Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Snord14d-201ENSMUST00000083424 86 ntBASIC2.56□□□□□ -2
Ccdc9Q8VC31 Gm12443-201ENSMUST00000122308 323 ntBASIC2.55□□□□□ -2
Ccdc9Q8VC31 Gm26482-201ENSMUST00000158015 62 ntBASIC2.55□□□□□ -2
Ccdc9Q8VC31 Gm17067-202ENSMUST00000180131 123 ntBASIC2.55□□□□□ -2
Ccdc9Q8VC31 Gm43602-201ENSMUST00000196772 300 ntBASIC2.55□□□□□ -2
Ccdc9Q8VC31 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.55□□□□□ -2
Ccdc9Q8VC31 Gm25634-201ENSMUST00000082667 105 ntBASIC2.55□□□□□ -2
Ccdc9Q8VC31 Gm24453-201ENSMUST00000083346 76 ntBASIC2.55□□□□□ -2
Ccdc9Q8VC31 Mir300-201ENSMUST00000083485 79 ntBASIC2.55□□□□□ -2
Ccdc9Q8VC31 Gm10172-201ENSMUST00000085929 558 ntBASIC2.55□□□□□ -2
Ccdc9Q8VC31 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc9Q8VC31 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Ccdc9Q8VC31 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm24276-201ENSMUST00000102181 110 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm23492-201ENSMUST00000116837 115 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm13756-201ENSMUST00000117618 222 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm24916-201ENSMUST00000157287 79 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm22316-201ENSMUST00000158012 216 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm24075-201ENSMUST00000158175 72 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm22382-201ENSMUST00000158185 130 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm22664-201ENSMUST00000158719 105 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm16584-201ENSMUST00000159267 189 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm4468-201ENSMUST00000170206 294 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Mir6950-201ENSMUST00000184438 73 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.54□□□□□ -2
Ccdc9Q8VC31 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm23947-201ENSMUST00000093636 107 ntBASIC2.54□□□□□ -2
Ccdc9Q8VC31 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ccdc9Q8VC31 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ccdc9Q8VC31 Gm23803-201ENSMUST00000104610 132 ntBASIC2.53□□□□□ -2
Ccdc9Q8VC31 Mir3096-201ENSMUST00000116685 71 ntBASIC2.53□□□□□ -2
Ccdc9Q8VC31 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.53□□□□□ -2
Ccdc9Q8VC31 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ccdc9Q8VC31 Gm22557-201ENSMUST00000157804 102 ntBASIC2.53□□□□□ -2
Ccdc9Q8VC31 Gm24816-201ENSMUST00000175311 151 ntBASIC2.53□□□□□ -2
Ccdc9Q8VC31 Gm33866-201ENSMUST00000196911 289 ntBASIC2.53□□□□□ -2
Ccdc9Q8VC31 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.53□□□□□ -2
Ccdc9Q8VC31 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Gm12143-201ENSMUST00000119666 332 ntBASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Gm25269-201ENSMUST00000122601 104 ntBASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Gm24141-201ENSMUST00000122776 115 ntBASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Gm24010-201ENSMUST00000157731 282 ntBASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Gm22075-201ENSMUST00000158599 192 ntBASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Gm24053-201ENSMUST00000158620 105 ntBASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Gm44352-201ENSMUST00000196358 110 ntBASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Gm45116-201ENSMUST00000207392 275 ntBASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Gm45492-201ENSMUST00000211611 288 ntBASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Gm25788-201ENSMUST00000082721 131 ntBASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Ccdc9Q8VC31 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Ccdc9Q8VC31 Mir450b-201ENSMUST00000102095 82 ntBASIC2.51□□□□□ -2.01
Ccdc9Q8VC31 Gm23013-201ENSMUST00000104146 106 ntBASIC2.51□□□□□ -2.01
Ccdc9Q8VC31 Gm25393-201ENSMUST00000157336 285 ntBASIC2.51□□□□□ -2.01
Ccdc9Q8VC31 Gm22967-201ENSMUST00000157956 239 ntBASIC2.51□□□□□ -2.01
Ccdc9Q8VC31 Gm22666-201ENSMUST00000158717 164 ntBASIC2.51□□□□□ -2.01
Ccdc9Q8VC31 Gm22093-201ENSMUST00000158980 111 ntBASIC2.51□□□□□ -2.01
Ccdc9Q8VC31 Gm28000-201ENSMUST00000184380 85 ntBASIC2.51□□□□□ -2.01
Ccdc9Q8VC31 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.51□□□□□ -2.01
Ccdc9Q8VC31 Mir222-201ENSMUST00000083537 79 ntBASIC2.51□□□□□ -2.01
Ccdc9Q8VC31 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ccdc9Q8VC31 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.51□□□□□ -2.01
Ccdc9Q8VC31 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Gm22845-201ENSMUST00000157712 104 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Gm17113-201ENSMUST00000170118 171 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Gm24926-201ENSMUST00000178053 79 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Gm22632-201ENSMUST00000178266 79 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Gm28900-201ENSMUST00000185232 156 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Gm29167-201ENSMUST00000190024 377 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Gm38298-201ENSMUST00000193578 118 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Gm42739-201ENSMUST00000200687 226 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Gm23462-201ENSMUST00000083264 104 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Gm22681-201ENSMUST00000083853 106 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Mir488-201ENSMUST00000093595 109 ntBASIC2.5□□□□□ -2.01
Ccdc9Q8VC31 Gm26015-201ENSMUST00000104402 125 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Gm25866-201ENSMUST00000158245 112 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Gm24878-201ENSMUST00000158782 104 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Gm25380-201ENSMUST00000175463 107 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Gm24641-201ENSMUST00000178055 107 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Gm25484-201ENSMUST00000178217 107 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Gm26138-201ENSMUST00000179236 107 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Gm22821-201ENSMUST00000179288 107 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Gm5900-201ENSMUST00000179862 375 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Gm27271-201ENSMUST00000183509 170 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Gm27991-201ENSMUST00000184804 137 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Gm9251-201ENSMUST00000197202 628 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Gm23140-201ENSMUST00000082487 107 ntBASIC2.49□□□□□ -2.01
Ccdc9Q8VC31 Gm24355-201ENSMUST00000082858 122 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms