Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Gm25321-201ENSMUST00000122558 102 ntBASIC2.9□□□□□ -1.95
Best3Q6H1V1 Gm25599-201ENSMUST00000157816 103 ntBASIC2.9□□□□□ -1.95
Best3Q6H1V1 Gm24851-201ENSMUST00000158028 103 ntBASIC2.9□□□□□ -1.95
Best3Q6H1V1 Gm26406-201ENSMUST00000158503 124 ntBASIC2.9□□□□□ -1.95
Best3Q6H1V1 Gm43587-201ENSMUST00000199590 204 ntBASIC2.9□□□□□ -1.95
Best3Q6H1V1 Gm44057-201ENSMUST00000204547 96 ntBASIC2.9□□□□□ -1.95
Best3Q6H1V1 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.9□□□□□ -1.95
Best3Q6H1V1 Mir300-201ENSMUST00000083485 79 ntBASIC2.9□□□□□ -1.95
Best3Q6H1V1 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Best3Q6H1V1 Gm23578-201ENSMUST00000103943 104 ntBASIC2.89□□□□□ -1.95
Best3Q6H1V1 Gm24333-201ENSMUST00000175101 84 ntBASIC2.89□□□□□ -1.95
Best3Q6H1V1 Mir466b-1-201ENSMUST00000177988 82 ntBASIC2.89□□□□□ -1.95
Best3Q6H1V1 Gm29308-201ENSMUST00000188863 315 ntBASIC2.89□□□□□ -1.95
Best3Q6H1V1 AC165138.1-201ENSMUST00000226984 270 ntBASIC2.89□□□□□ -1.95
Best3Q6H1V1 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Best3Q6H1V1 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
Best3Q6H1V1 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Best3Q6H1V1 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.88□□□□□ -1.95
Best3Q6H1V1 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Best3Q6H1V1 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Best3Q6H1V1 Gm25094-201ENSMUST00000103992 131 ntBASIC2.88□□□□□ -1.95
Best3Q6H1V1 Gm22148-201ENSMUST00000104445 107 ntBASIC2.88□□□□□ -1.95
Best3Q6H1V1 Gm22606-201ENSMUST00000158290 103 ntBASIC2.88□□□□□ -1.95
Best3Q6H1V1 Gm22348-201ENSMUST00000178674 79 ntBASIC2.88□□□□□ -1.95
Best3Q6H1V1 Gm27330-201ENSMUST00000184689 132 ntBASIC2.88□□□□□ -1.95
Best3Q6H1V1 Gm24038-201ENSMUST00000082872 159 ntBASIC2.88□□□□□ -1.95
Best3Q6H1V1 Gm23990-201ENSMUST00000117031 117 ntBASIC2.87□□□□□ -1.95
Best3Q6H1V1 Gm16171-201ENSMUST00000118004 324 ntBASIC2.87□□□□□ -1.95
Best3Q6H1V1 Gm24937-201ENSMUST00000122597 134 ntBASIC2.87□□□□□ -1.95
Best3Q6H1V1 Gm25470-201ENSMUST00000175576 111 ntBASIC2.87□□□□□ -1.95
Best3Q6H1V1 Gm37693-201ENSMUST00000194562 234 ntBASIC2.87□□□□□ -1.95
Best3Q6H1V1 Mir497-201ENSMUST00000200557 84 ntBASIC2.87□□□□□ -1.95
Best3Q6H1V1 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Best3Q6H1V1 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Best3Q6H1V1 Gm23951-201ENSMUST00000104029 132 ntBASIC2.86□□□□□ -1.95
Best3Q6H1V1 Gm13922-201ENSMUST00000119505 156 ntBASIC2.86□□□□□ -1.95
Best3Q6H1V1 Gm23048-201ENSMUST00000157237 129 ntBASIC2.86□□□□□ -1.95
Best3Q6H1V1 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.86□□□□□ -1.95
Best3Q6H1V1 Gm44326-201ENSMUST00000198226 101 ntBASIC2.86□□□□□ -1.95
Best3Q6H1V1 Snord43-201ENSMUST00000199549 108 ntBASIC2.86□□□□□ -1.95
Best3Q6H1V1 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Best3Q6H1V1 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Best3Q6H1V1 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.85□□□□□ -1.95
Best3Q6H1V1 Gm23011-201ENSMUST00000104148 132 ntBASIC2.85□□□□□ -1.95
Best3Q6H1V1 Gm12941-201ENSMUST00000117934 220 ntBASIC2.85□□□□□ -1.95
Best3Q6H1V1 Gm14536-201ENSMUST00000118324 138 ntBASIC2.85□□□□□ -1.95
Best3Q6H1V1 Gm15027-201ENSMUST00000120922 138 ntBASIC2.85□□□□□ -1.95
Best3Q6H1V1 Gm22517-201ENSMUST00000158265 136 ntBASIC2.85□□□□□ -1.95
Best3Q6H1V1 Gm23005-201ENSMUST00000158950 136 ntBASIC2.85□□□□□ -1.95
Best3Q6H1V1 Gm25464-201ENSMUST00000175481 107 ntBASIC2.85□□□□□ -1.95
Best3Q6H1V1 Mir6388-201ENSMUST00000184417 75 ntBASIC2.85□□□□□ -1.95
Best3Q6H1V1 Gm19257-201ENSMUST00000186121 183 ntBASIC2.85□□□□□ -1.95
Best3Q6H1V1 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.85□□□□□ -1.95
Best3Q6H1V1 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Best3Q6H1V1 Gm14652-201ENSMUST00000118479 235 ntBASIC2.84□□□□□ -1.95
Best3Q6H1V1 Gm26160-201ENSMUST00000158965 63 ntBASIC2.84□□□□□ -1.95
Best3Q6H1V1 Gm22264-201ENSMUST00000178200 107 ntBASIC2.84□□□□□ -1.95
Best3Q6H1V1 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.84□□□□□ -1.95
Best3Q6H1V1 Gm21064-202ENSMUST00000190583 278 ntBASIC2.84□□□□□ -1.95
Best3Q6H1V1 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.84□□□□□ -1.95
Best3Q6H1V1 Gm22704-201ENSMUST00000083027 137 ntBASIC2.84□□□□□ -1.95
Best3Q6H1V1 Mir322-201ENSMUST00000083484 95 ntBASIC2.84□□□□□ -1.95
Best3Q6H1V1 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
Best3Q6H1V1 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.83□□□□□ -1.96
Best3Q6H1V1 Gm22099-201ENSMUST00000157925 123 ntBASIC2.83□□□□□ -1.96
Best3Q6H1V1 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Best3Q6H1V1 Gm8031-201ENSMUST00000213430 626 ntBASIC2.83□□□□□ -1.96
Best3Q6H1V1 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2.83□□□□□ -1.96
Best3Q6H1V1 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.83□□□□□ -1.96
Best3Q6H1V1 AC154282.1-201ENSMUST00000223154 265 ntBASIC2.83□□□□□ -1.96
Best3Q6H1V1 Mir93-201ENSMUST00000083593 88 ntBASIC2.83□□□□□ -1.96
Best3Q6H1V1 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Best3Q6H1V1 Gm21940-201ENSMUST00000204940 2278 ntBASIC2.82□□□□□ -1.96
Best3Q6H1V1 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.82□□□□□ -1.96
Best3Q6H1V1 Gm22557-201ENSMUST00000157804 102 ntBASIC2.82□□□□□ -1.96
Best3Q6H1V1 Gm24001-201ENSMUST00000158463 85 ntBASIC2.82□□□□□ -1.96
Best3Q6H1V1 Gm26097-201ENSMUST00000179642 93 ntBASIC2.82□□□□□ -1.96
Best3Q6H1V1 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Best3Q6H1V1 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Best3Q6H1V1 Gm22279-201ENSMUST00000157200 93 ntBASIC2.81□□□□□ -1.96
Best3Q6H1V1 Gm23548-201ENSMUST00000158963 106 ntBASIC2.81□□□□□ -1.96
Best3Q6H1V1 Mir6406-201ENSMUST00000183592 120 ntBASIC2.81□□□□□ -1.96
Best3Q6H1V1 Gm44922-201ENSMUST00000206690 90 ntBASIC2.81□□□□□ -1.96
Best3Q6H1V1 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC2.81□□□□□ -1.96
Best3Q6H1V1 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.81□□□□□ -1.96
Best3Q6H1V1 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Best3Q6H1V1 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.8□□□□□ -1.96
Best3Q6H1V1 Gm22416-201ENSMUST00000158590 88 ntBASIC2.8□□□□□ -1.96
Best3Q6H1V1 Gm25119-201ENSMUST00000158815 88 ntBASIC2.8□□□□□ -1.96
Best3Q6H1V1 Mir7009-201ENSMUST00000184519 64 ntBASIC2.8□□□□□ -1.96
Best3Q6H1V1 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.8□□□□□ -1.96
Best3Q6H1V1 Gm38364-201ENSMUST00000191814 179 ntBASIC2.8□□□□□ -1.96
Best3Q6H1V1 Gm19855-201ENSMUST00000210145 249 ntBASIC2.8□□□□□ -1.96
Best3Q6H1V1 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.8□□□□□ -1.96
Best3Q6H1V1 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Best3Q6H1V1 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.8□□□□□ -1.96
Best3Q6H1V1 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.79□□□□□ -1.96
Best3Q6H1V1 Gm23950-201ENSMUST00000104026 129 ntBASIC2.79□□□□□ -1.96
Best3Q6H1V1 Gm26293-201ENSMUST00000104170 84 ntBASIC2.79□□□□□ -1.96
Best3Q6H1V1 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 137.8 ms