Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm26126-201ENSMUST00000083188 164 ntBASIC2.57□□□□□ -2
Vps53Q8CCB4 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Vps53Q8CCB4 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.56□□□□□ -2
Vps53Q8CCB4 Gm26105-201ENSMUST00000157253 190 ntBASIC2.56□□□□□ -2
Vps53Q8CCB4 Gm23230-201ENSMUST00000157298 133 ntBASIC2.56□□□□□ -2
Vps53Q8CCB4 Gm25914-201ENSMUST00000157618 153 ntBASIC2.56□□□□□ -2
Vps53Q8CCB4 Gm25223-201ENSMUST00000158200 110 ntBASIC2.56□□□□□ -2
Vps53Q8CCB4 Gm24573-201ENSMUST00000175499 112 ntBASIC2.56□□□□□ -2
Vps53Q8CCB4 Gm20613-201ENSMUST00000175828 345 ntBASIC2.56□□□□□ -2
Vps53Q8CCB4 Gm38183-201ENSMUST00000193189 205 ntBASIC2.56□□□□□ -2
Vps53Q8CCB4 Gm25634-201ENSMUST00000082667 105 ntBASIC2.56□□□□□ -2
Vps53Q8CCB4 Mir222-201ENSMUST00000083537 79 ntBASIC2.56□□□□□ -2
Vps53Q8CCB4 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Vps53Q8CCB4 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.56□□□□□ -2
Vps53Q8CCB4 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.55□□□□□ -2
Vps53Q8CCB4 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Vps53Q8CCB4 Gm23578-201ENSMUST00000103943 104 ntBASIC2.55□□□□□ -2
Vps53Q8CCB4 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.55□□□□□ -2
Vps53Q8CCB4 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Vps53Q8CCB4 Mir7017-201ENSMUST00000184894 62 ntBASIC2.55□□□□□ -2
Vps53Q8CCB4 Gm33866-201ENSMUST00000196911 289 ntBASIC2.55□□□□□ -2
Vps53Q8CCB4 Mir1a-2-201ENSMUST00000198520 72 ntBASIC2.55□□□□□ -2
Vps53Q8CCB4 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.55□□□□□ -2
Vps53Q8CCB4 Gm26493-201ENSMUST00000083155 136 ntBASIC2.55□□□□□ -2
Vps53Q8CCB4 Gm24453-201ENSMUST00000083346 76 ntBASIC2.55□□□□□ -2
Vps53Q8CCB4 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Vps53Q8CCB4 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.55□□□□□ -2
Vps53Q8CCB4 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Vps53Q8CCB4 Gm23670-201ENSMUST00000157469 119 ntBASIC2.54□□□□□ -2
Vps53Q8CCB4 Gm22083-201ENSMUST00000157586 102 ntBASIC2.54□□□□□ -2
Vps53Q8CCB4 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.54□□□□□ -2
Vps53Q8CCB4 Mir7217-201ENSMUST00000200304 62 ntBASIC2.54□□□□□ -2
Vps53Q8CCB4 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC2.54□□□□□ -2
Vps53Q8CCB4 Gm45791-201ENSMUST00000212908 352 ntBASIC2.54□□□□□ -2
Vps53Q8CCB4 Gm22421-201ENSMUST00000083058 107 ntBASIC2.54□□□□□ -2
Vps53Q8CCB4 Mir340-201ENSMUST00000083483 98 ntBASIC2.54□□□□□ -2
Vps53Q8CCB4 Gm22866-201ENSMUST00000083947 177 ntBASIC2.54□□□□□ -2
Vps53Q8CCB4 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Vps53Q8CCB4 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.54□□□□□ -2
Vps53Q8CCB4 Gm25538-201ENSMUST00000101943 107 ntBASIC2.53□□□□□ -2
Vps53Q8CCB4 Gm12449-201ENSMUST00000117572 234 ntBASIC2.53□□□□□ -2
Vps53Q8CCB4 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Vps53Q8CCB4 Gm16510-201ENSMUST00000153501 249 ntBASIC2.53□□□□□ -2
Vps53Q8CCB4 Gm25428-201ENSMUST00000157608 114 ntBASIC2.53□□□□□ -2
Vps53Q8CCB4 Gm23209-201ENSMUST00000158667 110 ntBASIC2.53□□□□□ -2
Vps53Q8CCB4 Gm17528-201ENSMUST00000171026 239 ntBASIC2.53□□□□□ -2
Vps53Q8CCB4 Mir7026-201ENSMUST00000184384 67 ntBASIC2.53□□□□□ -2
Vps53Q8CCB4 Mir7232-201ENSMUST00000197929 74 ntBASIC2.53□□□□□ -2
Vps53Q8CCB4 Gm44482-201ENSMUST00000199232 103 ntBASIC2.53□□□□□ -2
Vps53Q8CCB4 Gm44666-201ENSMUST00000208544 391 ntBASIC2.53□□□□□ -2
Vps53Q8CCB4 Gm25204-201ENSMUST00000082843 106 ntBASIC2.53□□□□□ -2
Vps53Q8CCB4 Mir302d-201ENSMUST00000083513 66 ntBASIC2.53□□□□□ -2
Vps53Q8CCB4 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.52□□□□□ -2.01
Vps53Q8CCB4 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.52□□□□□ -2.01
Vps53Q8CCB4 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.52□□□□□ -2.01
Vps53Q8CCB4 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Vps53Q8CCB4 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC2.52□□□□□ -2.01
Vps53Q8CCB4 Gm24598-201ENSMUST00000122510 74 ntBASIC2.52□□□□□ -2.01
Vps53Q8CCB4 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.52□□□□□ -2.01
Vps53Q8CCB4 Gm26405-201ENSMUST00000158495 100 ntBASIC2.52□□□□□ -2.01
Vps53Q8CCB4 Gm26022-201ENSMUST00000158663 108 ntBASIC2.52□□□□□ -2.01
Vps53Q8CCB4 Gm24177-201ENSMUST00000158927 131 ntBASIC2.52□□□□□ -2.01
Vps53Q8CCB4 Gm36189-201ENSMUST00000204113 523 ntBASIC2.52□□□□□ -2.01
Vps53Q8CCB4 Gm23377-201ENSMUST00000082943 126 ntBASIC2.52□□□□□ -2.01
Vps53Q8CCB4 Gm25124-201ENSMUST00000083345 164 ntBASIC2.52□□□□□ -2.01
Vps53Q8CCB4 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.52□□□□□ -2.01
Vps53Q8CCB4 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Vps53Q8CCB4 Mir374b-201ENSMUST00000102314 95 ntBASIC2.51□□□□□ -2.01
Vps53Q8CCB4 Gm15861-201ENSMUST00000120979 339 ntBASIC2.51□□□□□ -2.01
Vps53Q8CCB4 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.51□□□□□ -2.01
Vps53Q8CCB4 Mir1951-201ENSMUST00000157981 89 ntBASIC2.51□□□□□ -2.01
Vps53Q8CCB4 Gm24900-201ENSMUST00000158128 134 ntBASIC2.51□□□□□ -2.01
Vps53Q8CCB4 Gm23858-201ENSMUST00000158384 106 ntBASIC2.51□□□□□ -2.01
Vps53Q8CCB4 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.51□□□□□ -2.01
Vps53Q8CCB4 Gm24762-201ENSMUST00000083689 104 ntBASIC2.51□□□□□ -2.01
Vps53Q8CCB4 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Vps53Q8CCB4 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.51□□□□□ -2.01
Vps53Q8CCB4 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.51□□□□□ -2.01
Vps53Q8CCB4 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
Vps53Q8CCB4 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.5□□□□□ -2.01
Vps53Q8CCB4 Gm13801-201ENSMUST00000120750 160 ntBASIC2.5□□□□□ -2.01
Vps53Q8CCB4 Gm22221-201ENSMUST00000157362 103 ntBASIC2.5□□□□□ -2.01
Vps53Q8CCB4 Gm23182-201ENSMUST00000158688 135 ntBASIC2.5□□□□□ -2.01
Vps53Q8CCB4 Mir28b-201ENSMUST00000175399 80 ntBASIC2.5□□□□□ -2.01
Vps53Q8CCB4 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.5□□□□□ -2.01
Vps53Q8CCB4 Gm45116-201ENSMUST00000207392 275 ntBASIC2.5□□□□□ -2.01
Vps53Q8CCB4 Gm25142-201ENSMUST00000082698 107 ntBASIC2.5□□□□□ -2.01
Vps53Q8CCB4 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Vps53Q8CCB4 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Vps53Q8CCB4 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Vps53Q8CCB4 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Vps53Q8CCB4 Gm23324-201ENSMUST00000157421 131 ntBASIC2.49□□□□□ -2.01
Vps53Q8CCB4 Gm23101-201ENSMUST00000157550 137 ntBASIC2.49□□□□□ -2.01
Vps53Q8CCB4 Gm24015-201ENSMUST00000157725 232 ntBASIC2.49□□□□□ -2.01
Vps53Q8CCB4 Gm26482-201ENSMUST00000158015 62 ntBASIC2.49□□□□□ -2.01
Vps53Q8CCB4 Gm22159-201ENSMUST00000158412 130 ntBASIC2.49□□□□□ -2.01
Vps53Q8CCB4 Gm34139-201ENSMUST00000196166 294 ntBASIC2.49□□□□□ -2.01
Vps53Q8CCB4 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.49□□□□□ -2.01
Vps53Q8CCB4 Mir721-201ENSMUST00000200230 88 ntBASIC2.49□□□□□ -2.01
Vps53Q8CCB4 Gm5002-201ENSMUST00000207145 223 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms