Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm25741-201ENSMUST00000179825 79 ntBASIC3.07□□□□□ -1.92
Sox1P53783 Gm24759-201ENSMUST00000179827 79 ntBASIC3.07□□□□□ -1.92
Sox1P53783 Gm24219-201ENSMUST00000179861 79 ntBASIC3.07□□□□□ -1.92
Sox1P53783 Gm27672-201ENSMUST00000183751 204 ntBASIC3.07□□□□□ -1.92
Sox1P53783 Gm44482-201ENSMUST00000199232 103 ntBASIC3.07□□□□□ -1.92
Sox1P53783 Gm25130-201ENSMUST00000082650 156 ntBASIC3.07□□□□□ -1.92
Sox1P53783 Gm23254-201ENSMUST00000097244 79 ntBASIC3.07□□□□□ -1.92
Sox1P53783 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Sox1P53783 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
Sox1P53783 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Sox1P53783 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Sox1P53783 Gm13588-201ENSMUST00000120026 135 ntBASIC3.06□□□□□ -1.92
Sox1P53783 Gm26091-201ENSMUST00000122704 82 ntBASIC3.06□□□□□ -1.92
Sox1P53783 Gm24894-201ENSMUST00000122744 118 ntBASIC3.06□□□□□ -1.92
Sox1P53783 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC3.06□□□□□ -1.92
Sox1P53783 Gm23670-201ENSMUST00000157469 119 ntBASIC3.06□□□□□ -1.92
Sox1P53783 Gm22665-201ENSMUST00000158720 275 ntBASIC3.06□□□□□ -1.92
Sox1P53783 Gm22708-201ENSMUST00000158987 103 ntBASIC3.06□□□□□ -1.92
Sox1P53783 Gm25069-201ENSMUST00000175238 86 ntBASIC3.06□□□□□ -1.92
Sox1P53783 Gm37377-201ENSMUST00000191733 304 ntBASIC3.06□□□□□ -1.92
Sox1P53783 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Sox1P53783 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Sox1P53783 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
Sox1P53783 Gm25623-201ENSMUST00000157216 108 ntBASIC3.05□□□□□ -1.92
Sox1P53783 Snord11-201ENSMUST00000158468 84 ntBASIC3.05□□□□□ -1.92
Sox1P53783 Gm25488-201ENSMUST00000158728 118 ntBASIC3.05□□□□□ -1.92
Sox1P53783 Gm22264-201ENSMUST00000178200 107 ntBASIC3.05□□□□□ -1.92
Sox1P53783 Mir7226-201ENSMUST00000184953 60 ntBASIC3.05□□□□□ -1.92
Sox1P53783 Gm44057-201ENSMUST00000204547 96 ntBASIC3.05□□□□□ -1.92
Sox1P53783 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.05□□□□□ -1.92
Sox1P53783 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC3.05□□□□□ -1.92
Sox1P53783 Gm25513-201ENSMUST00000083861 162 ntBASIC3.05□□□□□ -1.92
Sox1P53783 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.05□□□□□ -1.92
Sox1P53783 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.05□□□□□ -1.92
Sox1P53783 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Sox1P53783 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.04□□□□□ -1.92
Sox1P53783 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Sox1P53783 Gm22658-201ENSMUST00000104196 155 ntBASIC3.04□□□□□ -1.92
Sox1P53783 Gm22558-201ENSMUST00000157326 95 ntBASIC3.04□□□□□ -1.92
Sox1P53783 Gm23588-201ENSMUST00000157659 99 ntBASIC3.04□□□□□ -1.92
Sox1P53783 Gm38356-201ENSMUST00000194313 408 ntBASIC3.04□□□□□ -1.92
Sox1P53783 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.04□□□□□ -1.92
Sox1P53783 Gm25124-201ENSMUST00000083345 164 ntBASIC3.04□□□□□ -1.92
Sox1P53783 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Sox1P53783 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Sox1P53783 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Sox1P53783 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Sox1P53783 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Sox1P53783 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Sox1P53783 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Sox1P53783 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.03□□□□□ -1.92
Sox1P53783 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Sox1P53783 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Sox1P53783 Snora36b-201ENSMUST00000104383 132 ntBASIC3.03□□□□□ -1.92
Sox1P53783 Gm15536-201ENSMUST00000121411 114 ntBASIC3.03□□□□□ -1.92
Sox1P53783 Gm22212-201ENSMUST00000158096 106 ntBASIC3.03□□□□□ -1.92
Sox1P53783 Mir1927-201ENSMUST00000158579 109 ntBASIC3.03□□□□□ -1.92
Sox1P53783 Gm5224-201ENSMUST00000183060 350 ntBASIC3.03□□□□□ -1.92
Sox1P53783 Mir7039-201ENSMUST00000183852 85 ntBASIC3.03□□□□□ -1.92
Sox1P53783 AC147101.2-201ENSMUST00000219756 184 ntBASIC3.03□□□□□ -1.92
Sox1P53783 Mir369-201ENSMUST00000083627 79 ntBASIC3.03□□□□□ -1.92
Sox1P53783 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Sox1P53783 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
Sox1P53783 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.02□□□□□ -1.93
Sox1P53783 Gm24879-201ENSMUST00000158386 143 ntBASIC3.02□□□□□ -1.93
Sox1P53783 Gm22947-201ENSMUST00000158559 91 ntBASIC3.02□□□□□ -1.93
Sox1P53783 Gm25491-201ENSMUST00000158733 308 ntBASIC3.02□□□□□ -1.93
Sox1P53783 Mir669j-201ENSMUST00000179023 121 ntBASIC3.02□□□□□ -1.93
Sox1P53783 Gm27698-201ENSMUST00000184060 249 ntBASIC3.02□□□□□ -1.93
Sox1P53783 Gm44921-201ENSMUST00000205290 301 ntBASIC3.02□□□□□ -1.93
Sox1P53783 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Sox1P53783 Gm10212-201ENSMUST00000087884 324 ntBASIC3.02□□□□□ -1.93
Sox1P53783 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Sox1P53783 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Sox1P53783 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Sox1P53783 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Sox1P53783 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Sox1P53783 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.01□□□□□ -1.93
Sox1P53783 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.01□□□□□ -1.93
Sox1P53783 Gm14502-201ENSMUST00000118154 113 ntBASIC3.01□□□□□ -1.93
Sox1P53783 Gm24210-201ENSMUST00000158263 133 ntBASIC3.01□□□□□ -1.93
Sox1P53783 Mir6350-201ENSMUST00000183639 105 ntBASIC3.01□□□□□ -1.93
Sox1P53783 Gm18486-201ENSMUST00000184040 298 ntBASIC3.01□□□□□ -1.93
Sox1P53783 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.01□□□□□ -1.93
Sox1P53783 Mir19b-2-201ENSMUST00000083539 84 ntBASIC3.01□□□□□ -1.93
Sox1P53783 Mir127-201ENSMUST00000093568 70 ntBASIC3.01□□□□□ -1.93
Sox1P53783 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Sox1P53783 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Sox1P53783 Gm11253-201ENSMUST00000118486 201 ntBASIC3□□□□□ -1.93
Sox1P53783 Gm24842-201ENSMUST00000158681 54 ntBASIC3□□□□□ -1.93
Sox1P53783 Mir7026-201ENSMUST00000184384 67 ntBASIC3□□□□□ -1.93
Sox1P53783 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Sox1P53783 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.99□□□□□ -1.93
Sox1P53783 Gm25500-201ENSMUST00000104426 123 ntBASIC2.99□□□□□ -1.93
Sox1P53783 Gm13433-201ENSMUST00000121701 240 ntBASIC2.99□□□□□ -1.93
Sox1P53783 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.99□□□□□ -1.93
Sox1P53783 Gm23567-201ENSMUST00000178005 107 ntBASIC2.99□□□□□ -1.93
Sox1P53783 Mir7013-201ENSMUST00000183540 72 ntBASIC2.99□□□□□ -1.93
Sox1P53783 Mir6406-201ENSMUST00000183592 120 ntBASIC2.99□□□□□ -1.93
Sox1P53783 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 111.4 ms