Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Trav3-3Q5R1C3 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.57□□□□□ -2.32
Trav3-3Q5R1C3 Gm24747-201ENSMUST00000157835 87 ntBASIC0.57□□□□□ -2.32
Trav3-3Q5R1C3 Gm23996-201ENSMUST00000158062 131 ntBASIC0.57□□□□□ -2.32
Trav3-3Q5R1C3 Gm22945-201ENSMUST00000158557 157 ntBASIC0.57□□□□□ -2.32
Trav3-3Q5R1C3 Gm25450-201ENSMUST00000179144 107 ntBASIC0.57□□□□□ -2.32
Trav3-3Q5R1C3 Gm44387-201ENSMUST00000196298 145 ntBASIC0.57□□□□□ -2.32
Trav3-3Q5R1C3 Gm43624-201ENSMUST00000197368 180 ntBASIC0.57□□□□□ -2.32
Trav3-3Q5R1C3 Gm43472-201ENSMUST00000200175 154 ntBASIC0.57□□□□□ -2.32
Trav3-3Q5R1C3 Gm25078-201ENSMUST00000082530 107 ntBASIC0.57□□□□□ -2.32
Trav3-3Q5R1C3 Mir33-201ENSMUST00000083531 69 ntBASIC0.57□□□□□ -2.32
Trav3-3Q5R1C3 Mir34a-201ENSMUST00000083559 102 ntBASIC0.57□□□□□ -2.32
Trav3-3Q5R1C3 Gm23011-201ENSMUST00000104148 132 ntBASIC0.56□□□□□ -2.32
Trav3-3Q5R1C3 Gm14574-201ENSMUST00000120644 279 ntBASIC0.56□□□□□ -2.32
Trav3-3Q5R1C3 Gm25783-201ENSMUST00000122525 190 ntBASIC0.56□□□□□ -2.32
Trav3-3Q5R1C3 Gm23329-201ENSMUST00000157415 108 ntBASIC0.56□□□□□ -2.32
Trav3-3Q5R1C3 Mir1951-201ENSMUST00000157981 89 ntBASIC0.56□□□□□ -2.32
Trav3-3Q5R1C3 Gm26022-201ENSMUST00000158663 108 ntBASIC0.56□□□□□ -2.32
Trav3-3Q5R1C3 Gm27587-201ENSMUST00000185116 163 ntBASIC0.56□□□□□ -2.32
Trav3-3Q5R1C3 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.56□□□□□ -2.32
Trav3-3Q5R1C3 Gm23735-201ENSMUST00000082551 134 ntBASIC0.56□□□□□ -2.32
Trav3-3Q5R1C3 Mir362-201ENSMUST00000093592 65 ntBASIC0.56□□□□□ -2.32
Trav3-3Q5R1C3 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Gm11572-201ENSMUST00000119164 120 ntBASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Gm22883-201ENSMUST00000157376 106 ntBASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Mir6364-201ENSMUST00000183396 86 ntBASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Gm26107-201ENSMUST00000083972 107 ntBASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.55□□□□□ -2.32
Trav3-3Q5R1C3 Gm14536-201ENSMUST00000118324 138 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm3788-201ENSMUST00000119949 136 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm15027-201ENSMUST00000120922 138 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm23230-201ENSMUST00000157298 133 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm22228-201ENSMUST00000157364 101 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm24154-201ENSMUST00000175261 130 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Mir15a-201ENSMUST00000175266 84 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm25671-201ENSMUST00000178612 105 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm23307-201ENSMUST00000179167 105 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm25286-201ENSMUST00000179790 105 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm27326-201ENSMUST00000183504 95 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm27365-201ENSMUST00000184041 177 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Mir7062-201ENSMUST00000185038 66 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm38050-201ENSMUST00000191904 238 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm43238-201ENSMUST00000196463 359 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm42622-201ENSMUST00000197229 355 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm46993-201ENSMUST00000220708 259 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Mir27b-201ENSMUST00000083541 73 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Mir216a-201ENSMUST00000083605 72 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Snord33-201ENSMUST00000083694 84 ntBASIC0.54□□□□□ -2.32
Trav3-3Q5R1C3 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 Gm22598-201ENSMUST00000157600 127 ntBASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 Gm24504-201ENSMUST00000157679 100 ntBASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 Gm24942-201ENSMUST00000158328 114 ntBASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 Gm23182-201ENSMUST00000158688 135 ntBASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 Mir7665-201ENSMUST00000184907 63 ntBASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 Gm28489-201ENSMUST00000186655 316 ntBASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 Gm36946-201ENSMUST00000192706 435 ntBASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 Gm22248-201ENSMUST00000082482 150 ntBASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 Gm25929-201ENSMUST00000082784 107 ntBASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 Mir324-201ENSMUST00000083600 89 ntBASIC0.53□□□□□ -2.32
Trav3-3Q5R1C3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Gm23203-201ENSMUST00000104374 107 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Gm42606-201ENSMUST00000114209 239 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Gm12785-201ENSMUST00000122052 172 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Gm24595-201ENSMUST00000122501 110 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Gm25970-201ENSMUST00000157165 86 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Gm26358-201ENSMUST00000158215 97 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Gm26401-201ENSMUST00000158502 76 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Gm22888-201ENSMUST00000158640 77 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Gm25643-201ENSMUST00000158874 103 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Gm22914-201ENSMUST00000175195 77 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Mir468-201ENSMUST00000197332 78 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Mir3087-201ENSMUST00000199405 56 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Gm43911-201ENSMUST00000203097 76 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.52□□□□□ -2.33
Trav3-3Q5R1C3 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Trav3-3Q5R1C3 Gm24630-201ENSMUST00000122768 106 ntBASIC0.51□□□□□ -2.33
Trav3-3Q5R1C3 Gm25827-201ENSMUST00000157089 107 ntBASIC0.51□□□□□ -2.33
Trav3-3Q5R1C3 Gm23474-201ENSMUST00000158884 75 ntBASIC0.51□□□□□ -2.33
Trav3-3Q5R1C3 Gm20630-201ENSMUST00000177387 551 ntBASIC0.51□□□□□ -2.33
Trav3-3Q5R1C3 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
Trav3-3Q5R1C3 Mir6240-201ENSMUST00000184281 117 ntBASIC0.51□□□□□ -2.33
Trav3-3Q5R1C3 Gm44352-201ENSMUST00000196358 110 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms