Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm34139-201ENSMUST00000196166 294 ntBASIC2.24□□□□□ -2.05
Syne4Q8CII8 Mir7232-201ENSMUST00000197929 74 ntBASIC2.24□□□□□ -2.05
Syne4Q8CII8 Mir3069-201ENSMUST00000198802 65 ntBASIC2.24□□□□□ -2.05
Syne4Q8CII8 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.24□□□□□ -2.05
Syne4Q8CII8 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.24□□□□□ -2.05
Syne4Q8CII8 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.24□□□□□ -2.05
Syne4Q8CII8 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Syne4Q8CII8 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.23□□□□□ -2.05
Syne4Q8CII8 Gm14588-201ENSMUST00000119895 172 ntBASIC2.23□□□□□ -2.05
Syne4Q8CII8 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.23□□□□□ -2.05
Syne4Q8CII8 Gm25390-201ENSMUST00000157341 103 ntBASIC2.23□□□□□ -2.05
Syne4Q8CII8 Gm25015-201ENSMUST00000158400 128 ntBASIC2.23□□□□□ -2.05
Syne4Q8CII8 Mir429-201ENSMUST00000083493 83 ntBASIC2.23□□□□□ -2.05
Syne4Q8CII8 Gm16510-201ENSMUST00000153501 249 ntBASIC2.22□□□□□ -2.05
Syne4Q8CII8 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Syne4Q8CII8 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC2.22□□□□□ -2.05
Syne4Q8CII8 Gm45508-201ENSMUST00000209298 299 ntBASIC2.22□□□□□ -2.05
Syne4Q8CII8 Gm25513-201ENSMUST00000083861 162 ntBASIC2.22□□□□□ -2.05
Syne4Q8CII8 Gm25832-201ENSMUST00000104140 130 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 Gm25316-201ENSMUST00000116826 118 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 Gm14838-201ENSMUST00000118913 248 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 Gm22217-201ENSMUST00000157556 313 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 Gm23545-201ENSMUST00000158205 104 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 Gm23854-201ENSMUST00000158378 108 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 Gm25368-201ENSMUST00000158847 131 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 Gm26864-201ENSMUST00000181346 156 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 Gm27585-201ENSMUST00000183717 199 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 Mir7678-201ENSMUST00000185076 71 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 Mir155-201ENSMUST00000083463 65 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.21□□□□□ -2.06
Syne4Q8CII8 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Syne4Q8CII8 Gm12080-201ENSMUST00000119821 1883 ntBASIC2.2□□□□□ -2.06
Syne4Q8CII8 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Syne4Q8CII8 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Syne4Q8CII8 Snord19-201ENSMUST00000104609 76 ntBASIC2.2□□□□□ -2.06
Syne4Q8CII8 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.2□□□□□ -2.06
Syne4Q8CII8 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.2□□□□□ -2.06
Syne4Q8CII8 Gm44853-201ENSMUST00000209070 250 ntBASIC2.2□□□□□ -2.06
Syne4Q8CII8 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.2□□□□□ -2.06
Syne4Q8CII8 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.2□□□□□ -2.06
Syne4Q8CII8 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.2□□□□□ -2.06
Syne4Q8CII8 Gm25813-201ENSMUST00000082748 191 ntBASIC2.2□□□□□ -2.06
Syne4Q8CII8 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Syne4Q8CII8 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Syne4Q8CII8 Gm15861-201ENSMUST00000120979 339 ntBASIC2.19□□□□□ -2.06
Syne4Q8CII8 Gm13797-201ENSMUST00000121792 120 ntBASIC2.19□□□□□ -2.06
Syne4Q8CII8 Gm15214-201ENSMUST00000122155 470 ntBASIC2.19□□□□□ -2.06
Syne4Q8CII8 Gm26482-201ENSMUST00000158015 62 ntBASIC2.19□□□□□ -2.06
Syne4Q8CII8 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.19□□□□□ -2.06
Syne4Q8CII8 Gm33866-201ENSMUST00000196911 289 ntBASIC2.19□□□□□ -2.06
Syne4Q8CII8 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.19□□□□□ -2.06
Syne4Q8CII8 Gm22744-201ENSMUST00000083444 65 ntBASIC2.19□□□□□ -2.06
Syne4Q8CII8 Gm25410-201ENSMUST00000083758 137 ntBASIC2.19□□□□□ -2.06
Syne4Q8CII8 Gm26154-201ENSMUST00000102339 96 ntBASIC2.18□□□□□ -2.06
Syne4Q8CII8 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Syne4Q8CII8 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.18□□□□□ -2.06
Syne4Q8CII8 Gm22083-201ENSMUST00000157586 102 ntBASIC2.18□□□□□ -2.06
Syne4Q8CII8 Gm22768-201ENSMUST00000158366 153 ntBASIC2.18□□□□□ -2.06
Syne4Q8CII8 Gm26004-201ENSMUST00000158804 116 ntBASIC2.18□□□□□ -2.06
Syne4Q8CII8 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
Syne4Q8CII8 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.18□□□□□ -2.06
Syne4Q8CII8 Gm22259-201ENSMUST00000178926 107 ntBASIC2.18□□□□□ -2.06
Syne4Q8CII8 Gm37557-201ENSMUST00000191640 139 ntBASIC2.18□□□□□ -2.06
Syne4Q8CII8 Gm37746-201ENSMUST00000193249 198 ntBASIC2.18□□□□□ -2.06
Syne4Q8CII8 Gm9251-201ENSMUST00000197202 628 ntBASIC2.18□□□□□ -2.06
Syne4Q8CII8 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.18□□□□□ -2.06
Syne4Q8CII8 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.18□□□□□ -2.06
Syne4Q8CII8 Gm25796-201ENSMUST00000082645 163 ntBASIC2.18□□□□□ -2.06
Syne4Q8CII8 Mir301-201ENSMUST00000083655 86 ntBASIC2.18□□□□□ -2.06
Syne4Q8CII8 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Syne4Q8CII8 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.18□□□□□ -2.06
Syne4Q8CII8 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Syne4Q8CII8 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Syne4Q8CII8 Gm24595-201ENSMUST00000122501 110 ntBASIC2.17□□□□□ -2.06
Syne4Q8CII8 Gm24478-201ENSMUST00000157439 158 ntBASIC2.17□□□□□ -2.06
Syne4Q8CII8 Gm23267-201ENSMUST00000178490 132 ntBASIC2.17□□□□□ -2.06
Syne4Q8CII8 Gm25935-201ENSMUST00000178746 107 ntBASIC2.17□□□□□ -2.06
Syne4Q8CII8 Snord43-201ENSMUST00000199549 108 ntBASIC2.17□□□□□ -2.06
Syne4Q8CII8 Gm5010-201ENSMUST00000213131 260 ntBASIC2.17□□□□□ -2.06
Syne4Q8CII8 Gm24412-201ENSMUST00000083426 109 ntBASIC2.17□□□□□ -2.06
Syne4Q8CII8 Mir146-201ENSMUST00000083667 65 ntBASIC2.17□□□□□ -2.06
Syne4Q8CII8 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Syne4Q8CII8 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.17□□□□□ -2.06
Syne4Q8CII8 Gm13801-201ENSMUST00000120750 160 ntBASIC2.16□□□□□ -2.06
Syne4Q8CII8 Gm25783-201ENSMUST00000122525 190 ntBASIC2.16□□□□□ -2.06
Syne4Q8CII8 Gm23390-201ENSMUST00000157393 106 ntBASIC2.16□□□□□ -2.06
Syne4Q8CII8 Gm22554-201ENSMUST00000157798 147 ntBASIC2.16□□□□□ -2.06
Syne4Q8CII8 Gm23194-201ENSMUST00000158813 105 ntBASIC2.16□□□□□ -2.06
Syne4Q8CII8 Mir6388-201ENSMUST00000184417 75 ntBASIC2.16□□□□□ -2.06
Syne4Q8CII8 Gm27979-201ENSMUST00000185126 56 ntBASIC2.16□□□□□ -2.06
Syne4Q8CII8 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.16□□□□□ -2.06
Syne4Q8CII8 Gm45116-201ENSMUST00000207392 275 ntBASIC2.16□□□□□ -2.06
Syne4Q8CII8 Gm25634-201ENSMUST00000082667 105 ntBASIC2.16□□□□□ -2.06
Syne4Q8CII8 Gm24044-201ENSMUST00000083107 156 ntBASIC2.16□□□□□ -2.06
Syne4Q8CII8 Mir384-201ENSMUST00000083565 88 ntBASIC2.16□□□□□ -2.06
Syne4Q8CII8 Mir293-201ENSMUST00000104841 80 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 188.4 ms