Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm37089-201ENSMUST00000195616 129 ntBASIC2.16□□□□□ -2.06
Ddx58Q6Q899 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.16□□□□□ -2.06
Ddx58Q6Q899 Gm23370-201ENSMUST00000199545 130 ntBASIC2.16□□□□□ -2.06
Ddx58Q6Q899 Gm24805-201ENSMUST00000082931 104 ntBASIC2.16□□□□□ -2.06
Ddx58Q6Q899 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
Ddx58Q6Q899 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.15□□□□□ -2.07
Ddx58Q6Q899 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.15□□□□□ -2.07
Ddx58Q6Q899 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Ddx58Q6Q899 Gm25938-201ENSMUST00000104139 166 ntBASIC2.15□□□□□ -2.07
Ddx58Q6Q899 Gm22450-201ENSMUST00000179641 107 ntBASIC2.15□□□□□ -2.07
Ddx58Q6Q899 Gm25473-201ENSMUST00000180191 107 ntBASIC2.15□□□□□ -2.07
Ddx58Q6Q899 Gm26864-201ENSMUST00000181346 156 ntBASIC2.15□□□□□ -2.07
Ddx58Q6Q899 Gm29140-201ENSMUST00000190187 476 ntBASIC2.15□□□□□ -2.07
Ddx58Q6Q899 Gm24151-201ENSMUST00000082758 141 ntBASIC2.15□□□□□ -2.07
Ddx58Q6Q899 Gm24856-201ENSMUST00000082809 107 ntBASIC2.15□□□□□ -2.07
Ddx58Q6Q899 Snora3-201ENSMUST00000083082 132 ntBASIC2.15□□□□□ -2.07
Ddx58Q6Q899 Gm26071-201ENSMUST00000083261 107 ntBASIC2.15□□□□□ -2.07
Ddx58Q6Q899 Gm24521-201ENSMUST00000083958 107 ntBASIC2.15□□□□□ -2.07
Ddx58Q6Q899 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.15□□□□□ -2.07
Ddx58Q6Q899 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.14□□□□□ -2.07
Ddx58Q6Q899 Gm23656-201ENSMUST00000122626 112 ntBASIC2.14□□□□□ -2.07
Ddx58Q6Q899 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ddx58Q6Q899 Gm23536-201ENSMUST00000157541 134 ntBASIC2.14□□□□□ -2.07
Ddx58Q6Q899 Gm25664-201ENSMUST00000157697 107 ntBASIC2.14□□□□□ -2.07
Ddx58Q6Q899 Gm22556-201ENSMUST00000157803 100 ntBASIC2.14□□□□□ -2.07
Ddx58Q6Q899 Gm24572-201ENSMUST00000175505 88 ntBASIC2.14□□□□□ -2.07
Ddx58Q6Q899 Gm37693-201ENSMUST00000194562 234 ntBASIC2.14□□□□□ -2.07
Ddx58Q6Q899 AC165092.3-201ENSMUST00000223602 282 ntBASIC2.14□□□□□ -2.07
Ddx58Q6Q899 Gm24042-201ENSMUST00000083114 103 ntBASIC2.14□□□□□ -2.07
Ddx58Q6Q899 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ddx58Q6Q899 Gm15067-201ENSMUST00000119534 156 ntBASIC2.13□□□□□ -2.07
Ddx58Q6Q899 Gm14792-201ENSMUST00000119725 258 ntBASIC2.13□□□□□ -2.07
Ddx58Q6Q899 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.13□□□□□ -2.07
Ddx58Q6Q899 Gm27898-201ENSMUST00000183987 80 ntBASIC2.13□□□□□ -2.07
Ddx58Q6Q899 Mir6419-201ENSMUST00000184784 113 ntBASIC2.13□□□□□ -2.07
Ddx58Q6Q899 Gm28921-201ENSMUST00000190219 378 ntBASIC2.13□□□□□ -2.07
Ddx58Q6Q899 Gm5010-201ENSMUST00000213131 260 ntBASIC2.13□□□□□ -2.07
Ddx58Q6Q899 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.13□□□□□ -2.07
Ddx58Q6Q899 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.13□□□□□ -2.07
Ddx58Q6Q899 Gm22358-201ENSMUST00000082877 122 ntBASIC2.13□□□□□ -2.07
Ddx58Q6Q899 Mir148b-201ENSMUST00000083626 97 ntBASIC2.13□□□□□ -2.07
Ddx58Q6Q899 Gm25188-201ENSMUST00000083913 122 ntBASIC2.13□□□□□ -2.07
Ddx58Q6Q899 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.12□□□□□ -2.07
Ddx58Q6Q899 Gm14674-201ENSMUST00000117816 342 ntBASIC2.12□□□□□ -2.07
Ddx58Q6Q899 Gm14937-201ENSMUST00000119709 208 ntBASIC2.12□□□□□ -2.07
Ddx58Q6Q899 Gm14491-201ENSMUST00000121919 199 ntBASIC2.12□□□□□ -2.07
Ddx58Q6Q899 Gm26287-201ENSMUST00000158887 81 ntBASIC2.12□□□□□ -2.07
Ddx58Q6Q899 Mir7683-201ENSMUST00000183842 61 ntBASIC2.12□□□□□ -2.07
Ddx58Q6Q899 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC2.12□□□□□ -2.07
Ddx58Q6Q899 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.12□□□□□ -2.07
Ddx58Q6Q899 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Ddx58Q6Q899 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.12□□□□□ -2.07
Ddx58Q6Q899 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.12□□□□□ -2.07
Ddx58Q6Q899 Gm25141-201ENSMUST00000083177 107 ntBASIC2.12□□□□□ -2.07
Ddx58Q6Q899 Gm25513-201ENSMUST00000083861 162 ntBASIC2.12□□□□□ -2.07
Ddx58Q6Q899 Gm10360-201ENSMUST00000097219 272 ntBASIC2.12□□□□□ -2.07
Ddx58Q6Q899 Gm22784-201ENSMUST00000104088 132 ntBASIC2.11□□□□□ -2.07
Ddx58Q6Q899 Gm15162-201ENSMUST00000119325 283 ntBASIC2.11□□□□□ -2.07
Ddx58Q6Q899 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.11□□□□□ -2.07
Ddx58Q6Q899 U6.1-201ENSMUST00000157443 101 ntBASIC2.11□□□□□ -2.07
Ddx58Q6Q899 Gm25362-201ENSMUST00000158854 105 ntBASIC2.11□□□□□ -2.07
Ddx58Q6Q899 Gm24668-201ENSMUST00000158935 104 ntBASIC2.11□□□□□ -2.07
Ddx58Q6Q899 Mir6379-201ENSMUST00000183392 115 ntBASIC2.11□□□□□ -2.07
Ddx58Q6Q899 Gm27511-201ENSMUST00000183502 127 ntBASIC2.11□□□□□ -2.07
Ddx58Q6Q899 Mir6540-201ENSMUST00000184886 108 ntBASIC2.11□□□□□ -2.07
Ddx58Q6Q899 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.11□□□□□ -2.07
Ddx58Q6Q899 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.11□□□□□ -2.07
Ddx58Q6Q899 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.11□□□□□ -2.07
Ddx58Q6Q899 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.11□□□□□ -2.07
Ddx58Q6Q899 Gm25636-201ENSMUST00000082666 133 ntBASIC2.11□□□□□ -2.07
Ddx58Q6Q899 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.11□□□□□ -2.07
Ddx58Q6Q899 Gm24423-201ENSMUST00000101982 106 ntBASIC2.1□□□□□ -2.07
Ddx58Q6Q899 Mir301b-201ENSMUST00000102333 97 ntBASIC2.1□□□□□ -2.07
Ddx58Q6Q899 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ddx58Q6Q899 Mir3096-201ENSMUST00000116685 71 ntBASIC2.1□□□□□ -2.07
Ddx58Q6Q899 Mir1951-201ENSMUST00000157981 89 ntBASIC2.1□□□□□ -2.07
Ddx58Q6Q899 Gm24076-201ENSMUST00000158179 94 ntBASIC2.1□□□□□ -2.07
Ddx58Q6Q899 Gm23181-201ENSMUST00000158685 110 ntBASIC2.1□□□□□ -2.07
Ddx58Q6Q899 Gm22665-201ENSMUST00000158720 275 ntBASIC2.1□□□□□ -2.07
Ddx58Q6Q899 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.1□□□□□ -2.07
Ddx58Q6Q899 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.1□□□□□ -2.07
Ddx58Q6Q899 Gm24984-201ENSMUST00000104454 133 ntBASIC2.09□□□□□ -2.07
Ddx58Q6Q899 Gm25333-201ENSMUST00000158035 246 ntBASIC2.09□□□□□ -2.07
Ddx58Q6Q899 Gm26022-201ENSMUST00000158663 108 ntBASIC2.09□□□□□ -2.07
Ddx58Q6Q899 Mir3057-201ENSMUST00000175040 91 ntBASIC2.09□□□□□ -2.07
Ddx58Q6Q899 Gm25615-201ENSMUST00000177836 94 ntBASIC2.09□□□□□ -2.07
Ddx58Q6Q899 Gm25024-201ENSMUST00000179667 104 ntBASIC2.09□□□□□ -2.07
Ddx58Q6Q899 Gm29014-201ENSMUST00000191422 326 ntBASIC2.09□□□□□ -2.07
Ddx58Q6Q899 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.09□□□□□ -2.07
Ddx58Q6Q899 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.09□□□□□ -2.07
Ddx58Q6Q899 Gm14846-201ENSMUST00000121868 216 ntBASIC2.08□□□□□ -2.08
Ddx58Q6Q899 Gm22097-201ENSMUST00000157929 278 ntBASIC2.08□□□□□ -2.08
Ddx58Q6Q899 Gm27545-201ENSMUST00000184755 202 ntBASIC2.08□□□□□ -2.08
Ddx58Q6Q899 Gm27332-201ENSMUST00000184893 112 ntBASIC2.08□□□□□ -2.08
Ddx58Q6Q899 Gm29308-201ENSMUST00000188863 315 ntBASIC2.08□□□□□ -2.08
Ddx58Q6Q899 Gm18433-201ENSMUST00000192747 197 ntBASIC2.08□□□□□ -2.08
Ddx58Q6Q899 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ddx58Q6Q899 Gm22421-201ENSMUST00000083058 107 ntBASIC2.08□□□□□ -2.08
Ddx58Q6Q899 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Ddx58Q6Q899 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms