Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim35Q8C006 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim35Q8C006 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim35Q8C006 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim35Q8C006 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim35Q8C006 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim35Q8C006 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim35Q8C006 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Trim35Q8C006 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim35Q8C006 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim35Q8C006 AC122828.3-201ENSMUST00000223019 3915 ntBASIC4.18□□□□□ -1.74
Trim35Q8C006 Gm25728-201ENSMUST00000104525 159 ntBASIC4.18□□□□□ -1.74
Trim35Q8C006 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.18□□□□□ -1.74
Trim35Q8C006 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim35Q8C006 Gm25241-201ENSMUST00000174909 84 ntBASIC4.18□□□□□ -1.74
Trim35Q8C006 Gm26217-201ENSMUST00000175212 84 ntBASIC4.18□□□□□ -1.74
Trim35Q8C006 Gm24218-201ENSMUST00000180163 105 ntBASIC4.18□□□□□ -1.74
Trim35Q8C006 Mir6402-201ENSMUST00000183406 80 ntBASIC4.18□□□□□ -1.74
Trim35Q8C006 Mir6414-201ENSMUST00000183685 82 ntBASIC4.18□□□□□ -1.74
Trim35Q8C006 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.18□□□□□ -1.74
Trim35Q8C006 Gm43889-201ENSMUST00000203950 3681 ntBASIC4.18□□□□□ -1.74
Trim35Q8C006 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Trim35Q8C006 Gm19194-201ENSMUST00000192015 3774 ntBASIC4.17□□□□□ -1.74
Trim35Q8C006 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim35Q8C006 Gm26339-201ENSMUST00000102368 99 ntBASIC4.17□□□□□ -1.74
Trim35Q8C006 Gm22493-201ENSMUST00000104494 132 ntBASIC4.17□□□□□ -1.74
Trim35Q8C006 Gm8200-201ENSMUST00000122390 222 ntBASIC4.17□□□□□ -1.74
Trim35Q8C006 Gm22888-201ENSMUST00000158640 77 ntBASIC4.17□□□□□ -1.74
Trim35Q8C006 Gm27834-201ENSMUST00000183427 125 ntBASIC4.17□□□□□ -1.74
Trim35Q8C006 Mir6537-201ENSMUST00000184150 110 ntBASIC4.17□□□□□ -1.74
Trim35Q8C006 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.17□□□□□ -1.74
Trim35Q8C006 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.17□□□□□ -1.74
Trim35Q8C006 Mir451a-201ENSMUST00000093557 72 ntBASIC4.17□□□□□ -1.74
Trim35Q8C006 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim35Q8C006 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim35Q8C006 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
Trim35Q8C006 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim35Q8C006 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim35Q8C006 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Trim35Q8C006 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim35Q8C006 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trim35Q8C006 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim35Q8C006 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim35Q8C006 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim35Q8C006 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trim35Q8C006 Mir20b-201ENSMUST00000102087 80 ntBASIC4.16□□□□□ -1.74
Trim35Q8C006 Gm23273-201ENSMUST00000104058 135 ntBASIC4.16□□□□□ -1.74
Trim35Q8C006 Gm24788-201ENSMUST00000104283 156 ntBASIC4.16□□□□□ -1.74
Trim35Q8C006 Gm25965-201ENSMUST00000157170 93 ntBASIC4.16□□□□□ -1.74
Trim35Q8C006 Gm22554-201ENSMUST00000157798 147 ntBASIC4.16□□□□□ -1.74
Trim35Q8C006 Gm25648-201ENSMUST00000177844 79 ntBASIC4.16□□□□□ -1.74
Trim35Q8C006 Gm25198-201ENSMUST00000178574 110 ntBASIC4.16□□□□□ -1.74
Trim35Q8C006 Mir6379-201ENSMUST00000183392 115 ntBASIC4.16□□□□□ -1.74
Trim35Q8C006 Mir3620-201ENSMUST00000184710 61 ntBASIC4.16□□□□□ -1.74
Trim35Q8C006 Gm27899-201ENSMUST00000184715 64 ntBASIC4.16□□□□□ -1.74
Trim35Q8C006 Mir6975-201ENSMUST00000184879 61 ntBASIC4.16□□□□□ -1.74
Trim35Q8C006 Mir6933-201ENSMUST00000184982 81 ntBASIC4.16□□□□□ -1.74
Trim35Q8C006 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trim35Q8C006 Gm24406-201ENSMUST00000083026 128 ntBASIC4.16□□□□□ -1.74
Trim35Q8C006 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim35Q8C006 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Trim35Q8C006 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Trim35Q8C006 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
Trim35Q8C006 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trim35Q8C006 Gm23481-201ENSMUST00000104173 131 ntBASIC4.15□□□□□ -1.75
Trim35Q8C006 Gm23322-201ENSMUST00000104464 167 ntBASIC4.15□□□□□ -1.75
Trim35Q8C006 Gm26133-201ENSMUST00000157363 100 ntBASIC4.15□□□□□ -1.75
Trim35Q8C006 Gm23905-201ENSMUST00000157568 109 ntBASIC4.15□□□□□ -1.75
Trim35Q8C006 Gm22789-201ENSMUST00000157884 130 ntBASIC4.15□□□□□ -1.75
Trim35Q8C006 Gm25456-201ENSMUST00000157952 109 ntBASIC4.15□□□□□ -1.75
Trim35Q8C006 Gm25371-201ENSMUST00000158162 101 ntBASIC4.15□□□□□ -1.75
Trim35Q8C006 Gm43540-201ENSMUST00000196320 3848 ntBASIC4.15□□□□□ -1.75
Trim35Q8C006 Gm22743-201ENSMUST00000083445 133 ntBASIC4.15□□□□□ -1.75
Trim35Q8C006 Mir490-201ENSMUST00000093567 84 ntBASIC4.15□□□□□ -1.75
Trim35Q8C006 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trim35Q8C006 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim35Q8C006 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trim35Q8C006 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Trim35Q8C006 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim35Q8C006 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim35Q8C006 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim35Q8C006 Gm43473-201ENSMUST00000200442 5997 ntBASIC4.14□□□□□ -1.75
Trim35Q8C006 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim35Q8C006 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim35Q8C006 Gm25908-201ENSMUST00000157624 98 ntBASIC4.14□□□□□ -1.75
Trim35Q8C006 Gm26290-201ENSMUST00000158891 145 ntBASIC4.14□□□□□ -1.75
Trim35Q8C006 Snora24-201ENSMUST00000174989 130 ntBASIC4.14□□□□□ -1.75
Trim35Q8C006 Gm22474-201ENSMUST00000179407 107 ntBASIC4.14□□□□□ -1.75
Trim35Q8C006 Gm44521-201ENSMUST00000206469 217 ntBASIC4.14□□□□□ -1.75
Trim35Q8C006 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Trim35Q8C006 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Trim35Q8C006 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim35Q8C006 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim35Q8C006 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Trim35Q8C006 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim35Q8C006 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim35Q8C006 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim35Q8C006 Gm26187-201ENSMUST00000157693 101 ntBASIC4.13□□□□□ -1.75
Trim35Q8C006 Gm23854-201ENSMUST00000158378 108 ntBASIC4.13□□□□□ -1.75
Trim35Q8C006 Gm25999-201ENSMUST00000175398 133 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms