Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm22544-201ENSMUST00000104349 127 ntBASIC0.68□□□□□ -2.3
Nkx3-1P97436 Gm22545-201ENSMUST00000104350 132 ntBASIC0.68□□□□□ -2.3
Nkx3-1P97436 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.68□□□□□ -2.3
Nkx3-1P97436 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Nkx3-1P97436 Gm11572-201ENSMUST00000119164 120 ntBASIC0.68□□□□□ -2.3
Nkx3-1P97436 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.68□□□□□ -2.3
Nkx3-1P97436 Gm25970-201ENSMUST00000157165 86 ntBASIC0.68□□□□□ -2.3
Nkx3-1P97436 Gm43472-201ENSMUST00000200175 154 ntBASIC0.68□□□□□ -2.3
Nkx3-1P97436 Gm43898-201ENSMUST00000204456 424 ntBASIC0.68□□□□□ -2.3
Nkx3-1P97436 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.68□□□□□ -2.3
Nkx3-1P97436 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.68□□□□□ -2.3
Nkx3-1P97436 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.68□□□□□ -2.3
Nkx3-1P97436 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.68□□□□□ -2.3
Nkx3-1P97436 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm25416-201ENSMUST00000104221 107 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm24283-201ENSMUST00000104233 107 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Mir293-201ENSMUST00000104841 80 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm42606-201ENSMUST00000114209 239 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm12449-201ENSMUST00000117572 234 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm15002-201ENSMUST00000118406 452 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm13577-201ENSMUST00000121365 205 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Mir3109-201ENSMUST00000175301 88 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm23419-201ENSMUST00000175523 84 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm20630-201ENSMUST00000177387 551 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm25671-201ENSMUST00000178612 105 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm23307-201ENSMUST00000179167 105 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm25286-201ENSMUST00000179790 105 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm25078-201ENSMUST00000082530 107 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm24042-201ENSMUST00000083114 103 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm24494-201ENSMUST00000083804 81 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.67□□□□□ -2.3
Nkx3-1P97436 Gm23836-201ENSMUST00000104434 129 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm14980-201ENSMUST00000121247 736 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm16358-201ENSMUST00000146046 210 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm23106-201ENSMUST00000157554 101 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm25982-201ENSMUST00000157920 101 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm26038-201ENSMUST00000158151 106 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm26400-201ENSMUST00000175012 85 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Mir5104-201ENSMUST00000175319 94 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm23148-201ENSMUST00000180367 107 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm37713-201ENSMUST00000191746 198 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm42719-201ENSMUST00000197393 355 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm45878-201ENSMUST00000211839 241 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm23404-201ENSMUST00000082543 97 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm25258-201ENSMUST00000083049 107 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Snord1a-201ENSMUST00000083160 74 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.66□□□□□ -2.3
Nkx3-1P97436 Gm24579-201ENSMUST00000103964 144 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Gm22785-201ENSMUST00000104087 132 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Gm24588-201ENSMUST00000116696 83 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Gm22032-201ENSMUST00000116946 116 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Gm22477-201ENSMUST00000122569 316 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Gm25827-201ENSMUST00000157089 107 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Gm24323-201ENSMUST00000175342 77 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Gm27540-201ENSMUST00000184950 187 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Gm43238-201ENSMUST00000196463 359 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Gm23140-201ENSMUST00000082487 107 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Gm24038-201ENSMUST00000082872 159 ntBASIC0.65□□□□□ -2.31
Nkx3-1P97436 Gm26074-201ENSMUST00000104063 129 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm11834-201ENSMUST00000122257 585 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm24629-201ENSMUST00000122762 89 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm25663-201ENSMUST00000157698 135 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm24808-201ENSMUST00000157993 118 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm26022-201ENSMUST00000158663 108 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm23182-201ENSMUST00000158688 135 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm23474-201ENSMUST00000158884 75 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm22403-201ENSMUST00000174919 84 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Mir3061-201ENSMUST00000175129 91 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm23793-201ENSMUST00000179396 117 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm27974-201ENSMUST00000183415 105 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm7654-201ENSMUST00000186738 683 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm19777-201ENSMUST00000191940 358 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm23735-201ENSMUST00000082551 134 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm22364-201ENSMUST00000083097 98 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Gm23851-201ENSMUST00000083831 103 ntBASIC0.64□□□□□ -2.31
Nkx3-1P97436 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Nkx3-1P97436 Gm23013-201ENSMUST00000104146 106 ntBASIC0.63□□□□□ -2.31
Nkx3-1P97436 Gm11794-201ENSMUST00000119446 237 ntBASIC0.63□□□□□ -2.31
Nkx3-1P97436 Gm11334-201ENSMUST00000121969 156 ntBASIC0.63□□□□□ -2.31
Nkx3-1P97436 Gm26194-201ENSMUST00000175036 71 ntBASIC0.63□□□□□ -2.31
Nkx3-1P97436 Gm22114-201ENSMUST00000177756 107 ntBASIC0.63□□□□□ -2.31
Nkx3-1P97436 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Nkx3-1P97436 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.63□□□□□ -2.31
Nkx3-1P97436 Gm28921-201ENSMUST00000190219 378 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms