Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Gm25879-201ENSMUST00000104330 107 ntBASIC2.19□□□□□ -2.06
SfpqQ8VIJ6 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.19□□□□□ -2.06
SfpqQ8VIJ6 Gm24075-201ENSMUST00000158175 72 ntBASIC2.19□□□□□ -2.06
SfpqQ8VIJ6 Gm23182-201ENSMUST00000158688 135 ntBASIC2.19□□□□□ -2.06
SfpqQ8VIJ6 Gm26291-201ENSMUST00000158889 137 ntBASIC2.19□□□□□ -2.06
SfpqQ8VIJ6 Mir7016-201ENSMUST00000184308 72 ntBASIC2.19□□□□□ -2.06
SfpqQ8VIJ6 Mir7215-201ENSMUST00000200383 51 ntBASIC2.19□□□□□ -2.06
SfpqQ8VIJ6 Gm24977-201ENSMUST00000083106 163 ntBASIC2.19□□□□□ -2.06
SfpqQ8VIJ6 Gm26493-201ENSMUST00000083155 136 ntBASIC2.19□□□□□ -2.06
SfpqQ8VIJ6 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Gm24896-201ENSMUST00000122741 135 ntBASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Gm24237-201ENSMUST00000157790 132 ntBASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Gm23277-201ENSMUST00000157914 136 ntBASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Gm22535-201ENSMUST00000158174 119 ntBASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Gm27369-201ENSMUST00000185182 71 ntBASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Gm44470-201ENSMUST00000203913 142 ntBASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Gm6109-201ENSMUST00000223297 348 ntBASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Gm23239-201ENSMUST00000083006 181 ntBASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Gm22972-201ENSMUST00000083297 131 ntBASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Gm23246-201ENSMUST00000083371 67 ntBASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SfpqQ8VIJ6 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.17□□□□□ -2.06
SfpqQ8VIJ6 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SfpqQ8VIJ6 Gm24122-201ENSMUST00000104107 132 ntBASIC2.17□□□□□ -2.06
SfpqQ8VIJ6 Gm24605-201ENSMUST00000104772 96 ntBASIC2.17□□□□□ -2.06
SfpqQ8VIJ6 Gm23230-201ENSMUST00000157298 133 ntBASIC2.17□□□□□ -2.06
SfpqQ8VIJ6 Gm22500-201ENSMUST00000158982 99 ntBASIC2.17□□□□□ -2.06
SfpqQ8VIJ6 Gm28900-201ENSMUST00000185232 156 ntBASIC2.17□□□□□ -2.06
SfpqQ8VIJ6 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.17□□□□□ -2.06
SfpqQ8VIJ6 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.17□□□□□ -2.06
SfpqQ8VIJ6 Gm5010-201ENSMUST00000213131 260 ntBASIC2.17□□□□□ -2.06
SfpqQ8VIJ6 Gm24929-201ENSMUST00000083403 139 ntBASIC2.17□□□□□ -2.06
SfpqQ8VIJ6 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm22148-201ENSMUST00000104445 107 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm23469-201ENSMUST00000157131 104 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm22557-201ENSMUST00000157804 102 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm23342-201ENSMUST00000158958 115 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm16546-201ENSMUST00000159442 355 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Mir3075-201ENSMUST00000175340 85 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm22699-201ENSMUST00000175376 105 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Mir5118-201ENSMUST00000175551 67 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm26337-201ENSMUST00000178000 79 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm25933-201ENSMUST00000178943 108 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm3724-201ENSMUST00000197957 349 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm23722-201ENSMUST00000083002 130 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SfpqQ8VIJ6 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.15□□□□□ -2.06
SfpqQ8VIJ6 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
SfpqQ8VIJ6 Snord89-201ENSMUST00000104516 110 ntBASIC2.15□□□□□ -2.07
SfpqQ8VIJ6 Gm13885-201ENSMUST00000117569 187 ntBASIC2.15□□□□□ -2.07
SfpqQ8VIJ6 Gm13922-201ENSMUST00000119505 156 ntBASIC2.15□□□□□ -2.07
SfpqQ8VIJ6 Gm22159-201ENSMUST00000158412 130 ntBASIC2.15□□□□□ -2.07
SfpqQ8VIJ6 Gm23194-201ENSMUST00000158813 105 ntBASIC2.15□□□□□ -2.07
SfpqQ8VIJ6 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.15□□□□□ -2.07
SfpqQ8VIJ6 Gm24816-201ENSMUST00000175311 151 ntBASIC2.15□□□□□ -2.07
SfpqQ8VIJ6 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SfpqQ8VIJ6 Gm42623-201ENSMUST00000197225 379 ntBASIC2.15□□□□□ -2.07
SfpqQ8VIJ6 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SfpqQ8VIJ6 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm23011-201ENSMUST00000104148 132 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm23651-201ENSMUST00000116755 120 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm6025-201ENSMUST00000121517 201 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm22586-201ENSMUST00000157507 122 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm24010-201ENSMUST00000157731 282 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm25488-201ENSMUST00000158728 118 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm16162-201ENSMUST00000162296 297 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Mir28b-201ENSMUST00000175399 80 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm20613-201ENSMUST00000175828 345 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm23922-201ENSMUST00000178792 79 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm24657-201ENSMUST00000180085 79 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm22996-201ENSMUST00000180236 79 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SfpqQ8VIJ6 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SfpqQ8VIJ6 Gm26293-201ENSMUST00000104170 84 ntBASIC2.13□□□□□ -2.07
SfpqQ8VIJ6 Mir1298-201ENSMUST00000116681 98 ntBASIC2.13□□□□□ -2.07
SfpqQ8VIJ6 Gm25888-201ENSMUST00000157778 302 ntBASIC2.13□□□□□ -2.07
SfpqQ8VIJ6 Gm26403-201ENSMUST00000158500 105 ntBASIC2.13□□□□□ -2.07
SfpqQ8VIJ6 Gm23813-201ENSMUST00000175153 77 ntBASIC2.13□□□□□ -2.07
SfpqQ8VIJ6 Mir21b-201ENSMUST00000184317 108 ntBASIC2.13□□□□□ -2.07
SfpqQ8VIJ6 Mir6376-201ENSMUST00000185149 131 ntBASIC2.13□□□□□ -2.07
SfpqQ8VIJ6 Gm44308-201ENSMUST00000197080 99 ntBASIC2.13□□□□□ -2.07
SfpqQ8VIJ6 Gm43865-201ENSMUST00000204721 127 ntBASIC2.13□□□□□ -2.07
SfpqQ8VIJ6 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.13□□□□□ -2.07
SfpqQ8VIJ6 AL627387.1-201ENSMUST00000226063 250 ntBASIC2.13□□□□□ -2.07
SfpqQ8VIJ6 Gm25812-201ENSMUST00000082751 103 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms