Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Gm43884-201ENSMUST00000204251 559 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
Sdc1P18828 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Gm23130-201ENSMUST00000104252 74 ntBASIC0.67□□□□□ -2.3
Sdc1P18828 Gm25781-201ENSMUST00000122527 84 ntBASIC0.67□□□□□ -2.3
Sdc1P18828 Gm25544-201ENSMUST00000122676 120 ntBASIC0.67□□□□□ -2.3
Sdc1P18828 Gm22228-201ENSMUST00000157364 101 ntBASIC0.67□□□□□ -2.3
Sdc1P18828 Gm22883-201ENSMUST00000157376 106 ntBASIC0.67□□□□□ -2.3
Sdc1P18828 Mir1951-201ENSMUST00000157981 89 ntBASIC0.67□□□□□ -2.3
Sdc1P18828 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Sdc1P18828 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.67□□□□□ -2.3
Sdc1P18828 Gm28489-201ENSMUST00000186655 316 ntBASIC0.67□□□□□ -2.3
Sdc1P18828 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.67□□□□□ -2.3
Sdc1P18828 Gm25929-201ENSMUST00000082784 107 ntBASIC0.67□□□□□ -2.3
Sdc1P18828 Gm25204-201ENSMUST00000082843 106 ntBASIC0.67□□□□□ -2.3
Sdc1P18828 Gm24042-201ENSMUST00000083114 103 ntBASIC0.67□□□□□ -2.3
Sdc1P18828 Mir33-201ENSMUST00000083531 69 ntBASIC0.67□□□□□ -2.3
Sdc1P18828 Mir34a-201ENSMUST00000083559 102 ntBASIC0.67□□□□□ -2.3
Sdc1P18828 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Sdc1P18828 Gm26338-201ENSMUST00000102372 110 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Gm42606-201ENSMUST00000114209 239 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Gm25773-201ENSMUST00000116718 127 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Gm14568-201ENSMUST00000119321 294 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Gm13518-201ENSMUST00000120018 233 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Gm14761-201ENSMUST00000121363 262 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Gm25970-201ENSMUST00000157165 86 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Gm20391-201ENSMUST00000174722 106 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Gm25450-201ENSMUST00000179144 107 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Gm27587-201ENSMUST00000185116 163 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Gm29490-201ENSMUST00000190923 342 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Mir3087-201ENSMUST00000199405 56 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Gm44149-201ENSMUST00000204256 226 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.66□□□□□ -2.3
Sdc1P18828 Gm14775-201ENSMUST00000122089 310 ntBASIC0.65□□□□□ -2.31
Sdc1P18828 Gm23636-201ENSMUST00000175070 95 ntBASIC0.65□□□□□ -2.31
Sdc1P18828 Gm23267-201ENSMUST00000178490 132 ntBASIC0.65□□□□□ -2.31
Sdc1P18828 Gm27326-201ENSMUST00000183504 95 ntBASIC0.65□□□□□ -2.31
Sdc1P18828 Mir376a-201ENSMUST00000197584 68 ntBASIC0.65□□□□□ -2.31
Sdc1P18828 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.65□□□□□ -2.31
Sdc1P18828 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.65□□□□□ -2.31
Sdc1P18828 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.65□□□□□ -2.31
Sdc1P18828 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.65□□□□□ -2.31
Sdc1P18828 Gm25079-201ENSMUST00000082529 203 ntBASIC0.65□□□□□ -2.31
Sdc1P18828 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Sdc1P18828 Gm22365-201ENSMUST00000093750 117 ntBASIC0.65□□□□□ -2.31
Sdc1P18828 Gm23492-201ENSMUST00000116837 115 ntBASIC0.64□□□□□ -2.31
Sdc1P18828 Gm11835-201ENSMUST00000120635 663 ntBASIC0.64□□□□□ -2.31
Sdc1P18828 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.64□□□□□ -2.31
Sdc1P18828 Gm24498-201ENSMUST00000158445 102 ntBASIC0.64□□□□□ -2.31
Sdc1P18828 Gm25768-201ENSMUST00000158570 98 ntBASIC0.64□□□□□ -2.31
Sdc1P18828 Gm22888-201ENSMUST00000158640 77 ntBASIC0.64□□□□□ -2.31
Sdc1P18828 Gm23182-201ENSMUST00000158688 135 ntBASIC0.64□□□□□ -2.31
Sdc1P18828 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Sdc1P18828 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
Sdc1P18828 Gm14536-201ENSMUST00000118324 138 ntBASIC0.63□□□□□ -2.31
Sdc1P18828 Gm15027-201ENSMUST00000120922 138 ntBASIC0.63□□□□□ -2.31
Sdc1P18828 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.63□□□□□ -2.31
Sdc1P18828 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Sdc1P18828 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Sdc1P18828 Gm27365-201ENSMUST00000184041 177 ntBASIC0.63□□□□□ -2.31
Sdc1P18828 Mir7665-201ENSMUST00000184907 63 ntBASIC0.63□□□□□ -2.31
Sdc1P18828 Gm28927-201ENSMUST00000191528 272 ntBASIC0.63□□□□□ -2.31
Sdc1P18828 Gm6105-201ENSMUST00000200580 624 ntBASIC0.63□□□□□ -2.31
Sdc1P18828 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.63□□□□□ -2.31
Sdc1P18828 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.63□□□□□ -2.31
Sdc1P18828 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.63□□□□□ -2.31
Sdc1P18828 Gm22248-201ENSMUST00000082482 150 ntBASIC0.63□□□□□ -2.31
Sdc1P18828 Gm26107-201ENSMUST00000083972 107 ntBASIC0.63□□□□□ -2.31
Sdc1P18828 Gm13560-201ENSMUST00000121865 329 ntBASIC0.62□□□□□ -2.31
Sdc1P18828 Gm24595-201ENSMUST00000122501 110 ntBASIC0.62□□□□□ -2.31
Sdc1P18828 Gm25783-201ENSMUST00000122525 190 ntBASIC0.62□□□□□ -2.31
Sdc1P18828 Gm24847-201ENSMUST00000158032 108 ntBASIC0.62□□□□□ -2.31
Sdc1P18828 Gm23474-201ENSMUST00000158884 75 ntBASIC0.62□□□□□ -2.31
Sdc1P18828 Gm23793-201ENSMUST00000179396 117 ntBASIC0.62□□□□□ -2.31
Sdc1P18828 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.62□□□□□ -2.31
Sdc1P18828 Gm23735-201ENSMUST00000082551 134 ntBASIC0.62□□□□□ -2.31
Sdc1P18828 Gm24630-201ENSMUST00000122768 106 ntBASIC0.61□□□□□ -2.31
Sdc1P18828 Gm23329-201ENSMUST00000157415 108 ntBASIC0.61□□□□□ -2.31
Sdc1P18828 Gm25982-201ENSMUST00000157920 101 ntBASIC0.61□□□□□ -2.31
Sdc1P18828 Gm26358-201ENSMUST00000158215 97 ntBASIC0.61□□□□□ -2.31
Sdc1P18828 Gm23967-201ENSMUST00000175062 78 ntBASIC0.61□□□□□ -2.31
Sdc1P18828 Gm20630-201ENSMUST00000177387 551 ntBASIC0.61□□□□□ -2.31
Sdc1P18828 Gm28330-201ENSMUST00000190353 171 ntBASIC0.61□□□□□ -2.31
Sdc1P18828 Gm44352-201ENSMUST00000196358 110 ntBASIC0.61□□□□□ -2.31
Sdc1P18828 Gm34783-201ENSMUST00000209159 303 ntBASIC0.61□□□□□ -2.31
Sdc1P18828 Gm46993-201ENSMUST00000220708 259 ntBASIC0.61□□□□□ -2.31
Sdc1P18828 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.61□□□□□ -2.31
Sdc1P18828 Mir362-201ENSMUST00000093592 65 ntBASIC0.61□□□□□ -2.31
Sdc1P18828 Mir654-201ENSMUST00000104787 84 ntBASIC0.6□□□□□ -2.31
Sdc1P18828 Mir880-201ENSMUST00000104809 78 ntBASIC0.6□□□□□ -2.31
Sdc1P18828 Gm14298-201ENSMUST00000139032 237 ntBASIC0.6□□□□□ -2.31
Sdc1P18828 Gm16356-201ENSMUST00000143300 169 ntBASIC0.6□□□□□ -2.31
Sdc1P18828 Mir1931-201ENSMUST00000158589 119 ntBASIC0.6□□□□□ -2.31
Sdc1P18828 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.6□□□□□ -2.31
Sdc1P18828 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.6□□□□□ -2.31
Sdc1P18828 Gm24154-201ENSMUST00000175261 130 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms