Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm20613-201ENSMUST00000175828 345 ntBASIC3.6□□□□□ -1.83
Trim47Q8C0E3 Gm18486-201ENSMUST00000184040 298 ntBASIC3.6□□□□□ -1.83
Trim47Q8C0E3 Gm28282-201ENSMUST00000186072 186 ntBASIC3.6□□□□□ -1.83
Trim47Q8C0E3 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.6□□□□□ -1.83
Trim47Q8C0E3 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.6□□□□□ -1.83
Trim47Q8C0E3 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.6□□□□□ -1.83
Trim47Q8C0E3 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim47Q8C0E3 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.59□□□□□ -1.83
Trim47Q8C0E3 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.59□□□□□ -1.83
Trim47Q8C0E3 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim47Q8C0E3 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trim47Q8C0E3 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.59□□□□□ -1.83
Trim47Q8C0E3 Gm24119-201ENSMUST00000103979 246 ntBASIC3.59□□□□□ -1.83
Trim47Q8C0E3 Gm13246-201ENSMUST00000120994 315 ntBASIC3.59□□□□□ -1.83
Trim47Q8C0E3 Gm14709-201ENSMUST00000121225 304 ntBASIC3.59□□□□□ -1.83
Trim47Q8C0E3 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trim47Q8C0E3 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trim47Q8C0E3 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trim47Q8C0E3 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Trim47Q8C0E3 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Trim47Q8C0E3 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Trim47Q8C0E3 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Trim47Q8C0E3 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Snord78-201ENSMUST00000104032 66 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Gm26074-201ENSMUST00000104063 129 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Gm15190-201ENSMUST00000120855 276 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Gm22956-201ENSMUST00000122520 80 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Gm24896-201ENSMUST00000122741 135 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Gm26088-201ENSMUST00000157896 131 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Gm27783-201ENSMUST00000183534 105 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Gm37428-201ENSMUST00000193886 137 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Gm18433-202ENSMUST00000195682 196 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Gm43899-201ENSMUST00000203675 246 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 AC122327.1-201ENSMUST00000220778 108 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim47Q8C0E3 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Trim47Q8C0E3 Gm22796-201ENSMUST00000157234 106 ntBASIC3.57□□□□□ -1.84
Trim47Q8C0E3 Gm24911-201ENSMUST00000157292 136 ntBASIC3.57□□□□□ -1.84
Trim47Q8C0E3 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trim47Q8C0E3 Gm27893-201ENSMUST00000184408 194 ntBASIC3.57□□□□□ -1.84
Trim47Q8C0E3 Gm44393-201ENSMUST00000197418 138 ntBASIC3.57□□□□□ -1.84
Trim47Q8C0E3 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim47Q8C0E3 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim47Q8C0E3 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.57□□□□□ -1.84
Trim47Q8C0E3 Gm25130-201ENSMUST00000082650 156 ntBASIC3.57□□□□□ -1.84
Trim47Q8C0E3 Gm10212-201ENSMUST00000087884 324 ntBASIC3.57□□□□□ -1.84
Trim47Q8C0E3 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Trim47Q8C0E3 Gm24593-201ENSMUST00000122507 106 ntBASIC3.56□□□□□ -1.84
Trim47Q8C0E3 Gm25887-201ENSMUST00000157777 84 ntBASIC3.56□□□□□ -1.84
Trim47Q8C0E3 Gm24947-201ENSMUST00000158334 110 ntBASIC3.56□□□□□ -1.84
Trim47Q8C0E3 Gm25950-201ENSMUST00000175331 100 ntBASIC3.56□□□□□ -1.84
Trim47Q8C0E3 Gm29658-201ENSMUST00000185404 230 ntBASIC3.56□□□□□ -1.84
Trim47Q8C0E3 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.56□□□□□ -1.84
Trim47Q8C0E3 Gm26265-201ENSMUST00000083277 135 ntBASIC3.56□□□□□ -1.84
Trim47Q8C0E3 Gm23136-201ENSMUST00000083425 99 ntBASIC3.56□□□□□ -1.84
Trim47Q8C0E3 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trim47Q8C0E3 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trim47Q8C0E3 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.56□□□□□ -1.84
Trim47Q8C0E3 Gm33962-201ENSMUST00000182643 2592 ntBASIC3.56□□□□□ -1.84
Trim47Q8C0E3 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim47Q8C0E3 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim47Q8C0E3 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Trim47Q8C0E3 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim47Q8C0E3 Gm25878-201ENSMUST00000104327 93 ntBASIC3.55□□□□□ -1.84
Trim47Q8C0E3 Gm24375-201ENSMUST00000104397 132 ntBASIC3.55□□□□□ -1.84
Trim47Q8C0E3 Gm24559-201ENSMUST00000157519 121 ntBASIC3.55□□□□□ -1.84
Trim47Q8C0E3 Mir3094-201ENSMUST00000175121 64 ntBASIC3.55□□□□□ -1.84
Trim47Q8C0E3 Gm38311-201ENSMUST00000192945 165 ntBASIC3.55□□□□□ -1.84
Trim47Q8C0E3 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim47Q8C0E3 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim47Q8C0E3 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim47Q8C0E3 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim47Q8C0E3 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim47Q8C0E3 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim47Q8C0E3 Gm22772-201ENSMUST00000104451 121 ntBASIC3.54□□□□□ -1.84
Trim47Q8C0E3 Gm25539-201ENSMUST00000116886 122 ntBASIC3.54□□□□□ -1.84
Trim47Q8C0E3 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.54□□□□□ -1.84
Trim47Q8C0E3 Gm22306-201ENSMUST00000082692 107 ntBASIC3.54□□□□□ -1.84
Trim47Q8C0E3 Gm24977-201ENSMUST00000083106 163 ntBASIC3.54□□□□□ -1.84
Trim47Q8C0E3 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim47Q8C0E3 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim47Q8C0E3 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Trim47Q8C0E3 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim47Q8C0E3 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Trim47Q8C0E3 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.53□□□□□ -1.84
Trim47Q8C0E3 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim47Q8C0E3 Gm23791-201ENSMUST00000122553 293 ntBASIC3.53□□□□□ -1.84
Trim47Q8C0E3 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.53□□□□□ -1.84
Trim47Q8C0E3 Gm14389-201ENSMUST00000140453 241 ntBASIC3.53□□□□□ -1.84
Trim47Q8C0E3 Gm22319-201ENSMUST00000157147 122 ntBASIC3.53□□□□□ -1.84
Trim47Q8C0E3 Gm20672-201ENSMUST00000176605 261 ntBASIC3.53□□□□□ -1.84
Trim47Q8C0E3 Gm22972-201ENSMUST00000083297 131 ntBASIC3.53□□□□□ -1.84
Trim47Q8C0E3 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC3.53□□□□□ -1.84
Trim47Q8C0E3 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim47Q8C0E3 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.52□□□□□ -1.85
Trim47Q8C0E3 Gm25771-201ENSMUST00000158565 144 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 133.5 ms