Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Shkbp1Q6P7W2 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Gm15067-201ENSMUST00000119534 156 ntBASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Gm11414-201ENSMUST00000121795 263 ntBASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Gm25060-201ENSMUST00000157374 130 ntBASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Gm24212-201ENSMUST00000158258 132 ntBASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Gm26406-201ENSMUST00000158503 124 ntBASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Gm3852-201ENSMUST00000182781 264 ntBASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Mir6386-201ENSMUST00000183558 104 ntBASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Gm21064-202ENSMUST00000190583 278 ntBASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Gm6801-201ENSMUST00000190697 339 ntBASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Mir7657-201ENSMUST00000196051 57 ntBASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.56□□□□□ -2
Shkbp1Q6P7W2 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.56□□□□□ -2
Shkbp1Q6P7W2 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Mir340-201ENSMUST00000083483 98 ntBASIC2.56□□□□□ -2
Shkbp1Q6P7W2 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Gm22213-201ENSMUST00000157564 119 ntBASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Gm24771-201ENSMUST00000158508 137 ntBASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Gm27934-201ENSMUST00000158795 63 ntBASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Gm44477-201ENSMUST00000199661 110 ntBASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Gm43898-201ENSMUST00000204456 424 ntBASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Shkbp1Q6P7W2 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Gm25409-201ENSMUST00000083764 131 ntBASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Shkbp1Q6P7W2 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Shkbp1Q6P7W2 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Mir878-201ENSMUST00000104680 78 ntBASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Gm23551-201ENSMUST00000116852 121 ntBASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Gm22416-201ENSMUST00000158590 88 ntBASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Gm25119-201ENSMUST00000158815 88 ntBASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Gm23504-201ENSMUST00000158988 95 ntBASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Gm20613-201ENSMUST00000175828 345 ntBASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Gm19257-201ENSMUST00000186121 183 ntBASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Mir497-201ENSMUST00000200557 84 ntBASIC2.54□□□□□ -2
Shkbp1Q6P7W2 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Gm23445-201ENSMUST00000082800 107 ntBASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Shkbp1Q6P7W2 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Shkbp1Q6P7W2 Gm11356-201ENSMUST00000118974 192 ntBASIC2.53□□□□□ -2
Shkbp1Q6P7W2 Gm7209-201ENSMUST00000122339 333 ntBASIC2.53□□□□□ -2
Shkbp1Q6P7W2 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.53□□□□□ -2
Shkbp1Q6P7W2 Gm28912-201ENSMUST00000189001 234 ntBASIC2.53□□□□□ -2
Shkbp1Q6P7W2 Gm44326-201ENSMUST00000198226 101 ntBASIC2.53□□□□□ -2
Shkbp1Q6P7W2 Gm44024-201ENSMUST00000203008 476 ntBASIC2.53□□□□□ -2
Shkbp1Q6P7W2 Gm43901-201ENSMUST00000203247 453 ntBASIC2.53□□□□□ -2
Shkbp1Q6P7W2 Gm44976-201ENSMUST00000205543 261 ntBASIC2.53□□□□□ -2
Shkbp1Q6P7W2 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.53□□□□□ -2
Shkbp1Q6P7W2 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.53□□□□□ -2
Shkbp1Q6P7W2 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.53□□□□□ -2
Shkbp1Q6P7W2 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 Snord64-201ENSMUST00000104003 67 ntBASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 Gm13862-201ENSMUST00000121220 197 ntBASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 Gm23324-201ENSMUST00000157421 131 ntBASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 Gm25444-201ENSMUST00000158999 113 ntBASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 Gm25933-201ENSMUST00000178943 108 ntBASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 Gm26435-201ENSMUST00000179026 107 ntBASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 Gm42844-201ENSMUST00000200355 112 ntBASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 Gm19563-201ENSMUST00000222031 270 ntBASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 Gm25130-201ENSMUST00000082650 156 ntBASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 Mir201-201ENSMUST00000083470 66 ntBASIC2.52□□□□□ -2.01
Shkbp1Q6P7W2 Gm22935-201ENSMUST00000103960 104 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm25377-201ENSMUST00000104334 129 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm12513-201ENSMUST00000118617 352 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm12086-201ENSMUST00000120863 228 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm24634-201ENSMUST00000158672 107 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm25380-201ENSMUST00000175463 107 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm24641-201ENSMUST00000178055 107 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm25484-201ENSMUST00000178217 107 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm26138-201ENSMUST00000179236 107 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm22821-201ENSMUST00000179288 107 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm44476-201ENSMUST00000196225 91 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm23140-201ENSMUST00000082487 107 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm23298-201ENSMUST00000083181 107 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm24614-201ENSMUST00000083269 107 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm22057-201ENSMUST00000083387 107 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm25006-201ENSMUST00000083813 107 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm25516-201ENSMUST00000083857 107 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Mir466-201ENSMUST00000093591 73 ntBASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Shkbp1Q6P7W2 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Shkbp1Q6P7W2 Gm26011-201ENSMUST00000104410 104 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 140.6 ms