Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Mir758-201ENSMUST00000103260 81 ntBASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Gm16032-201ENSMUST00000118534 168 ntBASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Gm15162-201ENSMUST00000119325 283 ntBASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Gm11204-201ENSMUST00000122438 147 ntBASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Gm24594-201ENSMUST00000122502 99 ntBASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Gm23208-201ENSMUST00000158666 127 ntBASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Mir6336-201ENSMUST00000183581 130 ntBASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Gm29022-201ENSMUST00000190702 225 ntBASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Gm43563-201ENSMUST00000196761 198 ntBASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Gm24453-201ENSMUST00000083346 76 ntBASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Trav13d-3J3QMG8 Mir669g-201ENSMUST00000116809 123 ntBASIC1.48□□□□□ -2.17
Trav13d-3J3QMG8 Gm13801-201ENSMUST00000120750 160 ntBASIC1.48□□□□□ -2.17
Trav13d-3J3QMG8 Gm24595-201ENSMUST00000122501 110 ntBASIC1.48□□□□□ -2.17
Trav13d-3J3QMG8 Gm22803-201ENSMUST00000158049 283 ntBASIC1.48□□□□□ -2.17
Trav13d-3J3QMG8 Mir6352-201ENSMUST00000184495 116 ntBASIC1.48□□□□□ -2.17
Trav13d-3J3QMG8 Gm34139-201ENSMUST00000196166 294 ntBASIC1.48□□□□□ -2.17
Trav13d-3J3QMG8 Gm44353-201ENSMUST00000200618 138 ntBASIC1.48□□□□□ -2.17
Trav13d-3J3QMG8 Gm44563-201ENSMUST00000207958 178 ntBASIC1.48□□□□□ -2.17
Trav13d-3J3QMG8 Gm14674-201ENSMUST00000117816 342 ntBASIC1.47□□□□□ -2.17
Trav13d-3J3QMG8 Gm25884-201ENSMUST00000157782 62 ntBASIC1.47□□□□□ -2.17
Trav13d-3J3QMG8 Mir6375-201ENSMUST00000197176 95 ntBASIC1.47□□□□□ -2.17
Trav13d-3J3QMG8 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.47□□□□□ -2.17
Trav13d-3J3QMG8 Gm44384-201ENSMUST00000200208 114 ntBASIC1.47□□□□□ -2.17
Trav13d-3J3QMG8 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.47□□□□□ -2.17
Trav13d-3J3QMG8 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.47□□□□□ -2.17
Trav13d-3J3QMG8 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.47□□□□□ -2.17
Trav13d-3J3QMG8 Mir221-201ENSMUST00000083488 95 ntBASIC1.47□□□□□ -2.17
Trav13d-3J3QMG8 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.46□□□□□ -2.18
Trav13d-3J3QMG8 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.46□□□□□ -2.18
Trav13d-3J3QMG8 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trav13d-3J3QMG8 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
Trav13d-3J3QMG8 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.46□□□□□ -2.18
Trav13d-3J3QMG8 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trav13d-3J3QMG8 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.45□□□□□ -2.18
Trav13d-3J3QMG8 Gm24366-201ENSMUST00000175383 86 ntBASIC1.45□□□□□ -2.18
Trav13d-3J3QMG8 Mir6406-201ENSMUST00000183592 120 ntBASIC1.45□□□□□ -2.18
Trav13d-3J3QMG8 Mir6995-201ENSMUST00000183658 71 ntBASIC1.45□□□□□ -2.18
Trav13d-3J3QMG8 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.45□□□□□ -2.18
Trav13d-3J3QMG8 Gm43512-201ENSMUST00000198495 176 ntBASIC1.45□□□□□ -2.18
Trav13d-3J3QMG8 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.45□□□□□ -2.18
Trav13d-3J3QMG8 Rny1-201ENSMUST00000083767 112 ntBASIC1.45□□□□□ -2.18
Trav13d-3J3QMG8 Mir3096-201ENSMUST00000116685 71 ntBASIC1.44□□□□□ -2.18
Trav13d-3J3QMG8 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.44□□□□□ -2.18
Trav13d-3J3QMG8 Gm22082-201ENSMUST00000157587 161 ntBASIC1.44□□□□□ -2.18
Trav13d-3J3QMG8 Gm25423-201ENSMUST00000157609 107 ntBASIC1.44□□□□□ -2.18
Trav13d-3J3QMG8 Gm26181-201ENSMUST00000157687 106 ntBASIC1.44□□□□□ -2.18
Trav13d-3J3QMG8 Gm22553-201ENSMUST00000157797 295 ntBASIC1.44□□□□□ -2.18
Trav13d-3J3QMG8 Gm22665-201ENSMUST00000158720 275 ntBASIC1.44□□□□□ -2.18
Trav13d-3J3QMG8 Gm28383-201ENSMUST00000187563 139 ntBASIC1.44□□□□□ -2.18
Trav13d-3J3QMG8 Gm29262-201ENSMUST00000190084 196 ntBASIC1.44□□□□□ -2.18
Trav13d-3J3QMG8 Gm25820-202ENSMUST00000197479 128 ntBASIC1.44□□□□□ -2.18
Trav13d-3J3QMG8 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.44□□□□□ -2.18
Trav13d-3J3QMG8 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.44□□□□□ -2.18
Trav13d-3J3QMG8 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav13d-3J3QMG8 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Trav13d-3J3QMG8 Mir881-201ENSMUST00000104844 78 ntBASIC1.43□□□□□ -2.18
Trav13d-3J3QMG8 Mir873a-201ENSMUST00000104863 77 ntBASIC1.43□□□□□ -2.18
Trav13d-3J3QMG8 Gm23170-201ENSMUST00000157158 106 ntBASIC1.43□□□□□ -2.18
Trav13d-3J3QMG8 Gm25424-201ENSMUST00000157612 58 ntBASIC1.43□□□□□ -2.18
Trav13d-3J3QMG8 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav13d-3J3QMG8 Mir7026-201ENSMUST00000184384 67 ntBASIC1.43□□□□□ -2.18
Trav13d-3J3QMG8 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.43□□□□□ -2.18
Trav13d-3J3QMG8 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.43□□□□□ -2.18
Trav13d-3J3QMG8 Snord14a-201ENSMUST00000082807 87 ntBASIC1.43□□□□□ -2.18
Trav13d-3J3QMG8 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.43□□□□□ -2.18
Trav13d-3J3QMG8 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav13d-3J3QMG8 Gm24835-201ENSMUST00000116777 111 ntBASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 Gm24394-201ENSMUST00000158141 123 ntBASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 Gm22386-201ENSMUST00000158192 129 ntBASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 Gm25836-201ENSMUST00000158918 123 ntBASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 Gm25935-201ENSMUST00000178746 107 ntBASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Trav13d-3J3QMG8 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Trav13d-3J3QMG8 Gm22761-201ENSMUST00000102278 96 ntBASIC1.41□□□□□ -2.18
Trav13d-3J3QMG8 Gm23705-201ENSMUST00000104370 130 ntBASIC1.41□□□□□ -2.18
Trav13d-3J3QMG8 Gm12686-201ENSMUST00000120546 397 ntBASIC1.41□□□□□ -2.18
Trav13d-3J3QMG8 Mir1898-201ENSMUST00000122643 83 ntBASIC1.41□□□□□ -2.18
Trav13d-3J3QMG8 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.41□□□□□ -2.18
Trav13d-3J3QMG8 Gm44325-201ENSMUST00000196757 77 ntBASIC1.41□□□□□ -2.18
Trav13d-3J3QMG8 Gm33866-201ENSMUST00000196911 289 ntBASIC1.41□□□□□ -2.18
Trav13d-3J3QMG8 Gm45754-201ENSMUST00000212380 279 ntBASIC1.41□□□□□ -2.18
Trav13d-3J3QMG8 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.41□□□□□ -2.18
Trav13d-3J3QMG8 Gm26922-201ENSMUST00000082687 72 ntBASIC1.41□□□□□ -2.18
Trav13d-3J3QMG8 Gm25142-201ENSMUST00000082698 107 ntBASIC1.41□□□□□ -2.18
Trav13d-3J3QMG8 Gm24406-201ENSMUST00000083026 128 ntBASIC1.41□□□□□ -2.18
Trav13d-3J3QMG8 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trav13d-3J3QMG8 Gm25538-201ENSMUST00000101943 107 ntBASIC1.4□□□□□ -2.19
Trav13d-3J3QMG8 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 182.3 ms