Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm23118-201ENSMUST00000122657 187 ntBASIC-1□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm24288-201ENSMUST00000157630 144 ntBASIC-1□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm23180-201ENSMUST00000158686 125 ntBASIC-1□□□□□ -2.57
Trav4-3A0A0B4J1K1 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC-1□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm27884-201ENSMUST00000183865 76 ntBASIC-1□□□□□ -2.57
Trav4-3A0A0B4J1K1 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC-1□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm23442-201ENSMUST00000082919 134 ntBASIC-1□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm23690-201ENSMUST00000083036 94 ntBASIC-1□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm7916-201ENSMUST00000120325 456 ntBASIC-1.01□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm23763-201ENSMUST00000158345 60 ntBASIC-1.01□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm22838-201ENSMUST00000158437 99 ntBASIC-1.01□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm24884-201ENSMUST00000158784 119 ntBASIC-1.01□□□□□ -2.57
Trav4-3A0A0B4J1K1 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-1.01□□□□□ -2.57
Trav4-3A0A0B4J1K1 Mir7014-201ENSMUST00000183853 63 ntBASIC-1.01□□□□□ -2.57
Trav4-3A0A0B4J1K1 Mir6390-201ENSMUST00000184405 129 ntBASIC-1.01□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm19790-201ENSMUST00000214414 251 ntBASIC-1.01□□□□□ -2.57
Trav4-3A0A0B4J1K1 AC124569.1-201ENSMUST00000225932 101 ntBASIC-1.01□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm22753-201ENSMUST00000083657 107 ntBASIC-1.01□□□□□ -2.57
Trav4-3A0A0B4J1K1 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm25878-201ENSMUST00000104327 93 ntBASIC-1.02□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm12143-201ENSMUST00000119666 332 ntBASIC-1.02□□□□□ -2.57
Trav4-3A0A0B4J1K1 Spanxn4-201ENSMUST00000172433 424 ntBASIC-1.02□□□□□ -2.57
Trav4-3A0A0B4J1K1 Mir3473d-201ENSMUST00000175346 81 ntBASIC-1.02□□□□□ -2.57
Trav4-3A0A0B4J1K1 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC-1.02□□□□□ -2.57
Trav4-3A0A0B4J1K1 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC-1.02□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm28740-201ENSMUST00000186142 215 ntBASIC-1.02□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm19777-201ENSMUST00000191940 358 ntBASIC-1.02□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm24045-201ENSMUST00000083113 98 ntBASIC-1.02□□□□□ -2.57
Trav4-3A0A0B4J1K1 Mir377-201ENSMUST00000083504 68 ntBASIC-1.02□□□□□ -2.57
Trav4-3A0A0B4J1K1 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-1.02□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm22656-201ENSMUST00000104199 171 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm11386-201ENSMUST00000117761 347 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm13368-201ENSMUST00000122443 430 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm24843-201ENSMUST00000158682 76 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm25328-201ENSMUST00000175013 107 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Mir3101-201ENSMUST00000175607 88 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm25671-201ENSMUST00000178612 105 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm25935-201ENSMUST00000178746 107 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm23307-201ENSMUST00000179167 105 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm25286-201ENSMUST00000179790 105 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm29848-201ENSMUST00000203107 295 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm44232-201ENSMUST00000204537 225 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 AC173345.2-201ENSMUST00000222795 153 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 AC183092.1-201ENSMUST00000224301 153 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm22685-201ENSMUST00000082848 106 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Gm24254-201ENSMUST00000083702 104 ntBASIC-1.03□□□□□ -2.57
Trav4-3A0A0B4J1K1 Mir669f-201ENSMUST00000103850 121 ntBASIC-1.04□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm22654-201ENSMUST00000157874 105 ntBASIC-1.04□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm20689-201ENSMUST00000176033 279 ntBASIC-1.04□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm22290-201ENSMUST00000177655 107 ntBASIC-1.04□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm38364-201ENSMUST00000191814 179 ntBASIC-1.04□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC-1.04□□□□□ -2.58
Trav4-3A0A0B4J1K1 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC-1.04□□□□□ -2.58
Trav4-3A0A0B4J1K1 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-1.04□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm25403-201ENSMUST00000082971 143 ntBASIC-1.04□□□□□ -2.58
Trav4-3A0A0B4J1K1 n-R5s202-201ENSMUST00000104517 114 ntBASIC-1.05□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm23032-201ENSMUST00000157995 107 ntBASIC-1.05□□□□□ -2.58
Trav4-3A0A0B4J1K1 Mir1931-201ENSMUST00000158589 119 ntBASIC-1.05□□□□□ -2.58
Trav4-3A0A0B4J1K1 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm26430-201ENSMUST00000178054 107 ntBASIC-1.05□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm23151-201ENSMUST00000178061 107 ntBASIC-1.05□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm29014-201ENSMUST00000191422 326 ntBASIC-1.05□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm24338-201ENSMUST00000104205 127 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm16053-201ENSMUST00000120511 188 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm24593-201ENSMUST00000122507 106 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm23754-201ENSMUST00000157576 63 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm25494-201ENSMUST00000158143 100 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm25044-201ENSMUST00000158603 104 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm24862-201ENSMUST00000179103 79 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm23310-201ENSMUST00000179105 79 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm25461-201ENSMUST00000179293 79 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm25873-201ENSMUST00000180317 107 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm18185-201ENSMUST00000186725 667 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm28992-201ENSMUST00000190534 139 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Mir7661-201ENSMUST00000197023 61 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Mir721-201ENSMUST00000200230 88 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm17906-201ENSMUST00000202480 901 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm36189-201ENSMUST00000204113 523 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 AC124569.4-201ENSMUST00000223830 1220 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 AC100209.2-201ENSMUST00000224461 451 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Snora62-201ENSMUST00000082991 149 ntBASIC-1.06□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm24793-201ENSMUST00000104289 132 ntBASIC-1.07□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm22048-201ENSMUST00000104721 89 ntBASIC-1.07□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm14803-201ENSMUST00000117163 361 ntBASIC-1.07□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm2768-201ENSMUST00000121062 250 ntBASIC-1.07□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm14671-201ENSMUST00000121790 262 ntBASIC-1.07□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm27964-201ENSMUST00000185195 62 ntBASIC-1.07□□□□□ -2.58
Trav4-3A0A0B4J1K1 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC-1.07□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm44960-201ENSMUST00000207403 141 ntBASIC-1.07□□□□□ -2.58
Trav4-3A0A0B4J1K1 Snora20-201ENSMUST00000082703 128 ntBASIC-1.07□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm23301-201ENSMUST00000082713 65 ntBASIC-1.07□□□□□ -2.58
Trav4-3A0A0B4J1K1 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-1.08□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm14599-201ENSMUST00000120469 474 ntBASIC-1.08□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-1.08□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm26487-201ENSMUST00000158022 94 ntBASIC-1.08□□□□□ -2.58
Trav4-3A0A0B4J1K1 Gm24080-201ENSMUST00000175178 232 ntBASIC-1.08□□□□□ -2.58
Trav4-3A0A0B4J1K1 Mir378c-201ENSMUST00000184478 99 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 156.1 ms