Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm11794-201ENSMUST00000119446 237 ntBASIC0.72□□□□□ -2.29
Chrna3Q8R4G9 Gm23542-201ENSMUST00000158208 96 ntBASIC0.72□□□□□ -2.29
Chrna3Q8R4G9 Gm22435-201ENSMUST00000158552 128 ntBASIC0.72□□□□□ -2.29
Chrna3Q8R4G9 Snora24-201ENSMUST00000174989 130 ntBASIC0.72□□□□□ -2.29
Chrna3Q8R4G9 Mir3109-201ENSMUST00000175301 88 ntBASIC0.72□□□□□ -2.29
Chrna3Q8R4G9 Gm43250-201ENSMUST00000196536 273 ntBASIC0.72□□□□□ -2.29
Chrna3Q8R4G9 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.72□□□□□ -2.29
Chrna3Q8R4G9 Gm45704-201ENSMUST00000212582 403 ntBASIC0.72□□□□□ -2.29
Chrna3Q8R4G9 Gm22704-201ENSMUST00000083027 137 ntBASIC0.72□□□□□ -2.29
Chrna3Q8R4G9 Gm25579-201ENSMUST00000083407 106 ntBASIC0.72□□□□□ -2.29
Chrna3Q8R4G9 Mir33-201ENSMUST00000083531 69 ntBASIC0.72□□□□□ -2.29
Chrna3Q8R4G9 Gm24523-201ENSMUST00000083965 132 ntBASIC0.72□□□□□ -2.29
Chrna3Q8R4G9 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.72□□□□□ -2.29
Chrna3Q8R4G9 Gm14846-201ENSMUST00000121868 216 ntBASIC0.71□□□□□ -2.3
Chrna3Q8R4G9 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.71□□□□□ -2.3
Chrna3Q8R4G9 Gm25434-201ENSMUST00000158278 167 ntBASIC0.71□□□□□ -2.3
Chrna3Q8R4G9 Gm25901-201ENSMUST00000158494 130 ntBASIC0.71□□□□□ -2.3
Chrna3Q8R4G9 Gm23355-201ENSMUST00000177614 107 ntBASIC0.71□□□□□ -2.3
Chrna3Q8R4G9 Gm24487-201ENSMUST00000178017 63 ntBASIC0.71□□□□□ -2.3
Chrna3Q8R4G9 Gm44921-201ENSMUST00000205290 301 ntBASIC0.71□□□□□ -2.3
Chrna3Q8R4G9 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.71□□□□□ -2.3
Chrna3Q8R4G9 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.71□□□□□ -2.3
Chrna3Q8R4G9 Gm23721-201ENSMUST00000083005 107 ntBASIC0.71□□□□□ -2.3
Chrna3Q8R4G9 Gm26164-201ENSMUST00000083793 104 ntBASIC0.71□□□□□ -2.3
Chrna3Q8R4G9 Mir695-201ENSMUST00000102261 109 ntBASIC0.7□□□□□ -2.3
Chrna3Q8R4G9 Gm26338-201ENSMUST00000102372 110 ntBASIC0.7□□□□□ -2.3
Chrna3Q8R4G9 Gm24579-201ENSMUST00000103964 144 ntBASIC0.7□□□□□ -2.3
Chrna3Q8R4G9 Gm12433-201ENSMUST00000119659 255 ntBASIC0.7□□□□□ -2.3
Chrna3Q8R4G9 Gm15899-201ENSMUST00000128586 238 ntBASIC0.7□□□□□ -2.3
Chrna3Q8R4G9 Gm26914-201ENSMUST00000182262 223 ntBASIC0.7□□□□□ -2.3
Chrna3Q8R4G9 Mir6394-201ENSMUST00000184738 99 ntBASIC0.7□□□□□ -2.3
Chrna3Q8R4G9 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.7□□□□□ -2.3
Chrna3Q8R4G9 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.7□□□□□ -2.3
Chrna3Q8R4G9 Gm24163-201ENSMUST00000093660 132 ntBASIC0.7□□□□□ -2.3
Chrna3Q8R4G9 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.7□□□□□ -2.3
Chrna3Q8R4G9 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.69□□□□□ -2.3
Chrna3Q8R4G9 Gm14782-201ENSMUST00000120151 195 ntBASIC0.69□□□□□ -2.3
Chrna3Q8R4G9 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.69□□□□□ -2.3
Chrna3Q8R4G9 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.69□□□□□ -2.3
Chrna3Q8R4G9 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.69□□□□□ -2.3
Chrna3Q8R4G9 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.69□□□□□ -2.3
Chrna3Q8R4G9 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.69□□□□□ -2.3
Chrna3Q8R4G9 Gm22685-201ENSMUST00000082848 106 ntBASIC0.69□□□□□ -2.3
Chrna3Q8R4G9 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.69□□□□□ -2.3
Chrna3Q8R4G9 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Chrna3Q8R4G9 Gm11522-201ENSMUST00000120533 176 ntBASIC0.68□□□□□ -2.3
Chrna3Q8R4G9 Gm29490-201ENSMUST00000190923 342 ntBASIC0.68□□□□□ -2.3
Chrna3Q8R4G9 Gm18213-201ENSMUST00000207850 178 ntBASIC0.68□□□□□ -2.3
Chrna3Q8R4G9 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.67□□□□□ -2.3
Chrna3Q8R4G9 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.67□□□□□ -2.3
Chrna3Q8R4G9 Gm43898-201ENSMUST00000204456 424 ntBASIC0.67□□□□□ -2.3
Chrna3Q8R4G9 Mir10b-201ENSMUST00000083566 68 ntBASIC0.67□□□□□ -2.3
Chrna3Q8R4G9 Mir490-201ENSMUST00000093567 84 ntBASIC0.67□□□□□ -2.3
Chrna3Q8R4G9 Mir362-201ENSMUST00000093592 65 ntBASIC0.67□□□□□ -2.3
Chrna3Q8R4G9 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.66□□□□□ -2.3
Chrna3Q8R4G9 Gm11859-201ENSMUST00000118099 455 ntBASIC0.66□□□□□ -2.3
Chrna3Q8R4G9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.66□□□□□ -2.3
Chrna3Q8R4G9 Mir8116-201ENSMUST00000184134 97 ntBASIC0.66□□□□□ -2.3
Chrna3Q8R4G9 Gm29229-201ENSMUST00000188874 323 ntBASIC0.66□□□□□ -2.3
Chrna3Q8R4G9 Gm24920-201ENSMUST00000083018 85 ntBASIC0.66□□□□□ -2.3
Chrna3Q8R4G9 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.66□□□□□ -2.3
Chrna3Q8R4G9 Gm24747-201ENSMUST00000157835 87 ntBASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm18291-201ENSMUST00000190791 301 ntBASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm44458-201ENSMUST00000196594 143 ntBASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 DQ267101-201ENSMUST00000082562 73 ntBASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm24037-201ENSMUST00000082871 180 ntBASIC0.65□□□□□ -2.31
Chrna3Q8R4G9 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Gm23130-201ENSMUST00000104252 74 ntBASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Gm23991-201ENSMUST00000117033 93 ntBASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Gm23996-201ENSMUST00000158062 131 ntBASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Gm24393-201ENSMUST00000158135 97 ntBASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Cfap61-214ENSMUST00000167179 183 ntBASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Gm24323-201ENSMUST00000175342 77 ntBASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Gm25284-201ENSMUST00000180345 141 ntBASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Gm44811-201ENSMUST00000209120 228 ntBASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Gm25697-201ENSMUST00000082902 98 ntBASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Chrna3Q8R4G9 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.63□□□□□ -2.31
Chrna3Q8R4G9 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Chrna3Q8R4G9 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Chrna3Q8R4G9 Gm23203-201ENSMUST00000104374 107 ntBASIC0.63□□□□□ -2.31
Chrna3Q8R4G9 Gm22149-201ENSMUST00000104442 136 ntBASIC0.63□□□□□ -2.31
Chrna3Q8R4G9 Gm15379-201ENSMUST00000121224 648 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms