Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Gm23641-201ENSMUST00000157857 101 ntBASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Mir1936-201ENSMUST00000158699 93 ntBASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Gm24862-201ENSMUST00000179103 79 ntBASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Gm23310-201ENSMUST00000179105 79 ntBASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Gm25461-201ENSMUST00000179293 79 ntBASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Gm27793-201ENSMUST00000183405 76 ntBASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Gm28343-201ENSMUST00000185386 112 ntBASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 AC157476.1-201ENSMUST00000215555 169 ntBASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Mir490-201ENSMUST00000093567 84 ntBASIC-0.21□□□□□ -2.44
Col6a6Q8C6K9 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.22□□□□□ -2.44
Col6a6Q8C6K9 Gm12143-201ENSMUST00000119666 332 ntBASIC-0.22□□□□□ -2.44
Col6a6Q8C6K9 Gm15061-201ENSMUST00000121076 1046 ntBASIC-0.22□□□□□ -2.44
Col6a6Q8C6K9 Defb44-ps-201ENSMUST00000126871 219 ntBASIC-0.22□□□□□ -2.44
Col6a6Q8C6K9 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.22□□□□□ -2.44
Col6a6Q8C6K9 Gm22290-201ENSMUST00000177655 107 ntBASIC-0.22□□□□□ -2.44
Col6a6Q8C6K9 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.22□□□□□ -2.44
Col6a6Q8C6K9 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.22□□□□□ -2.44
Col6a6Q8C6K9 AC138667.2-201ENSMUST00000224880 598 ntBASIC-0.22□□□□□ -2.44
Col6a6Q8C6K9 AC120553.1-201ENSMUST00000227313 260 ntBASIC-0.22□□□□□ -2.44
Col6a6Q8C6K9 Gm24927-201ENSMUST00000083397 107 ntBASIC-0.22□□□□□ -2.44
Col6a6Q8C6K9 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
Col6a6Q8C6K9 Gm22764-201ENSMUST00000158370 92 ntBASIC-0.22□□□□□ -2.45
Col6a6Q8C6K9 Gm17148-201ENSMUST00000164702 249 ntBASIC-0.22□□□□□ -2.45
Col6a6Q8C6K9 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC-0.22□□□□□ -2.45
Col6a6Q8C6K9 Gm28740-201ENSMUST00000186142 215 ntBASIC-0.22□□□□□ -2.45
Col6a6Q8C6K9 Gm43556-201ENSMUST00000196186 681 ntBASIC-0.22□□□□□ -2.45
Col6a6Q8C6K9 Snora75-201ENSMUST00000082903 133 ntBASIC-0.22□□□□□ -2.45
Col6a6Q8C6K9 Gm15077-201ENSMUST00000122344 362 ntBASIC-0.23□□□□□ -2.45
Col6a6Q8C6K9 Gm16358-201ENSMUST00000146046 210 ntBASIC-0.23□□□□□ -2.45
Col6a6Q8C6K9 Mir6377-201ENSMUST00000183760 114 ntBASIC-0.23□□□□□ -2.45
Col6a6Q8C6K9 Gm19777-201ENSMUST00000191940 358 ntBASIC-0.23□□□□□ -2.45
Col6a6Q8C6K9 AC164304.1-201ENSMUST00000226920 272 ntBASIC-0.23□□□□□ -2.45
Col6a6Q8C6K9 Gm26457-201ENSMUST00000082678 78 ntBASIC-0.23□□□□□ -2.45
Col6a6Q8C6K9 Gm24764-201ENSMUST00000083686 199 ntBASIC-0.23□□□□□ -2.45
Col6a6Q8C6K9 AC162910.1-201ENSMUST00000221219 1723 ntBASIC-0.23□□□□□ -2.45
Col6a6Q8C6K9 Gm23422-201ENSMUST00000102000 107 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm22236-201ENSMUST00000157093 106 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm22328-201ENSMUST00000158074 112 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm23862-201ENSMUST00000180342 94 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm24409-201ENSMUST00000157881 152 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm26228-201ENSMUST00000082512 107 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm25518-201ENSMUST00000083864 107 ntBASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
Col6a6Q8C6K9 Gm42718-201ENSMUST00000197319 2681 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm22545-201ENSMUST00000104350 132 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm16242-201ENSMUST00000117741 334 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm11859-201ENSMUST00000118099 455 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm23898-201ENSMUST00000158111 103 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Mir1933-201ENSMUST00000158930 88 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm25874-201ENSMUST00000178030 79 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm44325-201ENSMUST00000196757 77 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 AC130821.1-201ENSMUST00000221997 293 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Mir30a-201ENSMUST00000083471 71 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm14782-201ENSMUST00000120151 195 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm23169-201ENSMUST00000157157 112 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm24547-201ENSMUST00000158649 149 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm20689-201ENSMUST00000176033 279 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 CT030684.2-201ENSMUST00000228946 826 ntBASIC-0.25□□□□□ -2.45
Col6a6Q8C6K9 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.26□□□□□ -2.45
Col6a6Q8C6K9 Gm24338-201ENSMUST00000104205 127 ntBASIC-0.26□□□□□ -2.45
Col6a6Q8C6K9 Gm22597-201ENSMUST00000157602 80 ntBASIC-0.26□□□□□ -2.45
Col6a6Q8C6K9 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.26□□□□□ -2.45
Col6a6Q8C6K9 Gm44948-201ENSMUST00000209050 149 ntBASIC-0.26□□□□□ -2.45
Col6a6Q8C6K9 AC153141.1-201ENSMUST00000218636 501 ntBASIC-0.26□□□□□ -2.45
Col6a6Q8C6K9 Mir155-201ENSMUST00000083463 65 ntBASIC-0.26□□□□□ -2.45
Col6a6Q8C6K9 Mir709-201ENSMUST00000102190 88 ntBASIC-0.26□□□□□ -2.45
Col6a6Q8C6K9 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms