Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.13□□□□□ -2.43
Col1a1P11087 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.13□□□□□ -2.43
Col1a1P11087 Gm24518-201ENSMUST00000180275 94 ntBASIC-0.13□□□□□ -2.43
Col1a1P11087 Gm26457-201ENSMUST00000082678 78 ntBASIC-0.13□□□□□ -2.43
Col1a1P11087 Gm24527-201ENSMUST00000082920 107 ntBASIC-0.13□□□□□ -2.43
Col1a1P11087 Gm25582-201ENSMUST00000083412 110 ntBASIC-0.13□□□□□ -2.43
Col1a1P11087 Mir490-201ENSMUST00000093567 84 ntBASIC-0.13□□□□□ -2.43
Col1a1P11087 Mir709-201ENSMUST00000102190 88 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm16242-201ENSMUST00000117741 334 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm11856-201ENSMUST00000118712 276 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm24596-201ENSMUST00000122504 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm24584-201ENSMUST00000157972 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm25300-201ENSMUST00000175284 84 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm25211-201ENSMUST00000177553 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm25245-201ENSMUST00000178139 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm26245-201ENSMUST00000178491 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm23610-201ENSMUST00000178659 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm25101-201ENSMUST00000179057 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm23712-201ENSMUST00000179713 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm25173-201ENSMUST00000179794 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm24870-201ENSMUST00000179897 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm22645-201ENSMUST00000180010 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm24565-201ENSMUST00000180099 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm23805-201ENSMUST00000180129 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm25327-201ENSMUST00000180263 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 AC120553.1-201ENSMUST00000227313 260 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 AC116319.1-201ENSMUST00000227765 222 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm22749-201ENSMUST00000082490 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm22747-201ENSMUST00000082495 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm22063-201ENSMUST00000082560 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm23057-201ENSMUST00000082801 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm26324-201ENSMUST00000083073 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm26127-201ENSMUST00000083193 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm25577-201ENSMUST00000083414 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Mir155-201ENSMUST00000083463 65 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm23103-201ENSMUST00000083725 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm23732-201ENSMUST00000083751 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm22352-201ENSMUST00000083917 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm24448-201ENSMUST00000083979 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm22886-201ENSMUST00000093714 107 ntBASIC-0.14□□□□□ -2.43
Col1a1P11087 Gm14296-202ENSMUST00000108931 750 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm16032-201ENSMUST00000118534 168 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm13804-201ENSMUST00000119552 172 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm11254-201ENSMUST00000122368 653 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm27510-201ENSMUST00000158214 64 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm24277-201ENSMUST00000158661 104 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm24306-201ENSMUST00000180229 79 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.15□□□□□ -2.43
Col1a1P11087 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm44010-201ENSMUST00000204432 331 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 AC157476.1-201ENSMUST00000215555 169 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 AC114916.1-201ENSMUST00000228465 494 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm24623-201ENSMUST00000082616 194 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm25627-201ENSMUST00000084003 153 ntBASIC-0.15□□□□□ -2.43
Col1a1P11087 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.16□□□□□ -2.43
Col1a1P11087 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.16□□□□□ -2.43
Col1a1P11087 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.16□□□□□ -2.43
Col1a1P11087 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.16□□□□□ -2.43
Col1a1P11087 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.16□□□□□ -2.43
Col1a1P11087 Snord85-201ENSMUST00000083262 73 ntBASIC-0.16□□□□□ -2.43
Col1a1P11087 Gm24163-201ENSMUST00000093660 132 ntBASIC-0.16□□□□□ -2.43
Col1a1P11087 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC-0.16□□□□□ -2.43
Col1a1P11087 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.43
Col1a1P11087 Snord89-201ENSMUST00000104516 110 ntBASIC-0.16□□□□□ -2.44
Col1a1P11087 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.16□□□□□ -2.44
Col1a1P11087 Gm23996-201ENSMUST00000158062 131 ntBASIC-0.16□□□□□ -2.44
Col1a1P11087 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.16□□□□□ -2.44
Col1a1P11087 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.16□□□□□ -2.44
Col1a1P11087 Gm25670-201ENSMUST00000178423 107 ntBASIC-0.16□□□□□ -2.44
Col1a1P11087 Gm26239-201ENSMUST00000178842 107 ntBASIC-0.16□□□□□ -2.44
Col1a1P11087 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC-0.16□□□□□ -2.44
Col1a1P11087 Gm26228-201ENSMUST00000082512 107 ntBASIC-0.16□□□□□ -2.44
Col1a1P11087 Gm24292-201ENSMUST00000082888 107 ntBASIC-0.16□□□□□ -2.44
Col1a1P11087 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.16□□□□□ -2.44
Col1a1P11087 Mir30a-201ENSMUST00000083471 71 ntBASIC-0.16□□□□□ -2.44
Col1a1P11087 Gm25518-201ENSMUST00000083864 107 ntBASIC-0.16□□□□□ -2.44
Col1a1P11087 Gm14803-201ENSMUST00000117163 361 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 Gm25054-201ENSMUST00000157370 97 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 Gm22186-201ENSMUST00000157822 122 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 Gm22328-201ENSMUST00000158074 112 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 Gm17148-201ENSMUST00000164702 249 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 Gm22308-201ENSMUST00000177609 107 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 Gm23568-201ENSMUST00000177960 92 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 Gm24829-201ENSMUST00000179245 92 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 Gm27793-201ENSMUST00000183405 76 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 Gm37918-201ENSMUST00000192071 120 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 AC116465.1-201ENSMUST00000220324 235 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 Gm24616-201ENSMUST00000083274 139 ntBASIC-0.17□□□□□ -2.44
Col1a1P11087 Mir654-201ENSMUST00000104787 84 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms