Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm6802-202ENSMUST00000186566 126 ntBASIC4.27□□□□□ -1.73
Trim35Q8C006 Gm24038-201ENSMUST00000082872 159 ntBASIC4.27□□□□□ -1.73
Trim35Q8C006 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim35Q8C006 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim35Q8C006 Gm15466-201ENSMUST00000122299 333 ntBASIC4.26□□□□□ -1.73
Trim35Q8C006 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.26□□□□□ -1.73
Trim35Q8C006 Gm45031-201ENSMUST00000206800 288 ntBASIC4.26□□□□□ -1.73
Trim35Q8C006 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Trim35Q8C006 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim35Q8C006 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Trim35Q8C006 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Trim35Q8C006 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim35Q8C006 Gm26473-201ENSMUST00000116763 127 ntBASIC4.25□□□□□ -1.73
Trim35Q8C006 Gm14282-201ENSMUST00000119484 240 ntBASIC4.25□□□□□ -1.73
Trim35Q8C006 Gm11857-201ENSMUST00000119817 324 ntBASIC4.25□□□□□ -1.73
Trim35Q8C006 Gm25619-201ENSMUST00000122621 104 ntBASIC4.25□□□□□ -1.73
Trim35Q8C006 Gm10059-201ENSMUST00000131139 171 ntBASIC4.25□□□□□ -1.73
Trim35Q8C006 Gm25488-201ENSMUST00000158728 118 ntBASIC4.25□□□□□ -1.73
Trim35Q8C006 Gm20672-201ENSMUST00000176605 261 ntBASIC4.25□□□□□ -1.73
Trim35Q8C006 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim35Q8C006 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim35Q8C006 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim35Q8C006 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Trim35Q8C006 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.25□□□□□ -1.73
Trim35Q8C006 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim35Q8C006 Gm44560-201ENSMUST00000207816 3115 ntBASIC4.24□□□□□ -1.73
Trim35Q8C006 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Trim35Q8C006 Gm42585-201ENSMUST00000198731 4020 ntBASIC4.24□□□□□ -1.73
Trim35Q8C006 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim35Q8C006 Mir105-201ENSMUST00000104655 80 ntBASIC4.24□□□□□ -1.73
Trim35Q8C006 Gm26259-201ENSMUST00000104778 97 ntBASIC4.24□□□□□ -1.73
Trim35Q8C006 Gm11566-201ENSMUST00000118550 203 ntBASIC4.24□□□□□ -1.73
Trim35Q8C006 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim35Q8C006 Gm43521-201ENSMUST00000197838 255 ntBASIC4.24□□□□□ -1.73
Trim35Q8C006 Gm43107-201ENSMUST00000198729 255 ntBASIC4.24□□□□□ -1.73
Trim35Q8C006 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.24□□□□□ -1.73
Trim35Q8C006 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC4.24□□□□□ -1.73
Trim35Q8C006 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.24□□□□□ -1.73
Trim35Q8C006 Mir28a-201ENSMUST00000083560 86 ntBASIC4.24□□□□□ -1.73
Trim35Q8C006 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim35Q8C006 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim35Q8C006 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim35Q8C006 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim35Q8C006 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim35Q8C006 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim35Q8C006 Gm23960-201ENSMUST00000157206 131 ntBASIC4.23□□□□□ -1.73
Trim35Q8C006 Gm22211-201ENSMUST00000158097 156 ntBASIC4.23□□□□□ -1.73
Trim35Q8C006 Mir6960-201ENSMUST00000183449 61 ntBASIC4.23□□□□□ -1.73
Trim35Q8C006 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim35Q8C006 AC157602.1-201ENSMUST00000197446 105 ntBASIC4.23□□□□□ -1.73
Trim35Q8C006 AC168056.1-201ENSMUST00000225270 180 ntBASIC4.23□□□□□ -1.73
Trim35Q8C006 Gm25855-201ENSMUST00000082787 72 ntBASIC4.23□□□□□ -1.73
Trim35Q8C006 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.23□□□□□ -1.73
Trim35Q8C006 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim35Q8C006 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.23□□□□□ -1.73
Trim35Q8C006 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Trim35Q8C006 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.22□□□□□ -1.73
Trim35Q8C006 Gm22472-201ENSMUST00000104115 134 ntBASIC4.22□□□□□ -1.73
Trim35Q8C006 Gm23789-201ENSMUST00000122536 301 ntBASIC4.22□□□□□ -1.73
Trim35Q8C006 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim35Q8C006 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.22□□□□□ -1.73
Trim35Q8C006 Gm27718-201ENSMUST00000183721 86 ntBASIC4.22□□□□□ -1.73
Trim35Q8C006 Mir6899-201ENSMUST00000184798 64 ntBASIC4.22□□□□□ -1.73
Trim35Q8C006 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.22□□□□□ -1.73
Trim35Q8C006 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim35Q8C006 Snord118-201ENSMUST00000082965 135 ntBASIC4.22□□□□□ -1.73
Trim35Q8C006 Snord22-201ENSMUST00000083153 126 ntBASIC4.22□□□□□ -1.73
Trim35Q8C006 Gm26123-201ENSMUST00000083363 135 ntBASIC4.22□□□□□ -1.73
Trim35Q8C006 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim35Q8C006 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Trim35Q8C006 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim35Q8C006 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim35Q8C006 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Trim35Q8C006 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim35Q8C006 Gm15654-201ENSMUST00000152660 300 ntBASIC4.21□□□□□ -1.74
Trim35Q8C006 Gm24880-201ENSMUST00000158776 85 ntBASIC4.21□□□□□ -1.74
Trim35Q8C006 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim35Q8C006 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim35Q8C006 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Trim35Q8C006 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.2□□□□□ -1.74
Trim35Q8C006 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim35Q8C006 Gm23900-201ENSMUST00000157569 108 ntBASIC4.2□□□□□ -1.74
Trim35Q8C006 Gm24898-201ENSMUST00000158133 106 ntBASIC4.2□□□□□ -1.74
Trim35Q8C006 Gm23072-201ENSMUST00000158243 123 ntBASIC4.2□□□□□ -1.74
Trim35Q8C006 Gm26359-201ENSMUST00000158873 101 ntBASIC4.2□□□□□ -1.74
Trim35Q8C006 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim35Q8C006 Gm23928-201ENSMUST00000082469 145 ntBASIC4.2□□□□□ -1.74
Trim35Q8C006 Gm23510-201ENSMUST00000083083 163 ntBASIC4.2□□□□□ -1.74
Trim35Q8C006 Mir383-201ENSMUST00000083523 70 ntBASIC4.2□□□□□ -1.74
Trim35Q8C006 AC158979.1-201ENSMUST00000223594 2252 ntBASIC4.19□□□□□ -1.74
Trim35Q8C006 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.19□□□□□ -1.74
Trim35Q8C006 Mir487b-201ENSMUST00000102265 82 ntBASIC4.19□□□□□ -1.74
Trim35Q8C006 Gm24544-201ENSMUST00000103862 110 ntBASIC4.19□□□□□ -1.74
Trim35Q8C006 Gm16328-201ENSMUST00000126985 196 ntBASIC4.19□□□□□ -1.74
Trim35Q8C006 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim35Q8C006 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim35Q8C006 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim35Q8C006 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim35Q8C006 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim35Q8C006 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms