Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm22299-201ENSMUST00000082663 136 ntBASIC1.82□□□□□ -2.12
NcanP55066 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NcanP55066 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.82□□□□□ -2.12
NcanP55066 Mir374b-201ENSMUST00000102314 95 ntBASIC1.81□□□□□ -2.12
NcanP55066 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NcanP55066 Gm22315-201ENSMUST00000158010 143 ntBASIC1.81□□□□□ -2.12
NcanP55066 Gm20438-201ENSMUST00000174441 329 ntBASIC1.81□□□□□ -2.12
NcanP55066 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
NcanP55066 Gm26435-201ENSMUST00000179026 107 ntBASIC1.81□□□□□ -2.12
NcanP55066 Gm28921-201ENSMUST00000190219 378 ntBASIC1.81□□□□□ -2.12
NcanP55066 Gm44977-201ENSMUST00000205283 420 ntBASIC1.81□□□□□ -2.12
NcanP55066 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.81□□□□□ -2.12
NcanP55066 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.81□□□□□ -2.12
NcanP55066 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.81□□□□□ -2.12
NcanP55066 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.81□□□□□ -2.12
NcanP55066 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.81□□□□□ -2.12
NcanP55066 Gm25788-201ENSMUST00000082721 131 ntBASIC1.81□□□□□ -2.12
NcanP55066 Mir300-201ENSMUST00000083485 79 ntBASIC1.81□□□□□ -2.12
NcanP55066 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.81□□□□□ -2.12
NcanP55066 Gm25875-201ENSMUST00000104323 107 ntBASIC1.8□□□□□ -2.12
NcanP55066 Gm22281-201ENSMUST00000157198 103 ntBASIC1.8□□□□□ -2.12
NcanP55066 Gm26181-201ENSMUST00000157687 106 ntBASIC1.8□□□□□ -2.12
NcanP55066 Gm22731-201ENSMUST00000158086 94 ntBASIC1.8□□□□□ -2.12
NcanP55066 Gm27579-201ENSMUST00000158113 63 ntBASIC1.8□□□□□ -2.12
NcanP55066 Gm22537-201ENSMUST00000158172 199 ntBASIC1.8□□□□□ -2.12
NcanP55066 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NcanP55066 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.8□□□□□ -2.12
NcanP55066 Gm37918-201ENSMUST00000192071 120 ntBASIC1.8□□□□□ -2.12
NcanP55066 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NcanP55066 Mir3961-201ENSMUST00000198795 59 ntBASIC1.8□□□□□ -2.12
NcanP55066 Gm42774-201ENSMUST00000198854 283 ntBASIC1.8□□□□□ -2.12
NcanP55066 Gm44052-201ENSMUST00000203382 396 ntBASIC1.8□□□□□ -2.12
NcanP55066 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.8□□□□□ -2.12
NcanP55066 Gm5899-201ENSMUST00000071770 270 ntBASIC1.8□□□□□ -2.12
NcanP55066 Gm24355-201ENSMUST00000082858 122 ntBASIC1.8□□□□□ -2.12
NcanP55066 Gm23015-201ENSMUST00000104145 128 ntBASIC1.79□□□□□ -2.12
NcanP55066 Gm17161-201ENSMUST00000169187 524 ntBASIC1.79□□□□□ -2.12
NcanP55066 Mir6336-201ENSMUST00000183581 130 ntBASIC1.79□□□□□ -2.12
NcanP55066 Gm27544-201ENSMUST00000185069 155 ntBASIC1.79□□□□□ -2.12
NcanP55066 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NcanP55066 Gm42533-201ENSMUST00000196247 157 ntBASIC1.79□□□□□ -2.12
NcanP55066 Gm18546-201ENSMUST00000197245 676 ntBASIC1.79□□□□□ -2.12
NcanP55066 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NcanP55066 Gm45543-201ENSMUST00000209327 88 ntBASIC1.79□□□□□ -2.12
NcanP55066 Gm45859-201ENSMUST00000212794 214 ntBASIC1.79□□□□□ -2.12
NcanP55066 Gm46997-201ENSMUST00000222108 217 ntBASIC1.79□□□□□ -2.12
NcanP55066 Gm9795-201ENSMUST00000062156 693 ntBASIC1.79□□□□□ -2.12
NcanP55066 Gm22358-201ENSMUST00000082877 122 ntBASIC1.79□□□□□ -2.12
NcanP55066 Gm25188-201ENSMUST00000083913 122 ntBASIC1.79□□□□□ -2.12
NcanP55066 Gm24164-201ENSMUST00000093663 104 ntBASIC1.79□□□□□ -2.12
NcanP55066 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.79□□□□□ -2.12
NcanP55066 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.79□□□□□ -2.12
NcanP55066 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
NcanP55066 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.78□□□□□ -2.12
NcanP55066 Gm24555-201ENSMUST00000104548 124 ntBASIC1.78□□□□□ -2.12
NcanP55066 Gm12686-201ENSMUST00000120546 397 ntBASIC1.78□□□□□ -2.12
NcanP55066 Gm23640-201ENSMUST00000157860 104 ntBASIC1.78□□□□□ -2.12
NcanP55066 Gm25333-201ENSMUST00000158035 246 ntBASIC1.78□□□□□ -2.12
NcanP55066 Gm26287-201ENSMUST00000158887 81 ntBASIC1.78□□□□□ -2.12
NcanP55066 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.78□□□□□ -2.12
NcanP55066 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.78□□□□□ -2.12
NcanP55066 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.78□□□□□ -2.12
NcanP55066 Gm22621-201ENSMUST00000179678 74 ntBASIC1.78□□□□□ -2.12
NcanP55066 Gm43220-201ENSMUST00000199299 282 ntBASIC1.78□□□□□ -2.12
NcanP55066 CT030166.3-201ENSMUST00000223203 193 ntBASIC1.78□□□□□ -2.12
NcanP55066 Mir340-201ENSMUST00000083483 98 ntBASIC1.78□□□□□ -2.12
NcanP55066 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.78□□□□□ -2.12
NcanP55066 Gm23126-201ENSMUST00000104260 134 ntBASIC1.77□□□□□ -2.13
NcanP55066 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
NcanP55066 Gm12143-201ENSMUST00000119666 332 ntBASIC1.77□□□□□ -2.13
NcanP55066 Gm22027-201ENSMUST00000122737 127 ntBASIC1.77□□□□□ -2.13
NcanP55066 Gm24729-201ENSMUST00000158225 137 ntBASIC1.77□□□□□ -2.13
NcanP55066 Gm24770-201ENSMUST00000158505 92 ntBASIC1.77□□□□□ -2.13
NcanP55066 Gm25958-201ENSMUST00000175114 71 ntBASIC1.77□□□□□ -2.13
NcanP55066 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.77□□□□□ -2.13
NcanP55066 Gm24390-201ENSMUST00000179578 62 ntBASIC1.77□□□□□ -2.13
NcanP55066 Gm27545-201ENSMUST00000184755 202 ntBASIC1.77□□□□□ -2.13
NcanP55066 Gm37089-201ENSMUST00000195616 129 ntBASIC1.77□□□□□ -2.13
NcanP55066 Mir465d-201ENSMUST00000196314 58 ntBASIC1.77□□□□□ -2.13
NcanP55066 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.77□□□□□ -2.13
NcanP55066 Gm33866-201ENSMUST00000196911 289 ntBASIC1.77□□□□□ -2.13
NcanP55066 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.77□□□□□ -2.13
NcanP55066 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.77□□□□□ -2.13
NcanP55066 Gm24615-201ENSMUST00000083268 113 ntBASIC1.77□□□□□ -2.13
NcanP55066 Gm24423-201ENSMUST00000101982 106 ntBASIC1.76□□□□□ -2.13
NcanP55066 Gm25565-201ENSMUST00000104605 105 ntBASIC1.76□□□□□ -2.13
NcanP55066 Mir881-201ENSMUST00000104844 78 ntBASIC1.76□□□□□ -2.13
NcanP55066 Gm25316-201ENSMUST00000116826 118 ntBASIC1.76□□□□□ -2.13
NcanP55066 Gm23982-201ENSMUST00000157141 106 ntBASIC1.76□□□□□ -2.13
NcanP55066 Gm22118-201ENSMUST00000175593 171 ntBASIC1.76□□□□□ -2.13
NcanP55066 Gm24415-201ENSMUST00000180218 107 ntBASIC1.76□□□□□ -2.13
NcanP55066 Gm27694-201ENSMUST00000184740 86 ntBASIC1.76□□□□□ -2.13
NcanP55066 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.76□□□□□ -2.13
NcanP55066 Gm45456-201ENSMUST00000210841 243 ntBASIC1.76□□□□□ -2.13
NcanP55066 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.76□□□□□ -2.13
NcanP55066 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.76□□□□□ -2.13
NcanP55066 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.76□□□□□ -2.13
NcanP55066 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.75□□□□□ -2.13
NcanP55066 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.75□□□□□ -2.13
NcanP55066 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 165.7 ms