Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm45386-201ENSMUST00000210194 218 ntBASIC2.67□□□□□ -1.98
Ushbp1Q8R370 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.67□□□□□ -1.98
Ushbp1Q8R370 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ushbp1Q8R370 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm13433-201ENSMUST00000121701 240 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm22221-201ENSMUST00000157362 103 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm22989-201ENSMUST00000158313 86 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Mir6406-201ENSMUST00000183592 120 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm27991-201ENSMUST00000184804 137 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm28344-201ENSMUST00000185704 279 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm9251-201ENSMUST00000197202 628 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm44938-201ENSMUST00000208614 427 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm45791-201ENSMUST00000212908 352 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm6109-201ENSMUST00000223297 348 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm26493-201ENSMUST00000083155 136 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm25628-201ENSMUST00000084002 105 ntBASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Ushbp1Q8R370 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Ushbp1Q8R370 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.65□□□□□ -1.98
Ushbp1Q8R370 Mir374b-201ENSMUST00000102314 95 ntBASIC2.65□□□□□ -1.99
Ushbp1Q8R370 Mir344e-201ENSMUST00000104677 66 ntBASIC2.65□□□□□ -1.99
Ushbp1Q8R370 Gm13756-201ENSMUST00000117618 222 ntBASIC2.65□□□□□ -1.99
Ushbp1Q8R370 Gm25321-201ENSMUST00000122558 102 ntBASIC2.65□□□□□ -1.99
Ushbp1Q8R370 Gm26405-201ENSMUST00000158495 100 ntBASIC2.65□□□□□ -1.99
Ushbp1Q8R370 Gm22075-201ENSMUST00000158599 192 ntBASIC2.65□□□□□ -1.99
Ushbp1Q8R370 Mir669k-201ENSMUST00000177742 127 ntBASIC2.65□□□□□ -1.99
Ushbp1Q8R370 Mir466b-1-201ENSMUST00000177988 82 ntBASIC2.65□□□□□ -1.99
Ushbp1Q8R370 Gm25673-201ENSMUST00000179957 127 ntBASIC2.65□□□□□ -1.99
Ushbp1Q8R370 Gm37377-201ENSMUST00000191733 304 ntBASIC2.65□□□□□ -1.99
Ushbp1Q8R370 Mir721-201ENSMUST00000200230 88 ntBASIC2.65□□□□□ -1.99
Ushbp1Q8R370 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.65□□□□□ -1.99
Ushbp1Q8R370 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Ushbp1Q8R370 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.65□□□□□ -1.99
Ushbp1Q8R370 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Ushbp1Q8R370 Gm24049-201ENSMUST00000102409 100 ntBASIC2.64□□□□□ -1.99
Ushbp1Q8R370 Gm26018-201ENSMUST00000104406 128 ntBASIC2.64□□□□□ -1.99
Ushbp1Q8R370 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.64□□□□□ -1.99
Ushbp1Q8R370 Gm25599-201ENSMUST00000157816 103 ntBASIC2.64□□□□□ -1.99
Ushbp1Q8R370 Gm26022-201ENSMUST00000158663 108 ntBASIC2.64□□□□□ -1.99
Ushbp1Q8R370 Gm23182-201ENSMUST00000158688 135 ntBASIC2.64□□□□□ -1.99
Ushbp1Q8R370 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Ushbp1Q8R370 Mir6925-201ENSMUST00000197857 70 ntBASIC2.64□□□□□ -1.99
Ushbp1Q8R370 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.64□□□□□ -1.99
Ushbp1Q8R370 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.64□□□□□ -1.99
Ushbp1Q8R370 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.64□□□□□ -1.99
Ushbp1Q8R370 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.64□□□□□ -1.99
Ushbp1Q8R370 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Ushbp1Q8R370 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Ushbp1Q8R370 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.64□□□□□ -1.99
Ushbp1Q8R370 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Ushbp1Q8R370 Gm23324-201ENSMUST00000157421 131 ntBASIC2.63□□□□□ -1.99
Ushbp1Q8R370 Gm23101-201ENSMUST00000157550 137 ntBASIC2.63□□□□□ -1.99
Ushbp1Q8R370 Gm25223-201ENSMUST00000158200 110 ntBASIC2.63□□□□□ -1.99
Ushbp1Q8R370 Gm43722-201ENSMUST00000196054 124 ntBASIC2.63□□□□□ -1.99
Ushbp1Q8R370 Snord80-202ENSMUST00000199023 77 ntBASIC2.63□□□□□ -1.99
Ushbp1Q8R370 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.63□□□□□ -1.99
Ushbp1Q8R370 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.63□□□□□ -1.99
Ushbp1Q8R370 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.63□□□□□ -1.99
Ushbp1Q8R370 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
Ushbp1Q8R370 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Gm14588-201ENSMUST00000119895 172 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Gm25985-201ENSMUST00000122677 107 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Gm23642-201ENSMUST00000157858 258 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Mir1951-201ENSMUST00000157981 89 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Gm23033-201ENSMUST00000157996 134 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Gm23350-201ENSMUST00000158429 103 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Gm24837-201ENSMUST00000158683 81 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Gm26435-201ENSMUST00000179026 107 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Mir497-201ENSMUST00000200557 84 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Gm6105-201ENSMUST00000200580 624 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Gm24044-201ENSMUST00000083107 156 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Mir322-201ENSMUST00000083484 95 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.62□□□□□ -1.99
Ushbp1Q8R370 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.61□□□□□ -1.99
Ushbp1Q8R370 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ushbp1Q8R370 Gm22554-201ENSMUST00000157798 147 ntBASIC2.61□□□□□ -1.99
Ushbp1Q8R370 Gm22947-201ENSMUST00000158559 91 ntBASIC2.61□□□□□ -1.99
Ushbp1Q8R370 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ushbp1Q8R370 Gm27878-201ENSMUST00000184000 106 ntBASIC2.61□□□□□ -1.99
Ushbp1Q8R370 AC165138.1-201ENSMUST00000226984 270 ntBASIC2.61□□□□□ -1.99
Ushbp1Q8R370 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.61□□□□□ -1.99
Ushbp1Q8R370 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Ushbp1Q8R370 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Ushbp1Q8R370 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Ushbp1Q8R370 Gm13801-201ENSMUST00000120750 160 ntBASIC2.6□□□□□ -1.99
Ushbp1Q8R370 Gm15861-201ENSMUST00000120979 339 ntBASIC2.6□□□□□ -1.99
Ushbp1Q8R370 Gm22553-201ENSMUST00000157797 295 ntBASIC2.6□□□□□ -1.99
Ushbp1Q8R370 Gm22803-201ENSMUST00000158049 283 ntBASIC2.6□□□□□ -1.99
Ushbp1Q8R370 Gm23548-201ENSMUST00000158963 106 ntBASIC2.6□□□□□ -1.99
Ushbp1Q8R370 Mir6997-201ENSMUST00000184313 71 ntBASIC2.6□□□□□ -1.99
Ushbp1Q8R370 Gm45522-201ENSMUST00000210784 166 ntBASIC2.6□□□□□ -1.99
Ushbp1Q8R370 Mir340-201ENSMUST00000083483 98 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms