Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm24280-201ENSMUST00000104237 134 ntBASIC2.19□□□□□ -2.06
Nkx2-4Q9EQM3 Gm14491-201ENSMUST00000121919 199 ntBASIC2.19□□□□□ -2.06
Nkx2-4Q9EQM3 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.19□□□□□ -2.06
Nkx2-4Q9EQM3 Gm22221-201ENSMUST00000157362 103 ntBASIC2.19□□□□□ -2.06
Nkx2-4Q9EQM3 Gm22217-201ENSMUST00000157556 313 ntBASIC2.19□□□□□ -2.06
Nkx2-4Q9EQM3 Gm25834-201ENSMUST00000158916 101 ntBASIC2.19□□□□□ -2.06
Nkx2-4Q9EQM3 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Nkx2-4Q9EQM3 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.19□□□□□ -2.06
Nkx2-4Q9EQM3 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Nkx2-4Q9EQM3 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Mir374b-201ENSMUST00000102314 95 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm26473-201ENSMUST00000116763 127 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm24769-201ENSMUST00000158506 129 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm25996-201ENSMUST00000175393 117 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm23267-201ENSMUST00000178490 132 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm27878-201ENSMUST00000184000 106 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Mir6352-201ENSMUST00000184495 116 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm27443-201ENSMUST00000184660 98 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm44555-201ENSMUST00000209008 148 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm45445-201ENSMUST00000209586 232 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Nkx2-4Q9EQM3 Gm25068-201ENSMUST00000103895 110 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 Gm26405-201ENSMUST00000158495 100 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 Gm20438-201ENSMUST00000174441 329 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 Gm26435-201ENSMUST00000179026 107 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 Gm27585-201ENSMUST00000183717 199 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 Gm28169-201ENSMUST00000190342 345 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 Gm45002-201ENSMUST00000208045 120 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 Gm23461-201ENSMUST00000083265 107 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.17□□□□□ -2.06
Nkx2-4Q9EQM3 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.16□□□□□ -2.06
Nkx2-4Q9EQM3 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.16□□□□□ -2.06
Nkx2-4Q9EQM3 Gm25424-201ENSMUST00000157612 58 ntBASIC2.16□□□□□ -2.06
Nkx2-4Q9EQM3 Gm26022-201ENSMUST00000158663 108 ntBASIC2.16□□□□□ -2.06
Nkx2-4Q9EQM3 Gm23182-201ENSMUST00000158688 135 ntBASIC2.16□□□□□ -2.06
Nkx2-4Q9EQM3 Gm16561-201ENSMUST00000163001 192 ntBASIC2.16□□□□□ -2.06
Nkx2-4Q9EQM3 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Nkx2-4Q9EQM3 Gm25935-201ENSMUST00000178746 107 ntBASIC2.16□□□□□ -2.06
Nkx2-4Q9EQM3 Gm24390-201ENSMUST00000179578 62 ntBASIC2.16□□□□□ -2.06
Nkx2-4Q9EQM3 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.16□□□□□ -2.06
Nkx2-4Q9EQM3 Mir3069-201ENSMUST00000198802 65 ntBASIC2.16□□□□□ -2.06
Nkx2-4Q9EQM3 Gm25204-201ENSMUST00000082843 106 ntBASIC2.16□□□□□ -2.06
Nkx2-4Q9EQM3 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
Nkx2-4Q9EQM3 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
Nkx2-4Q9EQM3 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Gm23983-201ENSMUST00000157142 114 ntBASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Gm26345-201ENSMUST00000157534 120 ntBASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Mir1951-201ENSMUST00000157981 89 ntBASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Gm24837-201ENSMUST00000158683 81 ntBASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Gm22093-201ENSMUST00000158980 111 ntBASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Gm26864-201ENSMUST00000181346 156 ntBASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Gm43722-201ENSMUST00000196054 124 ntBASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Gm43626-201ENSMUST00000198575 162 ntBASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Gm45791-201ENSMUST00000212908 352 ntBASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Gm22683-201ENSMUST00000082854 137 ntBASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Mir146-201ENSMUST00000083667 65 ntBASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Nkx2-4Q9EQM3 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.14□□□□□ -2.07
Nkx2-4Q9EQM3 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Nkx2-4Q9EQM3 Gm25832-201ENSMUST00000104140 130 ntBASIC2.14□□□□□ -2.07
Nkx2-4Q9EQM3 Mir1927-201ENSMUST00000158579 109 ntBASIC2.14□□□□□ -2.07
Nkx2-4Q9EQM3 Gm18546-201ENSMUST00000197245 676 ntBASIC2.14□□□□□ -2.07
Nkx2-4Q9EQM3 Gm45456-201ENSMUST00000210841 243 ntBASIC2.14□□□□□ -2.07
Nkx2-4Q9EQM3 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Nkx2-4Q9EQM3 Gm23249-201ENSMUST00000083369 161 ntBASIC2.14□□□□□ -2.07
Nkx2-4Q9EQM3 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Nkx2-4Q9EQM3 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.14□□□□□ -2.07
Nkx2-4Q9EQM3 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.13□□□□□ -2.07
Nkx2-4Q9EQM3 Gm23584-201ENSMUST00000157655 129 ntBASIC2.13□□□□□ -2.07
Nkx2-4Q9EQM3 Gm22731-201ENSMUST00000158086 94 ntBASIC2.13□□□□□ -2.07
Nkx2-4Q9EQM3 Gm24900-201ENSMUST00000158128 134 ntBASIC2.13□□□□□ -2.07
Nkx2-4Q9EQM3 Gm24510-201ENSMUST00000174965 94 ntBASIC2.13□□□□□ -2.07
Nkx2-4Q9EQM3 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.13□□□□□ -2.07
Nkx2-4Q9EQM3 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.13□□□□□ -2.07
Nkx2-4Q9EQM3 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.13□□□□□ -2.07
Nkx2-4Q9EQM3 Snord72-201ENSMUST00000104549 81 ntBASIC2.12□□□□□ -2.07
Nkx2-4Q9EQM3 Gm13913-201ENSMUST00000121126 260 ntBASIC2.12□□□□□ -2.07
Nkx2-4Q9EQM3 Gm13797-201ENSMUST00000121792 120 ntBASIC2.12□□□□□ -2.07
Nkx2-4Q9EQM3 Gm26482-201ENSMUST00000158015 62 ntBASIC2.12□□□□□ -2.07
Nkx2-4Q9EQM3 Gm24277-201ENSMUST00000158661 104 ntBASIC2.12□□□□□ -2.07
Nkx2-4Q9EQM3 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Nkx2-4Q9EQM3 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.12□□□□□ -2.07
Nkx2-4Q9EQM3 Mir6901-201ENSMUST00000185062 62 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms