Protein–RNA interactions for Protein: Q9JKU8

Lmx1a, LIM homeobox transcription factor 1-alpha, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1aQ9JKU8 Gm15214-201ENSMUST00000122155 470 ntBASIC0.91□□□□□ -2.26
Lmx1aQ9JKU8 Gm25434-201ENSMUST00000158278 167 ntBASIC0.91□□□□□ -2.26
Lmx1aQ9JKU8 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC0.91□□□□□ -2.26
Lmx1aQ9JKU8 Gm23793-201ENSMUST00000179396 117 ntBASIC0.91□□□□□ -2.26
Lmx1aQ9JKU8 Gm25284-201ENSMUST00000180345 141 ntBASIC0.91□□□□□ -2.26
Lmx1aQ9JKU8 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Lmx1aQ9JKU8 Gm37918-201ENSMUST00000192071 120 ntBASIC0.91□□□□□ -2.26
Lmx1aQ9JKU8 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.91□□□□□ -2.26
Lmx1aQ9JKU8 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC0.91□□□□□ -2.26
Lmx1aQ9JKU8 Gm25789-201ENSMUST00000083294 76 ntBASIC0.91□□□□□ -2.26
Lmx1aQ9JKU8 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Lmx1aQ9JKU8 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC0.91□□□□□ -2.26
Lmx1aQ9JKU8 Gm25827-201ENSMUST00000157089 107 ntBASIC0.9□□□□□ -2.27
Lmx1aQ9JKU8 Gm2962-201ENSMUST00000159266 336 ntBASIC0.9□□□□□ -2.27
Lmx1aQ9JKU8 Gm27587-201ENSMUST00000185116 163 ntBASIC0.9□□□□□ -2.27
Lmx1aQ9JKU8 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.9□□□□□ -2.27
Lmx1aQ9JKU8 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.9□□□□□ -2.27
Lmx1aQ9JKU8 Gm28862-201ENSMUST00000188246 163 ntBASIC0.9□□□□□ -2.27
Lmx1aQ9JKU8 Gm20257-202ENSMUST00000188643 130 ntBASIC0.9□□□□□ -2.27
Lmx1aQ9JKU8 Gm37399-201ENSMUST00000195224 416 ntBASIC0.9□□□□□ -2.27
Lmx1aQ9JKU8 Gm43250-201ENSMUST00000196536 273 ntBASIC0.9□□□□□ -2.27
Lmx1aQ9JKU8 Gm24966-201ENSMUST00000082443 79 ntBASIC0.9□□□□□ -2.27
Lmx1aQ9JKU8 Gm26329-201ENSMUST00000093723 110 ntBASIC0.9□□□□□ -2.27
Lmx1aQ9JKU8 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Lmx1aQ9JKU8 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Lmx1aQ9JKU8 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Gm22935-201ENSMUST00000103960 104 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Mir293-201ENSMUST00000104841 80 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Gm23232-201ENSMUST00000157300 105 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Gm24499-201ENSMUST00000158446 104 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Gm37089-201ENSMUST00000195616 129 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Gm34139-201ENSMUST00000196166 294 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Gm34783-201ENSMUST00000209159 303 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Gm45268-201ENSMUST00000210046 370 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Gm19855-201ENSMUST00000210145 249 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Gm24043-201ENSMUST00000083108 116 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Gm22365-201ENSMUST00000093750 117 ntBASIC0.89□□□□□ -2.27
Lmx1aQ9JKU8 Gm23142-201ENSMUST00000101848 105 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm26240-201ENSMUST00000101893 105 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm23836-201ENSMUST00000104434 129 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm13518-201ENSMUST00000120018 233 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm16358-201ENSMUST00000146046 210 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm25970-201ENSMUST00000157165 86 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm24777-201ENSMUST00000157644 107 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm22164-201ENSMUST00000158413 106 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm26400-201ENSMUST00000175012 85 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm23148-201ENSMUST00000180367 107 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm16399-201ENSMUST00000181423 219 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm28409-201ENSMUST00000187064 103 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm37713-201ENSMUST00000191746 198 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm36946-201ENSMUST00000192706 435 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Gm25258-201ENSMUST00000083049 107 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Mir32-201ENSMUST00000083610 70 ntBASIC0.88□□□□□ -2.27
Lmx1aQ9JKU8 Mir544-201ENSMUST00000103813 78 ntBASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 Gm15030-201ENSMUST00000119804 484 ntBASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 Gm22279-201ENSMUST00000157200 93 ntBASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 Mir1967-201ENSMUST00000157789 82 ntBASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 Gm23277-201ENSMUST00000157914 136 ntBASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 Gm43602-201ENSMUST00000196772 300 ntBASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 Gm43976-201ENSMUST00000203637 235 ntBASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 Gm44687-201ENSMUST00000204975 235 ntBASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 Snord96a-201ENSMUST00000082791 81 ntBASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 Gm25038-201ENSMUST00000082928 130 ntBASIC0.87□□□□□ -2.27
Lmx1aQ9JKU8 Gm42606-201ENSMUST00000114209 239 ntBASIC0.86□□□□□ -2.27
Lmx1aQ9JKU8 Gm13577-201ENSMUST00000121365 205 ntBASIC0.86□□□□□ -2.27
Lmx1aQ9JKU8 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.86□□□□□ -2.27
Lmx1aQ9JKU8 Gm23921-201ENSMUST00000175258 107 ntBASIC0.86□□□□□ -2.27
Lmx1aQ9JKU8 Mir7093-201ENSMUST00000184195 101 ntBASIC0.86□□□□□ -2.27
Lmx1aQ9JKU8 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.86□□□□□ -2.27
Lmx1aQ9JKU8 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.86□□□□□ -2.27
Lmx1aQ9JKU8 Gm28408-201ENSMUST00000191557 463 ntBASIC0.86□□□□□ -2.27
Lmx1aQ9JKU8 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.86□□□□□ -2.27
Lmx1aQ9JKU8 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.86□□□□□ -2.27
Lmx1aQ9JKU8 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.86□□□□□ -2.27
Lmx1aQ9JKU8 Gm25513-201ENSMUST00000083861 162 ntBASIC0.86□□□□□ -2.27
Lmx1aQ9JKU8 Gm24445-201ENSMUST00000083981 107 ntBASIC0.86□□□□□ -2.27
Lmx1aQ9JKU8 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 Gm14980-201ENSMUST00000121247 736 ntBASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 Gm24323-201ENSMUST00000175342 77 ntBASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 Gm23419-201ENSMUST00000175523 84 ntBASIC0.85□□□□□ -2.27
Lmx1aQ9JKU8 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms