Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.08□□□□□ -1.92
Hoxd9P28357 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.07□□□□□ -1.92
Hoxd9P28357 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Hoxd9P28357 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.07□□□□□ -1.92
Hoxd9P28357 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Hoxd9P28357 Gm22772-201ENSMUST00000104451 121 ntBASIC3.07□□□□□ -1.92
Hoxd9P28357 Gm9119-201ENSMUST00000118866 495 ntBASIC3.07□□□□□ -1.92
Hoxd9P28357 Gm22956-201ENSMUST00000122520 80 ntBASIC3.07□□□□□ -1.92
Hoxd9P28357 Gm15281-201ENSMUST00000125181 351 ntBASIC3.07□□□□□ -1.92
Hoxd9P28357 Gm22963-201ENSMUST00000157960 91 ntBASIC3.07□□□□□ -1.92
Hoxd9P28357 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.07□□□□□ -1.92
Hoxd9P28357 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.07□□□□□ -1.92
Hoxd9P28357 Gm25513-201ENSMUST00000083861 162 ntBASIC3.07□□□□□ -1.92
Hoxd9P28357 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hoxd9P28357 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Hoxd9P28357 AC158598.2-201ENSMUST00000213397 3832 ntBASIC3.07□□□□□ -1.92
Hoxd9P28357 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Hoxd9P28357 Gm14448-201ENSMUST00000116383 210 ntBASIC3.06□□□□□ -1.92
Hoxd9P28357 Gm24627-201ENSMUST00000122764 138 ntBASIC3.06□□□□□ -1.92
Hoxd9P28357 Gm22221-201ENSMUST00000157362 103 ntBASIC3.06□□□□□ -1.92
Hoxd9P28357 Gm26415-201ENSMUST00000157673 292 ntBASIC3.06□□□□□ -1.92
Hoxd9P28357 Mir1927-201ENSMUST00000158579 109 ntBASIC3.06□□□□□ -1.92
Hoxd9P28357 Gm25933-201ENSMUST00000178943 108 ntBASIC3.06□□□□□ -1.92
Hoxd9P28357 Gm43239-201ENSMUST00000200131 201 ntBASIC3.06□□□□□ -1.92
Hoxd9P28357 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Hoxd9P28357 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Hoxd9P28357 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Hoxd9P28357 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Hoxd9P28357 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hoxd9P28357 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hoxd9P28357 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Hoxd9P28357 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Hoxd9P28357 Gm26420-201ENSMUST00000104273 103 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 Gm22678-201ENSMUST00000116974 101 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 Gm22722-201ENSMUST00000157467 132 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 Gm22833-201ENSMUST00000158292 132 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 Gm23384-201ENSMUST00000158593 103 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 Gm27446-201ENSMUST00000183963 89 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 Gm18486-201ENSMUST00000184040 298 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 Gm37085-201ENSMUST00000193780 196 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC3.05□□□□□ -1.92
Hoxd9P28357 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hoxd9P28357 Gm43932-201ENSMUST00000204499 52 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Hoxd9P28357 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Hoxd9P28357 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Hoxd9P28357 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Hoxd9P28357 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.05□□□□□ -1.92
Hoxd9P28357 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Hoxd9P28357 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Hoxd9P28357 Gm25407-201ENSMUST00000104102 134 ntBASIC3.04□□□□□ -1.92
Hoxd9P28357 Gm12412-201ENSMUST00000121867 328 ntBASIC3.04□□□□□ -1.92
Hoxd9P28357 Gm24598-201ENSMUST00000122510 74 ntBASIC3.04□□□□□ -1.92
Hoxd9P28357 Gm23791-201ENSMUST00000122553 293 ntBASIC3.04□□□□□ -1.92
Hoxd9P28357 Gm23113-201ENSMUST00000158477 99 ntBASIC3.04□□□□□ -1.92
Hoxd9P28357 Gm27415-201ENSMUST00000183720 95 ntBASIC3.04□□□□□ -1.92
Hoxd9P28357 Mir6377-201ENSMUST00000183760 114 ntBASIC3.04□□□□□ -1.92
Hoxd9P28357 Gm44464-201ENSMUST00000198010 138 ntBASIC3.04□□□□□ -1.92
Hoxd9P28357 Gm44459-201ENSMUST00000203926 160 ntBASIC3.04□□□□□ -1.92
Hoxd9P28357 Gm45456-201ENSMUST00000210841 243 ntBASIC3.04□□□□□ -1.92
Hoxd9P28357 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hoxd9P28357 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hoxd9P28357 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Hoxd9P28357 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hoxd9P28357 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hoxd9P28357 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.04□□□□□ -1.92
Hoxd9P28357 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Hoxd9P28357 AC153966.1-201ENSMUST00000220106 3764 ntBASIC3.03□□□□□ -1.92
Hoxd9P28357 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Hoxd9P28357 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Hoxd9P28357 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.03□□□□□ -1.92
Hoxd9P28357 Gm15190-201ENSMUST00000120855 276 ntBASIC3.03□□□□□ -1.92
Hoxd9P28357 Gm25769-201ENSMUST00000158569 127 ntBASIC3.03□□□□□ -1.92
Hoxd9P28357 Gm18433-202ENSMUST00000195682 196 ntBASIC3.03□□□□□ -1.92
Hoxd9P28357 Gm9712-201ENSMUST00000210842 311 ntBASIC3.03□□□□□ -1.92
Hoxd9P28357 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Hoxd9P28357 Gm23056-201ENSMUST00000082803 111 ntBASIC3.03□□□□□ -1.92
Hoxd9P28357 Gm23040-201ENSMUST00000083869 163 ntBASIC3.03□□□□□ -1.92
Hoxd9P28357 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Hoxd9P28357 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.03□□□□□ -1.92
Hoxd9P28357 Gm24119-201ENSMUST00000103979 246 ntBASIC3.02□□□□□ -1.93
Hoxd9P28357 Mir291a-201ENSMUST00000104815 82 ntBASIC3.02□□□□□ -1.93
Hoxd9P28357 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.02□□□□□ -1.93
Hoxd9P28357 Gm26088-201ENSMUST00000157896 131 ntBASIC3.02□□□□□ -1.93
Hoxd9P28357 Gm22532-201ENSMUST00000158822 140 ntBASIC3.02□□□□□ -1.93
Hoxd9P28357 Gm23369-201ENSMUST00000175406 105 ntBASIC3.02□□□□□ -1.93
Hoxd9P28357 Gm9156-201ENSMUST00000189660 463 ntBASIC3.02□□□□□ -1.93
Hoxd9P28357 Gm19563-201ENSMUST00000222031 270 ntBASIC3.02□□□□□ -1.93
Hoxd9P28357 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.02□□□□□ -1.93
Hoxd9P28357 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.02□□□□□ -1.93
Hoxd9P28357 Gm24524-201ENSMUST00000082925 170 ntBASIC3.02□□□□□ -1.93
Hoxd9P28357 Mir340-201ENSMUST00000083483 98 ntBASIC3.02□□□□□ -1.93
Hoxd9P28357 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC3.02□□□□□ -1.93
Hoxd9P28357 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Hoxd9P28357 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Hoxd9P28357 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms