Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Snora3-201ENSMUST00000083082 132 ntBASIC2.01□□□□□ -2.09
Smarca1Q6PGB8 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Smarca1Q6PGB8 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Smarca1Q6PGB8 Gm23469-201ENSMUST00000157131 104 ntBASIC2□□□□□ -2.09
Smarca1Q6PGB8 Gm28912-201ENSMUST00000189001 234 ntBASIC2□□□□□ -2.09
Smarca1Q6PGB8 Gm23370-201ENSMUST00000199545 130 ntBASIC2□□□□□ -2.09
Smarca1Q6PGB8 Gm44977-201ENSMUST00000205283 420 ntBASIC2□□□□□ -2.09
Smarca1Q6PGB8 Gm24151-201ENSMUST00000082758 141 ntBASIC2□□□□□ -2.09
Smarca1Q6PGB8 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Smarca1Q6PGB8 Gm43473-201ENSMUST00000200442 5997 ntBASIC2□□□□□ -2.09
Smarca1Q6PGB8 Mir301b-201ENSMUST00000102333 97 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Mir875-201ENSMUST00000104698 78 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Gm23656-201ENSMUST00000122626 112 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Gm24635-201ENSMUST00000122712 128 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Gm25051-201ENSMUST00000158602 249 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Mir7679-201ENSMUST00000183379 63 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Mir6379-201ENSMUST00000183392 115 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Gm29308-201ENSMUST00000188863 315 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Gm29140-201ENSMUST00000190187 476 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Gm37089-201ENSMUST00000195616 129 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Gm25357-201ENSMUST00000082745 72 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Gm23451-201ENSMUST00000083328 122 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 Gm25513-201ENSMUST00000083861 162 ntBASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
Smarca1Q6PGB8 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Gm14792-201ENSMUST00000119725 258 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Gm14883-201ENSMUST00000120179 157 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Gm25914-201ENSMUST00000157618 153 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Gm24783-201ENSMUST00000157639 100 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Gm25333-201ENSMUST00000158035 246 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Gm24076-201ENSMUST00000158179 94 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Gm25362-201ENSMUST00000158854 105 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Gm25615-201ENSMUST00000177836 94 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Gm23003-201ENSMUST00000179948 107 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Mir8116-201ENSMUST00000184134 97 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Gm45365-201ENSMUST00000209489 256 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Gm25204-201ENSMUST00000082843 106 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Gm24805-201ENSMUST00000082931 104 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Gm23100-201ENSMUST00000083455 141 ntBASIC1.98□□□□□ -2.09
Smarca1Q6PGB8 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.97□□□□□ -2.09
Smarca1Q6PGB8 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.97□□□□□ -2.09
Smarca1Q6PGB8 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.97□□□□□ -2.09
Smarca1Q6PGB8 Mir1951-201ENSMUST00000157981 89 ntBASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 Gm26287-201ENSMUST00000158887 81 ntBASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 Gm22450-201ENSMUST00000179641 107 ntBASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 Gm25473-201ENSMUST00000180191 107 ntBASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 Mir6540-201ENSMUST00000184886 108 ntBASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 Gm24856-201ENSMUST00000082809 107 ntBASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 Gm24204-201ENSMUST00000082950 107 ntBASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 Gm26071-201ENSMUST00000083261 107 ntBASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 Gm24521-201ENSMUST00000083958 107 ntBASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
Smarca1Q6PGB8 Gm23536-201ENSMUST00000157541 134 ntBASIC1.95□□□□□ -2.1
Smarca1Q6PGB8 Gm26022-201ENSMUST00000158663 108 ntBASIC1.95□□□□□ -2.1
Smarca1Q6PGB8 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.95□□□□□ -2.1
Smarca1Q6PGB8 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.95□□□□□ -2.1
Smarca1Q6PGB8 Mir6419-201ENSMUST00000184784 113 ntBASIC1.95□□□□□ -2.1
Smarca1Q6PGB8 Gm37889-201ENSMUST00000194174 251 ntBASIC1.95□□□□□ -2.1
Smarca1Q6PGB8 Gm38019-201ENSMUST00000195133 380 ntBASIC1.95□□□□□ -2.1
Smarca1Q6PGB8 Gm44959-201ENSMUST00000209127 231 ntBASIC1.95□□□□□ -2.1
Smarca1Q6PGB8 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.95□□□□□ -2.1
Smarca1Q6PGB8 Mir155-201ENSMUST00000083463 65 ntBASIC1.95□□□□□ -2.1
Smarca1Q6PGB8 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Smarca1Q6PGB8 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.94□□□□□ -2.1
Smarca1Q6PGB8 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.94□□□□□ -2.1
Smarca1Q6PGB8 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.94□□□□□ -2.1
Smarca1Q6PGB8 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.94□□□□□ -2.1
Smarca1Q6PGB8 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 Gm24423-201ENSMUST00000101982 106 ntBASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 Gm25832-201ENSMUST00000104140 130 ntBASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 Gm14001-201ENSMUST00000118847 247 ntBASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 U6.1-201ENSMUST00000157443 101 ntBASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 Gm25035-201ENSMUST00000175414 77 ntBASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 Gm23714-201ENSMUST00000179259 105 ntBASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 Mir6995-201ENSMUST00000183658 71 ntBASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 Gm19855-201ENSMUST00000210145 249 ntBASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 Gm24042-201ENSMUST00000083114 103 ntBASIC1.93□□□□□ -2.1
Smarca1Q6PGB8 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Smarca1Q6PGB8 Gm23836-201ENSMUST00000104434 129 ntBASIC1.92□□□□□ -2.1
Smarca1Q6PGB8 Gm13711-201ENSMUST00000119708 453 ntBASIC1.92□□□□□ -2.1
Smarca1Q6PGB8 Gm23182-201ENSMUST00000158688 135 ntBASIC1.92□□□□□ -2.1
Smarca1Q6PGB8 Mir3057-201ENSMUST00000175040 91 ntBASIC1.92□□□□□ -2.1
Smarca1Q6PGB8 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 Gm14674-201ENSMUST00000117816 342 ntBASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 Gm15067-201ENSMUST00000119534 156 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 214.7 ms