Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.16□□□□□ -1.9
Col6a1Q04857 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.16□□□□□ -1.9
Col6a1Q04857 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col6a1Q04857 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col6a1Q04857 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col6a1Q04857 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.16□□□□□ -1.9
Col6a1Q04857 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Col6a1Q04857 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Col6a1Q04857 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Col6a1Q04857 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col6a1Q04857 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 Mir466k-201ENSMUST00000116774 122 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 Snord100-201ENSMUST00000116836 74 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 Gm22678-201ENSMUST00000116974 101 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 Gm11644-201ENSMUST00000119735 150 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 Gm24896-201ENSMUST00000122741 135 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 Gm22651-201ENSMUST00000157872 94 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 Gm24879-201ENSMUST00000158386 143 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 Gm22946-201ENSMUST00000158558 82 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 Gm21064-202ENSMUST00000190583 278 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.15□□□□□ -1.91
Col6a1Q04857 Gm44326-201ENSMUST00000198226 101 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.15□□□□□ -1.91
Col6a1Q04857 Gm25199-201ENSMUST00000083095 104 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 Gm24977-201ENSMUST00000083106 163 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 Gm23247-201ENSMUST00000083373 107 ntBASIC3.15□□□□□ -1.91
Col6a1Q04857 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col6a1Q04857 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col6a1Q04857 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Col6a1Q04857 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col6a1Q04857 Gm22935-201ENSMUST00000103960 104 ntBASIC3.14□□□□□ -1.91
Col6a1Q04857 Mir3106-201ENSMUST00000175401 82 ntBASIC3.14□□□□□ -1.91
Col6a1Q04857 Gm20613-201ENSMUST00000175828 345 ntBASIC3.14□□□□□ -1.91
Col6a1Q04857 Gm23190-201ENSMUST00000180307 64 ntBASIC3.14□□□□□ -1.91
Col6a1Q04857 Gm28912-201ENSMUST00000189001 234 ntBASIC3.14□□□□□ -1.91
Col6a1Q04857 Gm22972-201ENSMUST00000083297 131 ntBASIC3.14□□□□□ -1.91
Col6a1Q04857 Gm24698-201ENSMUST00000083883 130 ntBASIC3.14□□□□□ -1.91
Col6a1Q04857 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col6a1Q04857 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.13□□□□□ -1.91
Col6a1Q04857 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a1Q04857 Snord64-201ENSMUST00000104003 67 ntBASIC3.13□□□□□ -1.91
Col6a1Q04857 DQ267100-201ENSMUST00000122600 72 ntBASIC3.13□□□□□ -1.91
Col6a1Q04857 Gm24894-201ENSMUST00000122744 118 ntBASIC3.13□□□□□ -1.91
Col6a1Q04857 Gm25623-201ENSMUST00000157216 108 ntBASIC3.13□□□□□ -1.91
Col6a1Q04857 Gm20718-201ENSMUST00000176058 259 ntBASIC3.13□□□□□ -1.91
Col6a1Q04857 Gm22070-201ENSMUST00000178475 107 ntBASIC3.13□□□□□ -1.91
Col6a1Q04857 Gm27668-201ENSMUST00000184188 120 ntBASIC3.13□□□□□ -1.91
Col6a1Q04857 Gm42719-201ENSMUST00000197393 355 ntBASIC3.13□□□□□ -1.91
Col6a1Q04857 Gm23377-201ENSMUST00000082943 126 ntBASIC3.13□□□□□ -1.91
Col6a1Q04857 Mir184-201ENSMUST00000083662 69 ntBASIC3.13□□□□□ -1.91
Col6a1Q04857 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.13□□□□□ -1.91
Col6a1Q04857 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col6a1Q04857 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a1Q04857 Gm25060-201ENSMUST00000157374 130 ntBASIC3.12□□□□□ -1.91
Col6a1Q04857 Gm23324-201ENSMUST00000157421 131 ntBASIC3.12□□□□□ -1.91
Col6a1Q04857 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a1Q04857 Mir5123-201ENSMUST00000177794 83 ntBASIC3.12□□□□□ -1.91
Col6a1Q04857 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.12□□□□□ -1.91
Col6a1Q04857 Gm44358-201ENSMUST00000196301 98 ntBASIC3.12□□□□□ -1.91
Col6a1Q04857 Gm44024-201ENSMUST00000203008 476 ntBASIC3.12□□□□□ -1.91
Col6a1Q04857 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC3.12□□□□□ -1.91
Col6a1Q04857 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.12□□□□□ -1.91
Col6a1Q04857 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.12□□□□□ -1.91
Col6a1Q04857 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.12□□□□□ -1.91
Col6a1Q04857 Mir201-201ENSMUST00000083470 66 ntBASIC3.12□□□□□ -1.91
Col6a1Q04857 Gm23040-201ENSMUST00000083869 163 ntBASIC3.12□□□□□ -1.91
Col6a1Q04857 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.12□□□□□ -1.91
Col6a1Q04857 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col6a1Q04857 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a1Q04857 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col6a1Q04857 Gm25323-201ENSMUST00000122555 103 ntBASIC3.11□□□□□ -1.91
Col6a1Q04857 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.11□□□□□ -1.91
Col6a1Q04857 Gm24650-201ENSMUST00000157105 103 ntBASIC3.11□□□□□ -1.91
Col6a1Q04857 Gm25933-201ENSMUST00000178943 108 ntBASIC3.11□□□□□ -1.91
Col6a1Q04857 Gm23445-201ENSMUST00000082800 107 ntBASIC3.11□□□□□ -1.91
Col6a1Q04857 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.1□□□□□ -1.91
Col6a1Q04857 Gm25500-201ENSMUST00000104426 123 ntBASIC3.1□□□□□ -1.91
Col6a1Q04857 Gm22558-201ENSMUST00000157326 95 ntBASIC3.1□□□□□ -1.91
Col6a1Q04857 Gm25882-201ENSMUST00000157784 85 ntBASIC3.1□□□□□ -1.91
Col6a1Q04857 Gm22665-201ENSMUST00000158720 275 ntBASIC3.1□□□□□ -1.91
Col6a1Q04857 Mir3075-201ENSMUST00000175340 85 ntBASIC3.1□□□□□ -1.91
Col6a1Q04857 Gm6801-201ENSMUST00000190697 339 ntBASIC3.1□□□□□ -1.91
Col6a1Q04857 Gm37377-201ENSMUST00000191733 304 ntBASIC3.1□□□□□ -1.91
Col6a1Q04857 AC125167.1-201ENSMUST00000198698 141 ntBASIC3.1□□□□□ -1.91
Col6a1Q04857 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a1Q04857 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a1Q04857 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Col6a1Q04857 Gm45178-201ENSMUST00000207744 4110 ntBASIC3.09□□□□□ -1.91
Col6a1Q04857 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col6a1Q04857 Gm22004-201ENSMUST00000101884 107 ntBASIC3.09□□□□□ -1.91
Col6a1Q04857 Mir450b-201ENSMUST00000102095 82 ntBASIC3.09□□□□□ -1.91
Col6a1Q04857 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.09□□□□□ -1.91
Col6a1Q04857 Gm12513-201ENSMUST00000118617 352 ntBASIC3.09□□□□□ -1.91
Col6a1Q04857 Gm24598-201ENSMUST00000122510 74 ntBASIC3.09□□□□□ -1.91
Col6a1Q04857 Gm25393-201ENSMUST00000157336 285 ntBASIC3.09□□□□□ -1.91
Col6a1Q04857 Gm26494-201ENSMUST00000083154 143 ntBASIC3.09□□□□□ -1.91
Col6a1Q04857 Gm24493-201ENSMUST00000083805 143 ntBASIC3.09□□□□□ -1.91
Col6a1Q04857 Gm25526-201ENSMUST00000104332 132 ntBASIC3.08□□□□□ -1.92
Col6a1Q04857 Gm14567-201ENSMUST00000117155 174 ntBASIC3.08□□□□□ -1.92
Col6a1Q04857 Gm23599-201ENSMUST00000157261 251 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms