Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.38□□□□□ -2.47
Col16a1Q8BLX7 Gm43993-201ENSMUST00000203972 247 ntBASIC-0.38□□□□□ -2.47
Col16a1Q8BLX7 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.39□□□□□ -2.47
Col16a1Q8BLX7 Gm13475-201ENSMUST00000119290 234 ntBASIC-0.39□□□□□ -2.47
Col16a1Q8BLX7 Gm14765-201ENSMUST00000121954 326 ntBASIC-0.39□□□□□ -2.47
Col16a1Q8BLX7 Gm24015-201ENSMUST00000157725 232 ntBASIC-0.39□□□□□ -2.47
Col16a1Q8BLX7 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.39□□□□□ -2.47
Col16a1Q8BLX7 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
Col16a1Q8BLX7 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC-0.39□□□□□ -2.47
Col16a1Q8BLX7 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.39□□□□□ -2.47
Col16a1Q8BLX7 Gm36984-201ENSMUST00000192770 235 ntBASIC-0.39□□□□□ -2.47
Col16a1Q8BLX7 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.39□□□□□ -2.47
Col16a1Q8BLX7 Gm14296-202ENSMUST00000108931 750 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Gm16032-201ENSMUST00000118534 168 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Gm24141-201ENSMUST00000122776 115 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Gm28414-201ENSMUST00000190111 294 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Trdv3-201ENSMUST00000198551 309 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Gm22831-201ENSMUST00000102473 109 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Gm26143-201ENSMUST00000104480 108 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Gm22654-201ENSMUST00000157874 105 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Gm24862-201ENSMUST00000179103 79 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Gm23310-201ENSMUST00000179105 79 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Gm25461-201ENSMUST00000179293 79 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Mir327-201ENSMUST00000199328 69 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 AC138667.2-201ENSMUST00000224880 598 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.4□□□□□ -2.47
Col16a1Q8BLX7 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.41□□□□□ -2.48
Col16a1Q8BLX7 Mir1966-201ENSMUST00000158807 108 ntBASIC-0.41□□□□□ -2.48
Col16a1Q8BLX7 Gm24084-201ENSMUST00000175173 137 ntBASIC-0.41□□□□□ -2.48
Col16a1Q8BLX7 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.41□□□□□ -2.48
Col16a1Q8BLX7 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.41□□□□□ -2.48
Col16a1Q8BLX7 Gm28439-201ENSMUST00000187714 876 ntBASIC-0.41□□□□□ -2.48
Col16a1Q8BLX7 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.41□□□□□ -2.48
Col16a1Q8BLX7 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.41□□□□□ -2.48
Col16a1Q8BLX7 Gm44954-201ENSMUST00000208513 227 ntBASIC-0.41□□□□□ -2.48
Col16a1Q8BLX7 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.41□□□□□ -2.48
Col16a1Q8BLX7 Gm11856-201ENSMUST00000118712 276 ntBASIC-0.42□□□□□ -2.48
Col16a1Q8BLX7 Gm14638-201ENSMUST00000121338 216 ntBASIC-0.42□□□□□ -2.48
Col16a1Q8BLX7 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-0.42□□□□□ -2.48
Col16a1Q8BLX7 Gm22281-201ENSMUST00000157198 103 ntBASIC-0.42□□□□□ -2.48
Col16a1Q8BLX7 Scarna3a-201ENSMUST00000158911 140 ntBASIC-0.42□□□□□ -2.48
Col16a1Q8BLX7 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.42□□□□□ -2.48
Col16a1Q8BLX7 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.42□□□□□ -2.48
Col16a1Q8BLX7 Gm29640-201ENSMUST00000187972 278 ntBASIC-0.42□□□□□ -2.48
Col16a1Q8BLX7 Gm24338-201ENSMUST00000104205 127 ntBASIC-0.43□□□□□ -2.48
Col16a1Q8BLX7 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC-0.43□□□□□ -2.48
Col16a1Q8BLX7 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC-0.43□□□□□ -2.48
Col16a1Q8BLX7 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.43□□□□□ -2.48
Col16a1Q8BLX7 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.43□□□□□ -2.48
Col16a1Q8BLX7 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.43□□□□□ -2.48
Col16a1Q8BLX7 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
Col16a1Q8BLX7 AC157476.1-201ENSMUST00000215555 169 ntBASIC-0.43□□□□□ -2.48
Col16a1Q8BLX7 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.43□□□□□ -2.48
Col16a1Q8BLX7 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.44□□□□□ -2.48
Col16a1Q8BLX7 Snord89-201ENSMUST00000104516 110 ntBASIC-0.44□□□□□ -2.48
Col16a1Q8BLX7 Gm23996-201ENSMUST00000158062 131 ntBASIC-0.44□□□□□ -2.48
Col16a1Q8BLX7 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.44□□□□□ -2.48
Col16a1Q8BLX7 Gm35212-201ENSMUST00000196672 606 ntBASIC-0.44□□□□□ -2.48
Col16a1Q8BLX7 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.44□□□□□ -2.48
Col16a1Q8BLX7 Gm25582-201ENSMUST00000083412 110 ntBASIC-0.44□□□□□ -2.48
Col16a1Q8BLX7 Gm24277-201ENSMUST00000158661 104 ntBASIC-0.45□□□□□ -2.48
Col16a1Q8BLX7 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.45□□□□□ -2.48
Col16a1Q8BLX7 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC-0.45□□□□□ -2.48
Col16a1Q8BLX7 Gm25513-201ENSMUST00000083861 162 ntBASIC-0.45□□□□□ -2.48
Col16a1Q8BLX7 Gm13729-201ENSMUST00000120328 406 ntBASIC-0.45□□□□□ -2.48
Col16a1Q8BLX7 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.45□□□□□ -2.48
Col16a1Q8BLX7 Gm22200-201ENSMUST00000158614 67 ntBASIC-0.45□□□□□ -2.48
Col16a1Q8BLX7 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.45□□□□□ -2.48
Col16a1Q8BLX7 Gm29014-201ENSMUST00000191422 326 ntBASIC-0.45□□□□□ -2.48
Col16a1Q8BLX7 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC-0.45□□□□□ -2.48
Col16a1Q8BLX7 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.45□□□□□ -2.48
Col16a1Q8BLX7 Gm24172-201ENSMUST00000104127 117 ntBASIC-0.46□□□□□ -2.48
Col16a1Q8BLX7 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.46□□□□□ -2.48
Col16a1Q8BLX7 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
Col16a1Q8BLX7 Gm20689-201ENSMUST00000176033 279 ntBASIC-0.46□□□□□ -2.48
Col16a1Q8BLX7 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.46□□□□□ -2.48
Col16a1Q8BLX7 Gm36953-201ENSMUST00000195295 268 ntBASIC-0.46□□□□□ -2.48
Col16a1Q8BLX7 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC-0.46□□□□□ -2.48
Col16a1Q8BLX7 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.46□□□□□ -2.48
Col16a1Q8BLX7 Mir490-201ENSMUST00000093567 84 ntBASIC-0.46□□□□□ -2.48
Col16a1Q8BLX7 Gm23516-201ENSMUST00000093728 107 ntBASIC-0.46□□□□□ -2.48
Col16a1Q8BLX7 Gm10780-201ENSMUST00000099459 285 ntBASIC-0.46□□□□□ -2.48
Col16a1Q8BLX7 Mir654-201ENSMUST00000104787 84 ntBASIC-0.47□□□□□ -2.48
Col16a1Q8BLX7 Gm24910-201ENSMUST00000157289 272 ntBASIC-0.47□□□□□ -2.48
Col16a1Q8BLX7 Mir1933-201ENSMUST00000158930 88 ntBASIC-0.47□□□□□ -2.48
Col16a1Q8BLX7 Gm20391-201ENSMUST00000174722 106 ntBASIC-0.47□□□□□ -2.48
Col16a1Q8BLX7 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.47□□□□□ -2.48
Col16a1Q8BLX7 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.47□□□□□ -2.48
Col16a1Q8BLX7 Gm45232-201ENSMUST00000207811 162 ntBASIC-0.47□□□□□ -2.48
Col16a1Q8BLX7 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.47□□□□□ -2.48
Col16a1Q8BLX7 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
Col16a1Q8BLX7 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.48□□□□□ -2.49
Col16a1Q8BLX7 Gm24584-201ENSMUST00000157972 107 ntBASIC-0.48□□□□□ -2.49
Col16a1Q8BLX7 Gm25211-201ENSMUST00000177553 107 ntBASIC-0.48□□□□□ -2.49
Col16a1Q8BLX7 Gm25101-201ENSMUST00000179057 107 ntBASIC-0.48□□□□□ -2.49
Col16a1Q8BLX7 Gm25173-201ENSMUST00000179794 107 ntBASIC-0.48□□□□□ -2.49
Col16a1Q8BLX7 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC-0.48□□□□□ -2.49
Col16a1Q8BLX7 Gm26054-201ENSMUST00000083037 107 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms