Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm22200-201ENSMUST00000158614 67 ntBASIC0.06□□□□□ -2.4
TcraP01849 Gm24799-201ENSMUST00000178431 79 ntBASIC0.06□□□□□ -2.4
TcraP01849 Gm28343-201ENSMUST00000185386 112 ntBASIC0.06□□□□□ -2.4
TcraP01849 Gm5034-201ENSMUST00000199115 634 ntBASIC0.06□□□□□ -2.4
TcraP01849 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.06□□□□□ -2.4
TcraP01849 Gm44010-201ENSMUST00000204432 331 ntBASIC0.06□□□□□ -2.4
TcraP01849 Gm45658-201ENSMUST00000209197 580 ntBASIC0.06□□□□□ -2.4
TcraP01849 Mir224-201ENSMUST00000083608 82 ntBASIC0.06□□□□□ -2.4
TcraP01849 Gm22834-201ENSMUST00000102021 79 ntBASIC0.05□□□□□ -2.4
TcraP01849 Gm22469-201ENSMUST00000104118 133 ntBASIC0.05□□□□□ -2.4
TcraP01849 Gm12225-201ENSMUST00000117995 298 ntBASIC0.05□□□□□ -2.4
TcraP01849 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.05□□□□□ -2.4
TcraP01849 Gm25825-201ENSMUST00000157091 124 ntBASIC0.05□□□□□ -2.4
TcraP01849 Gm23838-201ENSMUST00000158067 162 ntBASIC0.05□□□□□ -2.4
TcraP01849 Gm25434-201ENSMUST00000158278 167 ntBASIC0.05□□□□□ -2.4
TcraP01849 Mir3108-201ENSMUST00000175500 79 ntBASIC0.05□□□□□ -2.4
TcraP01849 Gm22166-201ENSMUST00000178419 121 ntBASIC0.05□□□□□ -2.4
TcraP01849 Gm23288-201ENSMUST00000179213 121 ntBASIC0.05□□□□□ -2.4
TcraP01849 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.05□□□□□ -2.4
TcraP01849 Gm29640-201ENSMUST00000187972 278 ntBASIC0.05□□□□□ -2.4
TcraP01849 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
TcraP01849 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.05□□□□□ -2.4
TcraP01849 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.05□□□□□ -2.4
TcraP01849 Gm23515-201ENSMUST00000082829 107 ntBASIC0.05□□□□□ -2.4
TcraP01849 Gm16032-201ENSMUST00000118534 168 ntBASIC0.04□□□□□ -2.4
TcraP01849 Gm11798-201ENSMUST00000119150 421 ntBASIC0.04□□□□□ -2.4
TcraP01849 Gm23761-201ENSMUST00000158347 104 ntBASIC0.04□□□□□ -2.4
TcraP01849 Gm23024-201ENSMUST00000158770 292 ntBASIC0.04□□□□□ -2.4
TcraP01849 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.04□□□□□ -2.4
TcraP01849 Gm25952-201ENSMUST00000175329 74 ntBASIC0.04□□□□□ -2.4
TcraP01849 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.04□□□□□ -2.4
TcraP01849 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.04□□□□□ -2.4
TcraP01849 Gm22685-201ENSMUST00000082848 106 ntBASIC0.04□□□□□ -2.4
TcraP01849 Gm24616-201ENSMUST00000083274 139 ntBASIC0.04□□□□□ -2.4
TcraP01849 Mir880-201ENSMUST00000104809 78 ntBASIC0.03□□□□□ -2.4
TcraP01849 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.03□□□□□ -2.4
TcraP01849 Snord98-201ENSMUST00000116819 65 ntBASIC0.03□□□□□ -2.4
TcraP01849 Gm24015-201ENSMUST00000157725 232 ntBASIC0.03□□□□□ -2.4
TcraP01849 Gm23853-201ENSMUST00000158375 104 ntBASIC0.03□□□□□ -2.4
TcraP01849 Gm24500-201ENSMUST00000158447 124 ntBASIC0.03□□□□□ -2.4
TcraP01849 Gm25163-201ENSMUST00000158905 104 ntBASIC0.03□□□□□ -2.4
TcraP01849 Gm22239-201ENSMUST00000175220 103 ntBASIC0.03□□□□□ -2.4
TcraP01849 Gm23416-201ENSMUST00000175520 95 ntBASIC0.03□□□□□ -2.4
TcraP01849 Mir7077-201ENSMUST00000183991 57 ntBASIC0.03□□□□□ -2.4
TcraP01849 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.03□□□□□ -2.4
TcraP01849 Gm5001-201ENSMUST00000204361 331 ntBASIC0.03□□□□□ -2.4
TcraP01849 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.03□□□□□ -2.4
TcraP01849 Gm8219-201ENSMUST00000218309 242 ntBASIC0.03□□□□□ -2.4
TcraP01849 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC0.03□□□□□ -2.4
TcraP01849 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.03□□□□□ -2.4
TcraP01849 Mir34a-201ENSMUST00000083559 102 ntBASIC0.03□□□□□ -2.4
TcraP01849 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
TcraP01849 Gm14536-201ENSMUST00000118324 138 ntBASIC0.02□□□□□ -2.41
TcraP01849 Gm15027-201ENSMUST00000120922 138 ntBASIC0.02□□□□□ -2.41
TcraP01849 Scarna8-201ENSMUST00000158333 131 ntBASIC0.02□□□□□ -2.41
TcraP01849 Gm22945-201ENSMUST00000158557 157 ntBASIC0.02□□□□□ -2.41
TcraP01849 Gm25718-201ENSMUST00000158632 118 ntBASIC0.02□□□□□ -2.41
TcraP01849 Gm25838-201ENSMUST00000158920 120 ntBASIC0.02□□□□□ -2.41
TcraP01849 Gm24487-201ENSMUST00000178017 63 ntBASIC0.02□□□□□ -2.41
TcraP01849 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
TcraP01849 Gm28438-201ENSMUST00000188299 345 ntBASIC0.02□□□□□ -2.41
TcraP01849 Gm29014-201ENSMUST00000191422 326 ntBASIC0.02□□□□□ -2.41
TcraP01849 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
TcraP01849 Gm25859-201ENSMUST00000083710 91 ntBASIC0.02□□□□□ -2.41
TcraP01849 Gm23041-201ENSMUST00000083868 106 ntBASIC0.02□□□□□ -2.41
TcraP01849 Gm24283-201ENSMUST00000104233 107 ntBASIC0.01□□□□□ -2.41
TcraP01849 Gm23126-201ENSMUST00000104260 134 ntBASIC0.01□□□□□ -2.41
TcraP01849 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
TcraP01849 Gm22520-201ENSMUST00000158269 129 ntBASIC0.01□□□□□ -2.41
TcraP01849 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
TcraP01849 Gm26430-201ENSMUST00000178054 107 ntBASIC0.01□□□□□ -2.41
TcraP01849 Gm27402-201ENSMUST00000183890 120 ntBASIC0.01□□□□□ -2.41
TcraP01849 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.01□□□□□ -2.41
TcraP01849 Gm18296-201ENSMUST00000192475 783 ntBASIC0.01□□□□□ -2.41
TcraP01849 Gm25586-201ENSMUST00000082499 112 ntBASIC0.01□□□□□ -2.41
TcraP01849 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.01□□□□□ -2.41
TcraP01849 Gm23851-201ENSMUST00000083831 103 ntBASIC0.01□□□□□ -2.41
TcraP01849 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
TcraP01849 Gm23013-201ENSMUST00000104146 106 ntBASIC0□□□□□ -2.41
TcraP01849 Gm25416-201ENSMUST00000104221 107 ntBASIC0□□□□□ -2.41
TcraP01849 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0□□□□□ -2.41
TcraP01849 Gm14400-201ENSMUST00000117234 2135 ntBASIC0□□□□□ -2.41
TcraP01849 Gm24962-201ENSMUST00000157917 109 ntBASIC0□□□□□ -2.41
TcraP01849 Gm23821-201ENSMUST00000158738 106 ntBASIC0□□□□□ -2.41
TcraP01849 Gm44052-201ENSMUST00000203382 396 ntBASIC0□□□□□ -2.41
TcraP01849 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
TcraP01849 Mir709-201ENSMUST00000102190 88 ntBASIC-0.01□□□□□ -2.41
TcraP01849 Gm15289-201ENSMUST00000117793 244 ntBASIC-0.01□□□□□ -2.41
TcraP01849 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC-0.01□□□□□ -2.41
TcraP01849 Gm22818-201ENSMUST00000157446 104 ntBASIC-0.01□□□□□ -2.41
TcraP01849 Gm23584-201ENSMUST00000157655 129 ntBASIC-0.01□□□□□ -2.41
TcraP01849 AC136457.1-201ENSMUST00000224195 156 ntBASIC-0.01□□□□□ -2.41
TcraP01849 Gm24042-201ENSMUST00000083114 103 ntBASIC-0.01□□□□□ -2.41
TcraP01849 Rny1-201ENSMUST00000083767 112 ntBASIC-0.01□□□□□ -2.41
TcraP01849 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
TcraP01849 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
TcraP01849 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
TcraP01849 n-R5s6-201ENSMUST00000122663 88 ntBASIC-0.02□□□□□ -2.41
TcraP01849 Gm26274-201ENSMUST00000157103 321 ntBASIC-0.02□□□□□ -2.41
TcraP01849 Gm24901-201ENSMUST00000158125 110 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms