Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.63□□□□□ -1.99
Usp4P35123 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Usp4P35123 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Usp4P35123 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.63□□□□□ -1.99
Usp4P35123 Mir682-201ENSMUST00000102281 96 ntBASIC2.63□□□□□ -1.99
Usp4P35123 Gm23772-201ENSMUST00000104433 102 ntBASIC2.63□□□□□ -1.99
Usp4P35123 Gm22850-201ENSMUST00000157714 82 ntBASIC2.63□□□□□ -1.99
Usp4P35123 Gm23665-201ENSMUST00000158054 62 ntBASIC2.63□□□□□ -1.99
Usp4P35123 Gm24922-201ENSMUST00000158511 102 ntBASIC2.63□□□□□ -1.99
Usp4P35123 Gm44555-201ENSMUST00000209008 148 ntBASIC2.63□□□□□ -1.99
Usp4P35123 Gm45456-201ENSMUST00000210841 243 ntBASIC2.63□□□□□ -1.99
Usp4P35123 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.63□□□□□ -1.99
Usp4P35123 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.63□□□□□ -1.99
Usp4P35123 Snord104-201ENSMUST00000083192 70 ntBASIC2.63□□□□□ -1.99
Usp4P35123 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.63□□□□□ -1.99
Usp4P35123 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Usp4P35123 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
Usp4P35123 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Usp4P35123 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Usp4P35123 Gm24280-201ENSMUST00000104237 134 ntBASIC2.62□□□□□ -1.99
Usp4P35123 Gm24632-201ENSMUST00000122770 323 ntBASIC2.62□□□□□ -1.99
Usp4P35123 Gm24304-201ENSMUST00000177635 107 ntBASIC2.62□□□□□ -1.99
Usp4P35123 Gm28900-201ENSMUST00000185232 156 ntBASIC2.62□□□□□ -1.99
Usp4P35123 Gm8031-201ENSMUST00000213430 626 ntBASIC2.62□□□□□ -1.99
Usp4P35123 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Usp4P35123 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.61□□□□□ -1.99
Usp4P35123 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.61□□□□□ -1.99
Usp4P35123 Gm23337-201ENSMUST00000158959 118 ntBASIC2.61□□□□□ -1.99
Usp4P35123 Gm24510-201ENSMUST00000174965 94 ntBASIC2.61□□□□□ -1.99
Usp4P35123 Gm28169-201ENSMUST00000190342 345 ntBASIC2.61□□□□□ -1.99
Usp4P35123 Gm43722-201ENSMUST00000196054 124 ntBASIC2.61□□□□□ -1.99
Usp4P35123 Gm44481-201ENSMUST00000197288 84 ntBASIC2.61□□□□□ -1.99
Usp4P35123 Gm44339-201ENSMUST00000200598 84 ntBASIC2.61□□□□□ -1.99
Usp4P35123 Gm24148-201ENSMUST00000082762 80 ntBASIC2.61□□□□□ -1.99
Usp4P35123 Gm24449-201ENSMUST00000083985 106 ntBASIC2.61□□□□□ -1.99
Usp4P35123 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Usp4P35123 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.6□□□□□ -1.99
Usp4P35123 Gm22750-201ENSMUST00000102076 103 ntBASIC2.6□□□□□ -1.99
Usp4P35123 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Usp4P35123 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.6□□□□□ -1.99
Usp4P35123 Gm25825-201ENSMUST00000157091 124 ntBASIC2.6□□□□□ -1.99
Usp4P35123 Gm23033-201ENSMUST00000157996 134 ntBASIC2.6□□□□□ -1.99
Usp4P35123 Snord11-201ENSMUST00000158468 84 ntBASIC2.6□□□□□ -1.99
Usp4P35123 Gm25491-201ENSMUST00000158733 308 ntBASIC2.6□□□□□ -1.99
Usp4P35123 Mir3075-201ENSMUST00000175340 85 ntBASIC2.6□□□□□ -1.99
Usp4P35123 Gm22775-201ENSMUST00000177630 120 ntBASIC2.6□□□□□ -1.99
Usp4P35123 Gm23569-201ENSMUST00000180120 120 ntBASIC2.6□□□□□ -1.99
Usp4P35123 Mir6350-201ENSMUST00000183639 105 ntBASIC2.6□□□□□ -1.99
Usp4P35123 Mir155-201ENSMUST00000083463 65 ntBASIC2.6□□□□□ -1.99
Usp4P35123 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
Usp4P35123 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.6□□□□□ -1.99
Usp4P35123 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Usp4P35123 Mir374b-201ENSMUST00000102314 95 ntBASIC2.59□□□□□ -1.99
Usp4P35123 Gm23044-201ENSMUST00000157891 100 ntBASIC2.59□□□□□ -1.99
Usp4P35123 Gm25707-201ENSMUST00000175120 96 ntBASIC2.59□□□□□ -1.99
Usp4P35123 Gm24813-201ENSMUST00000175310 84 ntBASIC2.59□□□□□ -1.99
Usp4P35123 Gm23090-201ENSMUST00000177331 78 ntBASIC2.59□□□□□ -1.99
Usp4P35123 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.59□□□□□ -1.99
Usp4P35123 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.59□□□□□ -1.99
Usp4P35123 Gm26494-201ENSMUST00000083154 143 ntBASIC2.59□□□□□ -1.99
Usp4P35123 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.59□□□□□ -1.99
Usp4P35123 Gm24493-201ENSMUST00000083805 143 ntBASIC2.59□□□□□ -1.99
Usp4P35123 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.59□□□□□ -1.99
Usp4P35123 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.58□□□□□ -2
Usp4P35123 Gm25980-201ENSMUST00000157176 218 ntBASIC2.58□□□□□ -2
Usp4P35123 Gm22612-201ENSMUST00000158293 101 ntBASIC2.58□□□□□ -2
Usp4P35123 Gm23260-201ENSMUST00000158317 172 ntBASIC2.58□□□□□ -2
Usp4P35123 Gm22664-201ENSMUST00000158719 105 ntBASIC2.58□□□□□ -2
Usp4P35123 Gm26360-201ENSMUST00000158872 103 ntBASIC2.58□□□□□ -2
Usp4P35123 Mir7068-201ENSMUST00000183439 74 ntBASIC2.58□□□□□ -2
Usp4P35123 Mir3069-201ENSMUST00000198802 65 ntBASIC2.58□□□□□ -2
Usp4P35123 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.58□□□□□ -2
Usp4P35123 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Usp4P35123 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Usp4P35123 Mir466k-201ENSMUST00000116774 122 ntBASIC2.57□□□□□ -2
Usp4P35123 Gm37545-201ENSMUST00000186512 148 ntBASIC2.57□□□□□ -2
Usp4P35123 Gm28409-201ENSMUST00000187064 103 ntBASIC2.57□□□□□ -2
Usp4P35123 Gm43264-201ENSMUST00000202284 325 ntBASIC2.57□□□□□ -2
Usp4P35123 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.57□□□□□ -2
Usp4P35123 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Usp4P35123 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Usp4P35123 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Usp4P35123 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.56□□□□□ -2
Usp4P35123 Gm24375-201ENSMUST00000104397 132 ntBASIC2.56□□□□□ -2
Usp4P35123 Gm24141-201ENSMUST00000122776 115 ntBASIC2.56□□□□□ -2
Usp4P35123 Gm25828-201ENSMUST00000157087 95 ntBASIC2.56□□□□□ -2
Usp4P35123 Gm23983-201ENSMUST00000157142 114 ntBASIC2.56□□□□□ -2
Usp4P35123 Gm23080-201ENSMUST00000157846 103 ntBASIC2.56□□□□□ -2
Usp4P35123 Gm22966-201ENSMUST00000157957 129 ntBASIC2.56□□□□□ -2
Usp4P35123 Gm24075-201ENSMUST00000158175 72 ntBASIC2.56□□□□□ -2
Usp4P35123 Gm22947-201ENSMUST00000158559 91 ntBASIC2.56□□□□□ -2
Usp4P35123 Gm3852-201ENSMUST00000182781 264 ntBASIC2.56□□□□□ -2
Usp4P35123 Gm24705-201ENSMUST00000082808 107 ntBASIC2.56□□□□□ -2
Usp4P35123 Gm25628-201ENSMUST00000084002 105 ntBASIC2.56□□□□□ -2
Usp4P35123 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Usp4P35123 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.55□□□□□ -2
Usp4P35123 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Usp4P35123 Gm25485-201ENSMUST00000104120 132 ntBASIC2.55□□□□□ -2
Usp4P35123 Gm23043-201ENSMUST00000157890 109 ntBASIC2.55□□□□□ -2
Usp4P35123 Gm45492-201ENSMUST00000211611 288 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms