Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm33962-201ENSMUST00000182643 2592 ntBASIC3.12□□□□□ -1.91
Clp1Q99LI9 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Clp1Q99LI9 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.12□□□□□ -1.91
Clp1Q99LI9 Gm23260-201ENSMUST00000158317 172 ntBASIC3.12□□□□□ -1.91
Clp1Q99LI9 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC3.12□□□□□ -1.91
Clp1Q99LI9 AF357341-201ENSMUST00000083088 75 ntBASIC3.12□□□□□ -1.91
Clp1Q99LI9 Gm22738-201ENSMUST00000083440 147 ntBASIC3.12□□□□□ -1.91
Clp1Q99LI9 AL645643.1-201ENSMUST00000222438 3897 ntBASIC3.12□□□□□ -1.91
Clp1Q99LI9 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Clp1Q99LI9 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.11□□□□□ -1.91
Clp1Q99LI9 Gm24141-201ENSMUST00000122776 115 ntBASIC3.11□□□□□ -1.91
Clp1Q99LI9 Gm2830-201ENSMUST00000140330 385 ntBASIC3.11□□□□□ -1.91
Clp1Q99LI9 Gm25153-201ENSMUST00000157118 156 ntBASIC3.11□□□□□ -1.91
Clp1Q99LI9 Gm24681-201ENSMUST00000158760 107 ntBASIC3.11□□□□□ -1.91
Clp1Q99LI9 Mir3106-201ENSMUST00000175401 82 ntBASIC3.11□□□□□ -1.91
Clp1Q99LI9 Gm9251-201ENSMUST00000197202 628 ntBASIC3.11□□□□□ -1.91
Clp1Q99LI9 AC098718.1-201ENSMUST00000226166 175 ntBASIC3.11□□□□□ -1.91
Clp1Q99LI9 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Clp1Q99LI9 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Clp1Q99LI9 Snord90-201ENSMUST00000104568 111 ntBASIC3.1□□□□□ -1.91
Clp1Q99LI9 Gm27672-201ENSMUST00000183751 204 ntBASIC3.1□□□□□ -1.91
Clp1Q99LI9 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Clp1Q99LI9 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.1□□□□□ -1.91
Clp1Q99LI9 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.1□□□□□ -1.91
Clp1Q99LI9 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC3.1□□□□□ -1.91
Clp1Q99LI9 AC168056.1-201ENSMUST00000225270 180 ntBASIC3.1□□□□□ -1.91
Clp1Q99LI9 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Clp1Q99LI9 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.1□□□□□ -1.91
Clp1Q99LI9 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Clp1Q99LI9 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Clp1Q99LI9 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Clp1Q99LI9 Gm23128-201ENSMUST00000104257 132 ntBASIC3.09□□□□□ -1.91
Clp1Q99LI9 Gm24375-201ENSMUST00000104397 132 ntBASIC3.09□□□□□ -1.91
Clp1Q99LI9 Gm14567-201ENSMUST00000117155 174 ntBASIC3.09□□□□□ -1.91
Clp1Q99LI9 DQ267100-201ENSMUST00000122600 72 ntBASIC3.09□□□□□ -1.91
Clp1Q99LI9 Gm22966-201ENSMUST00000157957 129 ntBASIC3.09□□□□□ -1.91
Clp1Q99LI9 Gm24879-201ENSMUST00000158386 143 ntBASIC3.09□□□□□ -1.91
Clp1Q99LI9 Gm24922-201ENSMUST00000158511 102 ntBASIC3.09□□□□□ -1.91
Clp1Q99LI9 Gm22946-201ENSMUST00000158558 82 ntBASIC3.09□□□□□ -1.91
Clp1Q99LI9 Gm22775-201ENSMUST00000177630 120 ntBASIC3.09□□□□□ -1.91
Clp1Q99LI9 Gm23569-201ENSMUST00000180120 120 ntBASIC3.09□□□□□ -1.91
Clp1Q99LI9 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Clp1Q99LI9 Gm23128-202ENSMUST00000196578 133 ntBASIC3.09□□□□□ -1.91
Clp1Q99LI9 Gm44320-201ENSMUST00000199276 86 ntBASIC3.09□□□□□ -1.91
Clp1Q99LI9 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Clp1Q99LI9 Gm14626-201ENSMUST00000117619 216 ntBASIC3.08□□□□□ -1.92
Clp1Q99LI9 Gm27934-201ENSMUST00000158795 63 ntBASIC3.08□□□□□ -1.92
Clp1Q99LI9 Gm23963-201ENSMUST00000179603 77 ntBASIC3.08□□□□□ -1.92
Clp1Q99LI9 Gm29613-201ENSMUST00000185846 313 ntBASIC3.08□□□□□ -1.92
Clp1Q99LI9 Gm29544-201ENSMUST00000188860 313 ntBASIC3.08□□□□□ -1.92
Clp1Q99LI9 Gm28808-201ENSMUST00000190978 313 ntBASIC3.08□□□□□ -1.92
Clp1Q99LI9 Gm42960-201ENSMUST00000202160 241 ntBASIC3.08□□□□□ -1.92
Clp1Q99LI9 Gm6109-201ENSMUST00000223297 348 ntBASIC3.08□□□□□ -1.92
Clp1Q99LI9 AC127371.3-201ENSMUST00000228129 415 ntBASIC3.08□□□□□ -1.92
Clp1Q99LI9 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.08□□□□□ -1.92
Clp1Q99LI9 Gm42635-201ENSMUST00000200266 2571 ntBASIC3.08□□□□□ -1.92
Clp1Q99LI9 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Clp1Q99LI9 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.07□□□□□ -1.92
Clp1Q99LI9 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Clp1Q99LI9 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.07□□□□□ -1.92
Clp1Q99LI9 Gm23390-201ENSMUST00000157393 106 ntBASIC3.07□□□□□ -1.92
Clp1Q99LI9 Gm22500-201ENSMUST00000158982 99 ntBASIC3.07□□□□□ -1.92
Clp1Q99LI9 Gm25707-201ENSMUST00000175120 96 ntBASIC3.07□□□□□ -1.92
Clp1Q99LI9 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Clp1Q99LI9 Gm45452-201ENSMUST00000210905 177 ntBASIC3.07□□□□□ -1.92
Clp1Q99LI9 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Clp1Q99LI9 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Clp1Q99LI9 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Clp1Q99LI9 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Clp1Q99LI9 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Clp1Q99LI9 Gm15069-201ENSMUST00000117792 192 ntBASIC3.06□□□□□ -1.92
Clp1Q99LI9 Gm15068-201ENSMUST00000119796 192 ntBASIC3.06□□□□□ -1.92
Clp1Q99LI9 Gm24358-201ENSMUST00000158424 288 ntBASIC3.06□□□□□ -1.92
Clp1Q99LI9 Gm23113-201ENSMUST00000158477 99 ntBASIC3.06□□□□□ -1.92
Clp1Q99LI9 Gm44680-201ENSMUST00000208414 2910 ntBASIC3.06□□□□□ -1.92
Clp1Q99LI9 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Clp1Q99LI9 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.06□□□□□ -1.92
Clp1Q99LI9 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.06□□□□□ -1.92
Clp1Q99LI9 n-R5s183-201ENSMUST00000083939 115 ntBASIC3.06□□□□□ -1.92
Clp1Q99LI9 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.06□□□□□ -1.92
Clp1Q99LI9 Gm25485-201ENSMUST00000104120 132 ntBASIC3.05□□□□□ -1.92
Clp1Q99LI9 Gm26247-201ENSMUST00000116702 91 ntBASIC3.05□□□□□ -1.92
Clp1Q99LI9 Gm15272-201ENSMUST00000120865 233 ntBASIC3.05□□□□□ -1.92
Clp1Q99LI9 Gm22338-201ENSMUST00000157715 129 ntBASIC3.05□□□□□ -1.92
Clp1Q99LI9 Gm23044-201ENSMUST00000157891 100 ntBASIC3.05□□□□□ -1.92
Clp1Q99LI9 Mir3076-201ENSMUST00000175415 60 ntBASIC3.05□□□□□ -1.92
Clp1Q99LI9 Mir5118-201ENSMUST00000175551 67 ntBASIC3.05□□□□□ -1.92
Clp1Q99LI9 Mir7013-201ENSMUST00000183540 72 ntBASIC3.05□□□□□ -1.92
Clp1Q99LI9 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.05□□□□□ -1.92
Clp1Q99LI9 Gm44921-201ENSMUST00000205290 301 ntBASIC3.05□□□□□ -1.92
Clp1Q99LI9 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Clp1Q99LI9 Gm44578-201ENSMUST00000207236 3835 ntBASIC3.05□□□□□ -1.92
Clp1Q99LI9 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Clp1Q99LI9 Gm25466-201ENSMUST00000103995 132 ntBASIC3.04□□□□□ -1.92
Clp1Q99LI9 Gm25500-201ENSMUST00000104426 123 ntBASIC3.04□□□□□ -1.92
Clp1Q99LI9 Gm11334-201ENSMUST00000121969 156 ntBASIC3.04□□□□□ -1.92
Clp1Q99LI9 n-R5s15-201ENSMUST00000122635 111 ntBASIC3.04□□□□□ -1.92
Clp1Q99LI9 Gm25828-201ENSMUST00000157087 95 ntBASIC3.04□□□□□ -1.92
Clp1Q99LI9 Gm23325-201ENSMUST00000157422 129 ntBASIC3.04□□□□□ -1.92
Clp1Q99LI9 Mir6350-201ENSMUST00000183639 105 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms