Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm25895-201ENSMUST00000083714 100 ntBASIC2.49□□□□□ -2.01
Vps53Q8CCB4 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.49□□□□□ -2.01
Vps53Q8CCB4 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.48□□□□□ -2.01
Vps53Q8CCB4 Gm25377-201ENSMUST00000104334 129 ntBASIC2.48□□□□□ -2.01
Vps53Q8CCB4 Gm22553-201ENSMUST00000157797 295 ntBASIC2.48□□□□□ -2.01
Vps53Q8CCB4 Gm22093-201ENSMUST00000158980 111 ntBASIC2.48□□□□□ -2.01
Vps53Q8CCB4 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.48□□□□□ -2.01
Vps53Q8CCB4 Gm26435-201ENSMUST00000179026 107 ntBASIC2.48□□□□□ -2.01
Vps53Q8CCB4 Gm6105-201ENSMUST00000200580 624 ntBASIC2.48□□□□□ -2.01
Vps53Q8CCB4 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.48□□□□□ -2.01
Vps53Q8CCB4 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.48□□□□□ -2.01
Vps53Q8CCB4 Gm24615-201ENSMUST00000083268 113 ntBASIC2.48□□□□□ -2.01
Vps53Q8CCB4 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.48□□□□□ -2.01
Vps53Q8CCB4 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Vps53Q8CCB4 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.47□□□□□ -2.01
Vps53Q8CCB4 Gm22051-201ENSMUST00000117002 127 ntBASIC2.47□□□□□ -2.01
Vps53Q8CCB4 Gm6444-201ENSMUST00000119611 458 ntBASIC2.47□□□□□ -2.01
Vps53Q8CCB4 Gm24001-201ENSMUST00000158463 85 ntBASIC2.47□□□□□ -2.01
Vps53Q8CCB4 Gm22075-201ENSMUST00000158599 192 ntBASIC2.47□□□□□ -2.01
Vps53Q8CCB4 Mir669k-201ENSMUST00000177742 127 ntBASIC2.47□□□□□ -2.01
Vps53Q8CCB4 Gm25673-201ENSMUST00000179957 127 ntBASIC2.47□□□□□ -2.01
Vps53Q8CCB4 Gm43199-201ENSMUST00000200019 307 ntBASIC2.47□□□□□ -2.01
Vps53Q8CCB4 Gm44182-201ENSMUST00000204052 115 ntBASIC2.47□□□□□ -2.01
Vps53Q8CCB4 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.47□□□□□ -2.01
Vps53Q8CCB4 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.01
Vps53Q8CCB4 Gm23015-201ENSMUST00000104145 128 ntBASIC2.46□□□□□ -2.02
Vps53Q8CCB4 Gm23653-201ENSMUST00000116751 97 ntBASIC2.46□□□□□ -2.02
Vps53Q8CCB4 Gm25961-201ENSMUST00000157174 135 ntBASIC2.46□□□□□ -2.02
Vps53Q8CCB4 Gm24106-201ENSMUST00000175498 127 ntBASIC2.46□□□□□ -2.02
Vps53Q8CCB4 Gm28344-201ENSMUST00000185704 279 ntBASIC2.46□□□□□ -2.02
Vps53Q8CCB4 Snord80-202ENSMUST00000199023 77 ntBASIC2.46□□□□□ -2.02
Vps53Q8CCB4 Gm45456-201ENSMUST00000210841 243 ntBASIC2.46□□□□□ -2.02
Vps53Q8CCB4 AC158982.2-201ENSMUST00000226283 184 ntBASIC2.46□□□□□ -2.02
Vps53Q8CCB4 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Vps53Q8CCB4 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Vps53Q8CCB4 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.45□□□□□ -2.02
Vps53Q8CCB4 Gm23010-201ENSMUST00000104151 126 ntBASIC2.45□□□□□ -2.02
Vps53Q8CCB4 Gm22494-201ENSMUST00000104495 128 ntBASIC2.45□□□□□ -2.02
Vps53Q8CCB4 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.45□□□□□ -2.02
Vps53Q8CCB4 Gm24010-201ENSMUST00000157731 282 ntBASIC2.45□□□□□ -2.02
Vps53Q8CCB4 Gm25711-201ENSMUST00000158633 128 ntBASIC2.45□□□□□ -2.02
Vps53Q8CCB4 Gm24277-201ENSMUST00000158661 104 ntBASIC2.45□□□□□ -2.02
Vps53Q8CCB4 Gm24510-201ENSMUST00000174965 94 ntBASIC2.45□□□□□ -2.02
Vps53Q8CCB4 Gm46993-201ENSMUST00000220708 259 ntBASIC2.45□□□□□ -2.02
Vps53Q8CCB4 Gm22704-201ENSMUST00000083027 137 ntBASIC2.45□□□□□ -2.02
Vps53Q8CCB4 Gm26175-201ENSMUST00000083794 131 ntBASIC2.45□□□□□ -2.02
Vps53Q8CCB4 Gm22935-201ENSMUST00000103960 104 ntBASIC2.44□□□□□ -2.02
Vps53Q8CCB4 Gm23990-201ENSMUST00000117031 117 ntBASIC2.44□□□□□ -2.02
Vps53Q8CCB4 Gm26412-201ENSMUST00000157666 55 ntBASIC2.44□□□□□ -2.02
Vps53Q8CCB4 Gm25267-201ENSMUST00000158522 63 ntBASIC2.44□□□□□ -2.02
Vps53Q8CCB4 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.44□□□□□ -2.02
Vps53Q8CCB4 Gm27991-201ENSMUST00000184804 137 ntBASIC2.44□□□□□ -2.02
Vps53Q8CCB4 Gm6003-201ENSMUST00000187903 463 ntBASIC2.44□□□□□ -2.02
Vps53Q8CCB4 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.44□□□□□ -2.02
Vps53Q8CCB4 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.44□□□□□ -2.02
Vps53Q8CCB4 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Vps53Q8CCB4 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.43□□□□□ -2.02
Vps53Q8CCB4 Gm37579-201ENSMUST00000194291 142 ntBASIC2.43□□□□□ -2.02
Vps53Q8CCB4 Gm25636-201ENSMUST00000082666 133 ntBASIC2.43□□□□□ -2.02
Vps53Q8CCB4 Gm25813-201ENSMUST00000082748 191 ntBASIC2.43□□□□□ -2.02
Vps53Q8CCB4 Mir30d-201ENSMUST00000083503 82 ntBASIC2.43□□□□□ -2.02
Vps53Q8CCB4 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Vps53Q8CCB4 Gm14748-201ENSMUST00000119819 411 ntBASIC2.42□□□□□ -2.02
Vps53Q8CCB4 Gm25985-201ENSMUST00000122677 107 ntBASIC2.42□□□□□ -2.02
Vps53Q8CCB4 Gm25599-201ENSMUST00000157816 103 ntBASIC2.42□□□□□ -2.02
Vps53Q8CCB4 Gm23194-201ENSMUST00000158813 105 ntBASIC2.42□□□□□ -2.02
Vps53Q8CCB4 Gm24390-201ENSMUST00000179578 62 ntBASIC2.42□□□□□ -2.02
Vps53Q8CCB4 Mir7225-201ENSMUST00000184178 54 ntBASIC2.42□□□□□ -2.02
Vps53Q8CCB4 Snora69-201ENSMUST00000083708 131 ntBASIC2.42□□□□□ -2.02
Vps53Q8CCB4 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Vps53Q8CCB4 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.42□□□□□ -2.02
Vps53Q8CCB4 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Vps53Q8CCB4 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.41□□□□□ -2.02
Vps53Q8CCB4 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.41□□□□□ -2.02
Vps53Q8CCB4 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.41□□□□□ -2.02
Vps53Q8CCB4 Mir466b-1-201ENSMUST00000177988 82 ntBASIC2.41□□□□□ -2.02
Vps53Q8CCB4 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC2.41□□□□□ -2.02
Vps53Q8CCB4 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.41□□□□□ -2.02
Vps53Q8CCB4 Gm45654-201ENSMUST00000210980 123 ntBASIC2.41□□□□□ -2.02
Vps53Q8CCB4 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.41□□□□□ -2.02
Vps53Q8CCB4 AC165138.1-201ENSMUST00000226984 270 ntBASIC2.41□□□□□ -2.02
Vps53Q8CCB4 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Vps53Q8CCB4 Gm24049-201ENSMUST00000102409 100 ntBASIC2.4□□□□□ -2.03
Vps53Q8CCB4 Gm13345-201ENSMUST00000121928 228 ntBASIC2.4□□□□□ -2.03
Vps53Q8CCB4 Gm23469-201ENSMUST00000157131 104 ntBASIC2.4□□□□□ -2.03
Vps53Q8CCB4 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.4□□□□□ -2.03
Vps53Q8CCB4 AC154328.1-201ENSMUST00000225875 307 ntBASIC2.4□□□□□ -2.03
Vps53Q8CCB4 Mir29c-201ENSMUST00000083614 88 ntBASIC2.4□□□□□ -2.03
Vps53Q8CCB4 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.4□□□□□ -2.03
Vps53Q8CCB4 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
Vps53Q8CCB4 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.4□□□□□ -2.03
Vps53Q8CCB4 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm24098-201ENSMUST00000102075 109 ntBASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm25381-201ENSMUST00000102078 109 ntBASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm24276-201ENSMUST00000102181 110 ntBASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm15214-201ENSMUST00000122155 470 ntBASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm22535-201ENSMUST00000158174 119 ntBASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm23350-201ENSMUST00000158429 103 ntBASIC2.39□□□□□ -2.03
Vps53Q8CCB4 Gm25836-201ENSMUST00000158918 123 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms