Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm26360-201ENSMUST00000158872 103 ntBASIC2.63□□□□□ -1.99
Shkbp1Q6P7W2 Gm38311-201ENSMUST00000192945 165 ntBASIC2.63□□□□□ -1.99
Shkbp1Q6P7W2 Gm43602-201ENSMUST00000196772 300 ntBASIC2.63□□□□□ -1.99
Shkbp1Q6P7W2 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.63□□□□□ -1.99
Shkbp1Q6P7W2 Gm22509-201ENSMUST00000082775 107 ntBASIC2.63□□□□□ -1.99
Shkbp1Q6P7W2 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.63□□□□□ -1.99
Shkbp1Q6P7W2 Gm24698-201ENSMUST00000083883 130 ntBASIC2.63□□□□□ -1.99
Shkbp1Q6P7W2 Snora2b-201ENSMUST00000084005 137 ntBASIC2.63□□□□□ -1.99
Shkbp1Q6P7W2 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.63□□□□□ -1.99
Shkbp1Q6P7W2 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Shkbp1Q6P7W2 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.62□□□□□ -1.99
Shkbp1Q6P7W2 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Shkbp1Q6P7W2 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
Shkbp1Q6P7W2 Gm26015-201ENSMUST00000104402 125 ntBASIC2.62□□□□□ -1.99
Shkbp1Q6P7W2 Gm22011-201ENSMUST00000158790 123 ntBASIC2.62□□□□□ -1.99
Shkbp1Q6P7W2 Mir28b-201ENSMUST00000175399 80 ntBASIC2.62□□□□□ -1.99
Shkbp1Q6P7W2 Gm27527-201ENSMUST00000183903 99 ntBASIC2.62□□□□□ -1.99
Shkbp1Q6P7W2 Gm27330-201ENSMUST00000184689 132 ntBASIC2.62□□□□□ -1.99
Shkbp1Q6P7W2 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.62□□□□□ -1.99
Shkbp1Q6P7W2 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Shkbp1Q6P7W2 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Shkbp1Q6P7W2 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Gm26081-201ENSMUST00000104068 132 ntBASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Gm24232-201ENSMUST00000104314 132 ntBASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Gm13560-201ENSMUST00000121865 329 ntBASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Gm23718-201ENSMUST00000157350 307 ntBASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Gm22227-201ENSMUST00000157356 259 ntBASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Gm23644-201ENSMUST00000157856 77 ntBASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Gm22612-201ENSMUST00000158293 101 ntBASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Gm24736-201ENSMUST00000158862 130 ntBASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Gm37116-201ENSMUST00000195161 147 ntBASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Gm6030-201ENSMUST00000078768 402 ntBASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 mt-Tt-201ENSMUST00000082422 67 ntBASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Gm23247-201ENSMUST00000083373 107 ntBASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Shkbp1Q6P7W2 Gm22678-201ENSMUST00000116974 101 ntBASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Gm23434-201ENSMUST00000157179 100 ntBASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Gm22666-201ENSMUST00000158717 164 ntBASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Mir6402-201ENSMUST00000183406 80 ntBASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Mir1291-201ENSMUST00000199842 117 ntBASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 mt-Tf-201ENSMUST00000082387 68 ntBASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Gm25797-201ENSMUST00000082640 107 ntBASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Snord61-201ENSMUST00000083176 71 ntBASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Snora34-201ENSMUST00000083402 138 ntBASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.6□□□□□ -1.99
Shkbp1Q6P7W2 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Gm22270-201ENSMUST00000104034 132 ntBASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Gm22105-201ENSMUST00000116734 116 ntBASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Gm24595-201ENSMUST00000122501 110 ntBASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Gm24896-201ENSMUST00000122741 135 ntBASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Gm23665-201ENSMUST00000158054 62 ntBASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Gm24210-201ENSMUST00000158263 133 ntBASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Gm22858-201ENSMUST00000174972 76 ntBASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Gm25470-201ENSMUST00000175576 111 ntBASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Gm23303-201ENSMUST00000082714 152 ntBASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Gm22576-201ENSMUST00000083733 104 ntBASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Shkbp1Q6P7W2 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Shkbp1Q6P7W2 Gm25485-201ENSMUST00000104120 132 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 Gm11285-201ENSMUST00000118443 322 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 Gm12213-201ENSMUST00000119924 353 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 Gm16186-201ENSMUST00000120132 216 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 Gm16533-201ENSMUST00000140035 228 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 Gm24277-201ENSMUST00000158661 104 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 Gm27399-201ENSMUST00000184250 78 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 Gm29658-201ENSMUST00000185404 230 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 Mir6925-201ENSMUST00000197857 70 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 Gm24030-201ENSMUST00000083931 164 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.58□□□□□ -2
Shkbp1Q6P7W2 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.57□□□□□ -2
Shkbp1Q6P7W2 Gm23600-201ENSMUST00000157260 71 ntBASIC2.57□□□□□ -2
Shkbp1Q6P7W2 Gm25882-201ENSMUST00000157784 85 ntBASIC2.57□□□□□ -2
Shkbp1Q6P7W2 Gm29604-201ENSMUST00000187176 163 ntBASIC2.57□□□□□ -2
Shkbp1Q6P7W2 Gm38364-201ENSMUST00000191814 179 ntBASIC2.57□□□□□ -2
Shkbp1Q6P7W2 Gm37281-201ENSMUST00000192412 439 ntBASIC2.57□□□□□ -2
Shkbp1Q6P7W2 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.57□□□□□ -2
Shkbp1Q6P7W2 Gm44459-201ENSMUST00000203926 160 ntBASIC2.57□□□□□ -2
Shkbp1Q6P7W2 Gm24977-201ENSMUST00000083106 163 ntBASIC2.57□□□□□ -2
Shkbp1Q6P7W2 Gm22972-201ENSMUST00000083297 131 ntBASIC2.57□□□□□ -2
Shkbp1Q6P7W2 Gm23040-201ENSMUST00000083869 163 ntBASIC2.57□□□□□ -2
Shkbp1Q6P7W2 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Shkbp1Q6P7W2 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 219.8 ms