Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm7950-201ENSMUST00000179633 468 ntBASIC0.92□□□□□ -2.26
Trav8d-2Q5R1B6 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.92□□□□□ -2.26
Trav8d-2Q5R1B6 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC0.92□□□□□ -2.26
Trav8d-2Q5R1B6 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.92□□□□□ -2.26
Trav8d-2Q5R1B6 Mir7661-201ENSMUST00000197023 61 ntBASIC0.92□□□□□ -2.26
Trav8d-2Q5R1B6 Gm44462-201ENSMUST00000199696 129 ntBASIC0.92□□□□□ -2.26
Trav8d-2Q5R1B6 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.92□□□□□ -2.26
Trav8d-2Q5R1B6 Gm23126-201ENSMUST00000104260 134 ntBASIC0.91□□□□□ -2.26
Trav8d-2Q5R1B6 Gm13518-201ENSMUST00000120018 233 ntBASIC0.91□□□□□ -2.26
Trav8d-2Q5R1B6 Gm15379-201ENSMUST00000121224 648 ntBASIC0.91□□□□□ -2.26
Trav8d-2Q5R1B6 Gm22477-201ENSMUST00000122569 316 ntBASIC0.91□□□□□ -2.26
Trav8d-2Q5R1B6 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.91□□□□□ -2.26
Trav8d-2Q5R1B6 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.91□□□□□ -2.26
Trav8d-2Q5R1B6 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Trav8d-2Q5R1B6 Gm23793-201ENSMUST00000179396 117 ntBASIC0.91□□□□□ -2.26
Trav8d-2Q5R1B6 Gm27317-201ENSMUST00000183533 95 ntBASIC0.91□□□□□ -2.26
Trav8d-2Q5R1B6 Gm28661-201ENSMUST00000188231 681 ntBASIC0.91□□□□□ -2.26
Trav8d-2Q5R1B6 Gm28408-201ENSMUST00000191557 463 ntBASIC0.91□□□□□ -2.26
Trav8d-2Q5R1B6 Gm44052-201ENSMUST00000203382 396 ntBASIC0.91□□□□□ -2.26
Trav8d-2Q5R1B6 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Trav8d-2Q5R1B6 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.9□□□□□ -2.27
Trav8d-2Q5R1B6 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Trav8d-2Q5R1B6 Gm42606-201ENSMUST00000114209 239 ntBASIC0.9□□□□□ -2.27
Trav8d-2Q5R1B6 Gm11334-201ENSMUST00000121969 156 ntBASIC0.9□□□□□ -2.27
Trav8d-2Q5R1B6 Gm22215-201ENSMUST00000157558 96 ntBASIC0.9□□□□□ -2.27
Trav8d-2Q5R1B6 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Trav8d-2Q5R1B6 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.9□□□□□ -2.27
Trav8d-2Q5R1B6 Gm43199-201ENSMUST00000200019 307 ntBASIC0.9□□□□□ -2.27
Trav8d-2Q5R1B6 Gm34783-201ENSMUST00000209159 303 ntBASIC0.9□□□□□ -2.27
Trav8d-2Q5R1B6 Gm45543-201ENSMUST00000209327 88 ntBASIC0.9□□□□□ -2.27
Trav8d-2Q5R1B6 Gm23851-201ENSMUST00000083831 103 ntBASIC0.9□□□□□ -2.27
Trav8d-2Q5R1B6 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Trav8d-2Q5R1B6 Mir767-201ENSMUST00000103256 107 ntBASIC0.89□□□□□ -2.27
Trav8d-2Q5R1B6 Gm14491-201ENSMUST00000121919 199 ntBASIC0.89□□□□□ -2.27
Trav8d-2Q5R1B6 Gm24211-201ENSMUST00000158264 107 ntBASIC0.89□□□□□ -2.27
Trav8d-2Q5R1B6 Gm27540-201ENSMUST00000184950 187 ntBASIC0.89□□□□□ -2.27
Trav8d-2Q5R1B6 Gm28862-201ENSMUST00000188246 163 ntBASIC0.89□□□□□ -2.27
Trav8d-2Q5R1B6 Gm44473-201ENSMUST00000204039 152 ntBASIC0.89□□□□□ -2.27
Trav8d-2Q5R1B6 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.89□□□□□ -2.27
Trav8d-2Q5R1B6 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.89□□□□□ -2.27
Trav8d-2Q5R1B6 Gm26224-201ENSMUST00000082506 80 ntBASIC0.89□□□□□ -2.27
Trav8d-2Q5R1B6 Gm25929-201ENSMUST00000082784 107 ntBASIC0.89□□□□□ -2.27
Trav8d-2Q5R1B6 Gm24043-201ENSMUST00000083108 116 ntBASIC0.89□□□□□ -2.27
Trav8d-2Q5R1B6 Gm22294-201ENSMUST00000083308 104 ntBASIC0.89□□□□□ -2.27
Trav8d-2Q5R1B6 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Trav8d-2Q5R1B6 Gm24283-201ENSMUST00000104233 107 ntBASIC0.88□□□□□ -2.27
Trav8d-2Q5R1B6 Gm11572-201ENSMUST00000119164 120 ntBASIC0.88□□□□□ -2.27
Trav8d-2Q5R1B6 Gm11794-201ENSMUST00000119446 237 ntBASIC0.88□□□□□ -2.27
Trav8d-2Q5R1B6 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.88□□□□□ -2.27
Trav8d-2Q5R1B6 Gm23106-201ENSMUST00000157554 101 ntBASIC0.88□□□□□ -2.27
Trav8d-2Q5R1B6 Gm25663-201ENSMUST00000157698 135 ntBASIC0.88□□□□□ -2.27
Trav8d-2Q5R1B6 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.88□□□□□ -2.27
Trav8d-2Q5R1B6 Gm25078-201ENSMUST00000082530 107 ntBASIC0.88□□□□□ -2.27
Trav8d-2Q5R1B6 Snora41-201ENSMUST00000082668 132 ntBASIC0.88□□□□□ -2.27
Trav8d-2Q5R1B6 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Trav8d-2Q5R1B6 Gm14980-201ENSMUST00000121247 736 ntBASIC0.87□□□□□ -2.27
Trav8d-2Q5R1B6 Gm23542-201ENSMUST00000158208 96 ntBASIC0.87□□□□□ -2.27
Trav8d-2Q5R1B6 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Trav8d-2Q5R1B6 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.87□□□□□ -2.27
Trav8d-2Q5R1B6 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.87□□□□□ -2.27
Trav8d-2Q5R1B6 Mir7091-201ENSMUST00000184075 79 ntBASIC0.87□□□□□ -2.27
Trav8d-2Q5R1B6 Mir7093-201ENSMUST00000184195 101 ntBASIC0.87□□□□□ -2.27
Trav8d-2Q5R1B6 Gm27587-201ENSMUST00000185116 163 ntBASIC0.87□□□□□ -2.27
Trav8d-2Q5R1B6 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.87□□□□□ -2.27
Trav8d-2Q5R1B6 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.87□□□□□ -2.27
Trav8d-2Q5R1B6 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.87□□□□□ -2.27
Trav8d-2Q5R1B6 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Trav8d-2Q5R1B6 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.86□□□□□ -2.27
Trav8d-2Q5R1B6 Gm26363-201ENSMUST00000158866 83 ntBASIC0.86□□□□□ -2.27
Trav8d-2Q5R1B6 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
Trav8d-2Q5R1B6 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.86□□□□□ -2.27
Trav8d-2Q5R1B6 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.86□□□□□ -2.27
Trav8d-2Q5R1B6 Gm24445-201ENSMUST00000083981 107 ntBASIC0.86□□□□□ -2.27
Trav8d-2Q5R1B6 Gm13577-201ENSMUST00000121365 205 ntBASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 Gm12785-201ENSMUST00000122052 172 ntBASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 Gm22233-201ENSMUST00000157464 114 ntBASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 Gm25868-201ENSMUST00000158253 114 ntBASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 Gm25750-201ENSMUST00000175483 112 ntBASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 Gm25671-201ENSMUST00000178612 105 ntBASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 Gm23307-201ENSMUST00000179167 105 ntBASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 Gm25286-201ENSMUST00000179790 105 ntBASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 Gm9795-201ENSMUST00000062156 693 ntBASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Trav8d-2Q5R1B6 Gm24116-201ENSMUST00000103975 107 ntBASIC0.84□□□□□ -2.27
Trav8d-2Q5R1B6 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Trav8d-2Q5R1B6 Gm22709-201ENSMUST00000116893 111 ntBASIC0.84□□□□□ -2.27
Trav8d-2Q5R1B6 Gm14301-201ENSMUST00000120181 324 ntBASIC0.84□□□□□ -2.27
Trav8d-2Q5R1B6 Gm23262-201ENSMUST00000158323 168 ntBASIC0.84□□□□□ -2.27
Trav8d-2Q5R1B6 Gm23759-201ENSMUST00000158351 268 ntBASIC0.84□□□□□ -2.27
Trav8d-2Q5R1B6 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.84□□□□□ -2.27
Trav8d-2Q5R1B6 Mir3109-201ENSMUST00000175301 88 ntBASIC0.84□□□□□ -2.27
Trav8d-2Q5R1B6 Gm24323-201ENSMUST00000175342 77 ntBASIC0.84□□□□□ -2.27
Trav8d-2Q5R1B6 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.84□□□□□ -2.27
Trav8d-2Q5R1B6 Gm25450-201ENSMUST00000179144 107 ntBASIC0.84□□□□□ -2.27
Trav8d-2Q5R1B6 Gm27420-201ENSMUST00000183823 79 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 157 ms