Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm44666-201ENSMUST00000208544 391 ntBASIC3.52□□□□□ -1.85
Trim47Q8C0E3 n-R5s183-201ENSMUST00000083939 115 ntBASIC3.52□□□□□ -1.85
Trim47Q8C0E3 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trim47Q8C0E3 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trim47Q8C0E3 Gm24171-201ENSMUST00000104126 131 ntBASIC3.51□□□□□ -1.85
Trim47Q8C0E3 Gm25308-201ENSMUST00000104171 158 ntBASIC3.51□□□□□ -1.85
Trim47Q8C0E3 Gm26415-201ENSMUST00000157673 292 ntBASIC3.51□□□□□ -1.85
Trim47Q8C0E3 Gm22163-201ENSMUST00000158408 135 ntBASIC3.51□□□□□ -1.85
Trim47Q8C0E3 Gm24813-201ENSMUST00000175310 84 ntBASIC3.51□□□□□ -1.85
Trim47Q8C0E3 Gm26061-201ENSMUST00000175584 108 ntBASIC3.51□□□□□ -1.85
Trim47Q8C0E3 Gm28002-201ENSMUST00000184832 100 ntBASIC3.51□□□□□ -1.85
Trim47Q8C0E3 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.51□□□□□ -1.85
Trim47Q8C0E3 Gm23723-201ENSMUST00000082996 132 ntBASIC3.51□□□□□ -1.85
Trim47Q8C0E3 Gm25513-201ENSMUST00000083861 162 ntBASIC3.51□□□□□ -1.85
Trim47Q8C0E3 Gm44578-201ENSMUST00000207236 3835 ntBASIC3.51□□□□□ -1.85
Trim47Q8C0E3 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Trim47Q8C0E3 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trim47Q8C0E3 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.5□□□□□ -1.85
Trim47Q8C0E3 Gm16533-201ENSMUST00000140035 228 ntBASIC3.5□□□□□ -1.85
Trim47Q8C0E3 Gm22963-201ENSMUST00000157960 91 ntBASIC3.5□□□□□ -1.85
Trim47Q8C0E3 Gm17117-201ENSMUST00000163665 299 ntBASIC3.5□□□□□ -1.85
Trim47Q8C0E3 Gm27415-201ENSMUST00000183720 95 ntBASIC3.5□□□□□ -1.85
Trim47Q8C0E3 Gm9370-201ENSMUST00000222787 609 ntBASIC3.5□□□□□ -1.85
Trim47Q8C0E3 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.5□□□□□ -1.85
Trim47Q8C0E3 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trim47Q8C0E3 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.5□□□□□ -1.85
Trim47Q8C0E3 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Trim47Q8C0E3 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Trim47Q8C0E3 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Gm24068-201ENSMUST00000104513 132 ntBASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Gm22678-201ENSMUST00000116974 101 ntBASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Gm9119-201ENSMUST00000118866 495 ntBASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Gm11356-201ENSMUST00000118974 192 ntBASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Gm15281-201ENSMUST00000125181 351 ntBASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Mir1927-201ENSMUST00000158579 109 ntBASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Gm27698-201ENSMUST00000184060 249 ntBASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Gm44464-201ENSMUST00000198010 138 ntBASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Gm42960-201ENSMUST00000202160 241 ntBASIC3.49□□□□□ -1.85
Trim47Q8C0E3 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Mir340-201ENSMUST00000083483 98 ntBASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim47Q8C0E3 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Gm26420-201ENSMUST00000104273 103 ntBASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Gm26477-201ENSMUST00000122617 323 ntBASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Gm23716-201ENSMUST00000157348 144 ntBASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Gm25933-201ENSMUST00000178943 108 ntBASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Gm27446-201ENSMUST00000183963 89 ntBASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.48□□□□□ -1.85
Trim47Q8C0E3 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Gm23056-201ENSMUST00000082803 111 ntBASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim47Q8C0E3 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim47Q8C0E3 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.47□□□□□ -1.85
Trim47Q8C0E3 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Trim47Q8C0E3 AC153950.1-201ENSMUST00000219916 3238 ntBASIC3.47□□□□□ -1.85
Trim47Q8C0E3 Mir1198-201ENSMUST00000116995 121 ntBASIC3.47□□□□□ -1.85
Trim47Q8C0E3 Gm23113-201ENSMUST00000158477 99 ntBASIC3.47□□□□□ -1.85
Trim47Q8C0E3 Gm23384-201ENSMUST00000158593 103 ntBASIC3.47□□□□□ -1.85
Trim47Q8C0E3 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim47Q8C0E3 AC158598.1-201ENSMUST00000214349 3847 ntBASIC3.47□□□□□ -1.85
Trim47Q8C0E3 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Trim47Q8C0E3 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Trim47Q8C0E3 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Trim47Q8C0E3 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trim47Q8C0E3 Gm14448-201ENSMUST00000116383 210 ntBASIC3.46□□□□□ -1.86
Trim47Q8C0E3 Gm22221-201ENSMUST00000157362 103 ntBASIC3.46□□□□□ -1.86
Trim47Q8C0E3 AC166341.8-201ENSMUST00000221267 108 ntBASIC3.46□□□□□ -1.86
Trim47Q8C0E3 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.46□□□□□ -1.86
Trim47Q8C0E3 Gm24524-201ENSMUST00000082925 170 ntBASIC3.46□□□□□ -1.86
Trim47Q8C0E3 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim47Q8C0E3 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trim47Q8C0E3 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trim47Q8C0E3 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trim47Q8C0E3 Gm25769-201ENSMUST00000158569 127 ntBASIC3.45□□□□□ -1.86
Trim47Q8C0E3 Gm23369-201ENSMUST00000175406 105 ntBASIC3.45□□□□□ -1.86
Trim47Q8C0E3 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.45□□□□□ -1.86
Trim47Q8C0E3 Mir6377-201ENSMUST00000183760 114 ntBASIC3.45□□□□□ -1.86
Trim47Q8C0E3 Gm28358-202ENSMUST00000189292 223 ntBASIC3.45□□□□□ -1.86
Trim47Q8C0E3 Gm9156-201ENSMUST00000189660 463 ntBASIC3.45□□□□□ -1.86
Trim47Q8C0E3 Gm44459-201ENSMUST00000203926 160 ntBASIC3.45□□□□□ -1.86
Trim47Q8C0E3 Gm23040-201ENSMUST00000083869 163 ntBASIC3.45□□□□□ -1.86
Trim47Q8C0E3 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trim47Q8C0E3 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trim47Q8C0E3 Gm14917-201ENSMUST00000118872 2105 ntBASIC3.44□□□□□ -1.86
Trim47Q8C0E3 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 165 ms