 288 ntBASIC3.01□□□□□ -1.93
Clp1Q99LI9 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.01□□□□□ -1.93
Clp1Q99LI9 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.01□□□□□ -1.93
Clp1Q99LI9 Gm23249-201ENSMUST00000083369 161 ntBASIC3.01□□□□□ -1.93
Clp1Q99LI9 Gm22681-201ENSMUST00000083853 106 ntBASIC3.01□□□□□ -1.93
Clp1Q99LI9 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Clp1Q99LI9 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Clp1Q99LI9 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Clp1Q99LI9 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Clp1Q99LI9 Mir499-201ENSMUST00000102357 79 ntBASIC3□□□□□ -1.93
Clp1Q99LI9 Gm24171-201ENSMUST00000104126 131 ntBASIC3□□□□□ -1.93
Clp1Q99LI9 Gm24274-201ENSMUST00000116787 124 ntBASIC3□□□□□ -1.93
Clp1Q99LI9 Gm22279-201ENSMUST00000157200 93 ntBASIC3□□□□□ -1.93
Clp1Q99LI9 Gm24291-201ENSMUST00000157633 162 ntBASIC3□□□□□ -1.93
Clp1Q99LI9 Gm25884-201ENSMUST00000157782 62 ntBASIC3□□□□□ -1.93
Clp1Q99LI9 Gm26157-201ENSMUST00000158974 126 ntBASIC3□□□□□ -1.93
Clp1Q99LI9 Gm42719-201ENSMUST00000197393 355 ntBASIC3□□□□□ -1.93
Clp1Q99LI9 Gm44903-201ENSMUST00000206840 130 ntBASIC3□□□□□ -1.93
Clp1Q99LI9 CT025579.1-201ENSMUST00000223779 366 ntBASIC3□□□□□ -1.93
Clp1Q99LI9 Gm22306-201ENSMUST00000082692 107 ntBASIC3□□□□□ -1.93
Clp1Q99LI9 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Clp1Q99LI9 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Clp1Q99LI9 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Clp1Q99LI9 Gm26342-201ENSMUST00000104557 129 ntBASIC2.99□□□□□ -1.93
Clp1Q99LI9 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Clp1Q99LI9 Mir201-201ENSMUST00000083470 66 ntBASIC2.99□□□□□ -1.93
Clp1Q99LI9 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Clp1Q99LI9 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Clp1Q99LI9 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Clp1Q99LI9 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Clp1Q99LI9 Gm15733-201ENSMUST00000132957 242 ntBASIC2.98□□□□□ -1.93
Clp1Q99LI9 Gm24443-201ENSMUST00000157242 132 ntBASIC2.98□□□□□ -1.93
Clp1Q99LI9 Gm22768-201ENSMUST00000158366 153 ntBASIC2.98□□□□□ -1.93
Clp1Q99LI9 Gm22163-201ENSMUST00000158408 135 ntBASIC2.98□□□□□ -1.93
Clp1Q99LI9 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Clp1Q99LI9 Gm44358-201ENSMUST00000196301 98 ntBASIC2.98□□□□□ -1.93
Clp1Q99LI9 Gm8219-201ENSMUST00000218309 242 ntBASIC2.98□□□□□ -1.93
Clp1Q99LI9 Gm24461-201ENSMUST00000082735 103 ntBASIC2.98□□□□□ -1.93
Clp1Q99LI9 Snord61-201ENSMUST00000083176 71 ntBASIC2.98□□□□□ -1.93
Clp1Q99LI9 Gm24410-201ENSMUST00000083433 107 ntBASIC2.98□□□□□ -1.93
Clp1Q99LI9 Mir429-201ENSMUST00000083493 83 ntBASIC2.98□□□□□ -1.93
Clp1Q99LI9 Mir34a-201ENSMUST00000083559 102 ntBASIC2.98□□□□□ -1.93
Clp1Q99LI9 Gm24449-201ENSMUST00000083985 106 ntBASIC2.98□□□□□ -1.93
Clp1Q99LI9 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.98□□□□□ -1.93
Clp1Q99LI9 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Clp1Q99LI9 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Clp1Q99LI9 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Clp1Q99LI9 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Clp1Q99LI9 Gm45791-201ENSMUST00000212908 352 ntBASIC2.97□□□□□ -1.93
Clp1Q99LI9 Gm24705-201ENSMUST00000082808 107 ntBASIC2.97□□□□□ -1.93
Clp1Q99LI9 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Clp1Q99LI9 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Clp1Q99LI9 Gm26011-201ENSMUST00000104410 104 ntBASIC2.96□□□□□ -1.94
Clp1Q99LI9 Snord93-201ENSMUST00000175580 71 ntBASIC2.96□□□□□ -1.94
Clp1Q99LI9 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.96□□□□□ -1.94
Clp1Q99LI9 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.96□□□□□ -1.94
Clp1Q99LI9 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.96□□□□□ -1.94
Clp1Q99LI9 Gm25627-201ENSMUST00000084003 153 ntBASIC2.96□□□□□ -1.94
Clp1Q99LI9 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Clp1Q99LI9 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
Clp1Q99LI9 Gm24717-201ENSMUST00000157522 124 ntBASIC2.95□□□□□ -1.94
Clp1Q99LI9 Gm25882-201ENSMUST00000157784 85 ntBASIC2.95□□□□□ -1.94
Clp1Q99LI9 Gm24747-201ENSMUST00000157835 87 ntBASIC2.95□□□□□ -1.94
Clp1Q99LI9 Gm23567-201ENSMUST00000178005 107 ntBASIC2.95□□□□□ -1.94
Clp1Q99LI9 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.95□□□□□ -1.94
Clp1Q99LI9 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms