Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.23□□□□□ -2.21
Cldn1O88551 Gm26339-201ENSMUST00000102368 99 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Mir653-201ENSMUST00000102402 85 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Mir767-201ENSMUST00000103256 107 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Gm24283-201ENSMUST00000104233 107 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Gm15002-201ENSMUST00000118406 452 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Gm23656-201ENSMUST00000122626 112 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Gm22216-201ENSMUST00000157557 114 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Gm25371-201ENSMUST00000158162 101 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.22□□□□□ -2.21
Cldn1O88551 Gm28330-201ENSMUST00000190353 171 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Gm44458-201ENSMUST00000196594 143 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Gm19572-201ENSMUST00000214326 338 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Cldn1O88551 Gm16976-205ENSMUST00000227324 226 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Snora3-201ENSMUST00000083082 132 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Mir221-201ENSMUST00000083488 95 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.22□□□□□ -2.21
Cldn1O88551 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Gm23492-201ENSMUST00000116837 115 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Gm13967-201ENSMUST00000120404 380 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Gm14491-201ENSMUST00000121919 199 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Gm24895-201ENSMUST00000122742 74 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Gm22883-201ENSMUST00000157376 106 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Gm25914-201ENSMUST00000157618 153 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Snord13-201ENSMUST00000157627 104 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Gm23636-201ENSMUST00000175070 95 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Gm28849-201ENSMUST00000188127 174 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Gm23370-201ENSMUST00000199545 130 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Gm23055-201ENSMUST00000082805 94 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Mir196b-201ENSMUST00000083509 85 ntBASIC1.21□□□□□ -2.22
Cldn1O88551 Gm14922-201ENSMUST00000121131 163 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 Gm27723-201ENSMUST00000157398 63 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 Gm24277-201ENSMUST00000158661 104 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 Gm24174-201ENSMUST00000158933 111 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 Gm22565-201ENSMUST00000175540 69 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Cldn1O88551 Gm28912-201ENSMUST00000189001 234 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 Gm44373-201ENSMUST00000196112 169 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.2□□□□□ -2.22
Cldn1O88551 Gm18188-201ENSMUST00000219386 478 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 Gm23406-201ENSMUST00000082537 122 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 Gm25930-201ENSMUST00000082785 107 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 Mir155-201ENSMUST00000083463 65 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 Gm25513-201ENSMUST00000083861 162 ntBASIC1.2□□□□□ -2.22
Cldn1O88551 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Cldn1O88551 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.19□□□□□ -2.22
Cldn1O88551 Gm22780-201ENSMUST00000104084 132 ntBASIC1.19□□□□□ -2.22
Cldn1O88551 Gm23208-201ENSMUST00000158666 127 ntBASIC1.19□□□□□ -2.22
Cldn1O88551 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.19□□□□□ -2.22
Cldn1O88551 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.19□□□□□ -2.22
Cldn1O88551 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.19□□□□□ -2.22
Cldn1O88551 Gm10092-201ENSMUST00000077110 180 ntBASIC1.19□□□□□ -2.22
Cldn1O88551 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Cldn1O88551 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Cldn1O88551 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Cldn1O88551 Gm15379-201ENSMUST00000121224 648 ntBASIC1.18□□□□□ -2.22
Cldn1O88551 Gm15213-201ENSMUST00000122098 216 ntBASIC1.18□□□□□ -2.22
Cldn1O88551 Gm22279-201ENSMUST00000157200 93 ntBASIC1.18□□□□□ -2.22
Cldn1O88551 Gm23083-201ENSMUST00000157851 116 ntBASIC1.18□□□□□ -2.22
Cldn1O88551 Gm24847-201ENSMUST00000158032 108 ntBASIC1.18□□□□□ -2.22
Cldn1O88551 Gm22862-201ENSMUST00000178593 121 ntBASIC1.18□□□□□ -2.22
Cldn1O88551 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Cldn1O88551 Gm19777-201ENSMUST00000191940 358 ntBASIC1.18□□□□□ -2.22
Cldn1O88551 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.18□□□□□ -2.22
Cldn1O88551 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.18□□□□□ -2.22
Cldn1O88551 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.18□□□□□ -2.22
Cldn1O88551 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Mir293-201ENSMUST00000104841 80 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Gm14923-201ENSMUST00000118270 155 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Gm23640-201ENSMUST00000157860 104 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Gm17113-201ENSMUST00000170118 171 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Gm22929-201ENSMUST00000175517 107 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Gm42774-201ENSMUST00000198854 283 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Gm42594-201ENSMUST00000199511 246 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Gm45005-201ENSMUST00000206640 157 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Gm19855-201ENSMUST00000210145 249 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Snord14a-201ENSMUST00000082807 87 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Gm24164-201ENSMUST00000093663 104 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Cldn1O88551 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Cldn1O88551 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Cldn1O88551 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.17□□□□□ -2.22
Cldn1O88551 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
Cldn1O88551 Gm25495-201ENSMUST00000104431 131 ntBASIC1.16□□□□□ -2.22
Cldn1O88551 Gm23836-201ENSMUST00000104434 129 ntBASIC1.16□□□□□ -2.22
Cldn1O88551 Gm23907-201ENSMUST00000104595 189 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms