Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col9a1Q05722 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Col9a1Q05722 Gm22227-201ENSMUST00000157356 259 ntBASIC3.65□□□□□ -1.83
Col9a1Q05722 Gm23826-201ENSMUST00000157394 119 ntBASIC3.65□□□□□ -1.83
Col9a1Q05722 Gm22651-201ENSMUST00000157872 94 ntBASIC3.65□□□□□ -1.83
Col9a1Q05722 Gm35736-201ENSMUST00000203681 313 ntBASIC3.65□□□□□ -1.83
Col9a1Q05722 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.65□□□□□ -1.83
Col9a1Q05722 Gm45268-201ENSMUST00000210046 370 ntBASIC3.65□□□□□ -1.83
Col9a1Q05722 Mir504-201ENSMUST00000093602 79 ntBASIC3.65□□□□□ -1.83
Col9a1Q05722 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC3.65□□□□□ -1.83
Col9a1Q05722 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.64□□□□□ -1.83
Col9a1Q05722 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col9a1Q05722 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.64□□□□□ -1.83
Col9a1Q05722 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Col9a1Q05722 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col9a1Q05722 Gm25370-201ENSMUST00000158159 94 ntBASIC3.64□□□□□ -1.83
Col9a1Q05722 Gm27903-201ENSMUST00000175482 126 ntBASIC3.64□□□□□ -1.83
Col9a1Q05722 Gm27379-201ENSMUST00000183730 123 ntBASIC3.64□□□□□ -1.83
Col9a1Q05722 Gm44476-201ENSMUST00000196225 91 ntBASIC3.64□□□□□ -1.83
Col9a1Q05722 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Col9a1Q05722 Gm26441-201ENSMUST00000082590 104 ntBASIC3.64□□□□□ -1.83
Col9a1Q05722 Gm24536-201ENSMUST00000083144 107 ntBASIC3.64□□□□□ -1.83
Col9a1Q05722 Mir30e-201ENSMUST00000083475 92 ntBASIC3.64□□□□□ -1.83
Col9a1Q05722 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.64□□□□□ -1.83
Col9a1Q05722 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Col9a1Q05722 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col9a1Q05722 AC158598.2-201ENSMUST00000213397 3832 ntBASIC3.63□□□□□ -1.83
Col9a1Q05722 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col9a1Q05722 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Col9a1Q05722 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col9a1Q05722 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col9a1Q05722 Gm16171-201ENSMUST00000118004 324 ntBASIC3.63□□□□□ -1.83
Col9a1Q05722 Rnu7-201ENSMUST00000158458 62 ntBASIC3.63□□□□□ -1.83
Col9a1Q05722 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC3.63□□□□□ -1.83
Col9a1Q05722 Gm23090-201ENSMUST00000177331 78 ntBASIC3.63□□□□□ -1.83
Col9a1Q05722 Gm44376-201ENSMUST00000197570 128 ntBASIC3.63□□□□□ -1.83
Col9a1Q05722 Mir411-201ENSMUST00000083543 82 ntBASIC3.63□□□□□ -1.83
Col9a1Q05722 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col9a1Q05722 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Col9a1Q05722 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col9a1Q05722 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col9a1Q05722 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col9a1Q05722 AC132221.1-201ENSMUST00000220577 3841 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Col9a1Q05722 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col9a1Q05722 Gm22279-201ENSMUST00000157200 93 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 Gm26187-201ENSMUST00000157693 101 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 Gm23761-201ENSMUST00000158347 104 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 Mir3075-201ENSMUST00000175340 85 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 Mir6353-201ENSMUST00000183596 113 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 Gm27698-201ENSMUST00000184060 249 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 Gm37007-201ENSMUST00000194234 319 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col9a1Q05722 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col9a1Q05722 AC153950.1-201ENSMUST00000219916 3238 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 Gm3081-201ENSMUST00000193413 3025 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col9a1Q05722 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.62□□□□□ -1.83
Col9a1Q05722 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Col9a1Q05722 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Col9a1Q05722 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col9a1Q05722 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Col9a1Q05722 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col9a1Q05722 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.61□□□□□ -1.83
Col9a1Q05722 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col9a1Q05722 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col9a1Q05722 Gm26273-201ENSMUST00000104180 131 ntBASIC3.61□□□□□ -1.83
Col9a1Q05722 Gm26342-201ENSMUST00000104557 129 ntBASIC3.61□□□□□ -1.83
Col9a1Q05722 Gm22968-201ENSMUST00000157955 118 ntBASIC3.61□□□□□ -1.83
Col9a1Q05722 Gm22500-201ENSMUST00000158982 99 ntBASIC3.61□□□□□ -1.83
Col9a1Q05722 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.61□□□□□ -1.83
Col9a1Q05722 Gm25705-201ENSMUST00000083119 104 ntBASIC3.61□□□□□ -1.83
Col9a1Q05722 Gm25337-201ENSMUST00000083723 104 ntBASIC3.61□□□□□ -1.83
Col9a1Q05722 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col9a1Q05722 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.61□□□□□ -1.83
Col9a1Q05722 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col9a1Q05722 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col9a1Q05722 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col9a1Q05722 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col9a1Q05722 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col9a1Q05722 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Col9a1Q05722 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Col9a1Q05722 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.6□□□□□ -1.83
Col9a1Q05722 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col9a1Q05722 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC3.6□□□□□ -1.83
Col9a1Q05722 Gm24119-201ENSMUST00000103979 246 ntBASIC3.6□□□□□ -1.83
Col9a1Q05722 Gm24936-201ENSMUST00000122598 247 ntBASIC3.6□□□□□ -1.83
Col9a1Q05722 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.6□□□□□ -1.83
Col9a1Q05722 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col9a1Q05722 Gm25280-201ENSMUST00000157269 101 ntBASIC3.6□□□□□ -1.83
Col9a1Q05722 Gm27582-201ENSMUST00000184084 126 ntBASIC3.6□□□□□ -1.83
Col9a1Q05722 Mir378a-201ENSMUST00000198300 66 ntBASIC3.6□□□□□ -1.83
Col9a1Q05722 Gm22304-201ENSMUST00000082688 129 ntBASIC3.6□□□□□ -1.83
Col9a1Q05722 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.6□□□□□ -1.83
Col9a1Q05722 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col9a1Q05722 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms